RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 KCNIP4Q6PIL6 250 aa6.35□□□□□ -1.39
NUDCD3-208ENST00000480209 BTF3L4Q96K17 158 aa6.35□□□□□ -1.39
NUDCD3-208ENST00000480209 EDA2RQ9HAV5 297 aa6.35□□□□□ -1.39
NUDCD3-208ENST00000480209 TRAV9-1A0A075B6T8 112 aa6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 IGHV3-53P01767 116 aa6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 CRYGDP07320 174 aa6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 NHLRC4P0CG21 123 aaPredicted RBP6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 SPART-AS1P0CW21 52 aa6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 EVI2AP22794 236 aa6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 S100PP25815 95 aa6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 CAMPP49913 170 aa6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 NANOS2P60321 138 aaKnown RBP6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 HBBP68871 147 aa6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 C12orf74Q32Q52 190 aa6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 ATP5L2Q7Z4Y8 100 aa6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 GATD1Q8NB37 220 aa6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 SYT8Q8NBV8 401 aa6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 ZNF479Q96JC4 524 aa6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 AP1S3Q96PC3 154 aa6.34□□□□□ -1.39
NUDCD3-208ENST00000480209 TRBV24-1A0A075B6N3 115 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 IGHV3-73A0A0B4J1V6 119 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 COLCA2A8K830 154 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 GAS8-AS1O95177 125 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 HOXA5P20719 270 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 DAD1P61803 113 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 RIGQ13278 110 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 PIK3CD-AS1Q5SR53 167 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 FAM74A4Q5TZK3 123 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 TMEM136Q6ZRR5 245 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 Q6ZSN1 163 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 Q6ZTC4 211 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 AMN1Q8IY45 258 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 C14orf178Q8N769 122 aaPredicted RBP6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 BORCS7Q96B45 105 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 RNF185Q96GF1 192 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 U3KQK5 164 aa6.33□□□□□ -1.4
NUDCD3-208ENST00000480209 TRGV2A0A075B6R0 118 aa6.32□□□□□ -1.4
NUDCD3-208ENST00000480209 TRAV26-2A0A0B4J265 109 aa6.32□□□□□ -1.4
NUDCD3-208ENST00000480209 TRAV4A0A0B4J268 109 aa6.32□□□□□ -1.4
NUDCD3-208ENST00000480209 SLAQ13239 276 aa6.32□□□□□ -1.4
NUDCD3-208ENST00000480209 C11orf45Q8TAV5 145 aa6.32□□□□□ -1.4
NUDCD3-208ENST00000480209 FAM210BQ96KR6 192 aa6.32□□□□□ -1.4
NUDCD3-208ENST00000480209 C18orf15Q96N68 181 aa6.32□□□□□ -1.4
NUDCD3-208ENST00000480209 NDUFAF3Q9BU61 184 aa6.32□□□□□ -1.4
NUDCD3-208ENST00000480209 A0A1B0GW15 77 aa6.31□□□□□ -1.4
NUDCD3-208ENST00000480209 A8MWV9 139 aa6.31□□□□□ -1.4
NUDCD3-208ENST00000480209 MGPP08493 103 aa6.31□□□□□ -1.4
NUDCD3-208ENST00000480209 TRGC1P0CF51 173 aa6.31□□□□□ -1.4
NUDCD3-208ENST00000480209 P0DMU3 169 aa6.31□□□□□ -1.4
NUDCD3-208ENST00000480209 FAM231AP0DMU4 169 aa6.31□□□□□ -1.4
NUDCD3-208ENST00000480209 FAM231CP0DMU5 169 aa6.31□□□□□ -1.4
NUDCD3-208ENST00000480209 FHL2Q14192 279 aa6.31□□□□□ -1.4
NUDCD3-208ENST00000480209 OR4C5Q8NGB2 326 aa6.31□□□□□ -1.4
NUDCD3-208ENST00000480209 TMEM191AQ9H0A3 160 aa6.31□□□□□ -1.4
NUDCD3-208ENST00000480209 DPH3P1Q9H4G8 78 aa6.31□□□□□ -1.4
NUDCD3-208ENST00000480209 Q9UF83 564 aa6.31□□□□□ -1.4
NUDCD3-208ENST00000480209 CSMD3Q7Z407 3707 aa6.31□□□□□ -1.4
NUDCD3-208ENST00000480209 TGP01266 2768 aa6.3□□□□□ -1.4
NUDCD3-208ENST00000480209 TEX48A0A1B0GUV7 120 aa6.3□□□□□ -1.4
NUDCD3-208ENST00000480209 SMKR1H3BMG3 65 aa6.3□□□□□ -1.4
NUDCD3-208ENST00000480209 NCR2O95944 276 aa6.3□□□□□ -1.4
NUDCD3-208ENST00000480209 GATA1P15976 413 aaPredicted RBP6.3□□□□□ -1.4
NUDCD3-208ENST00000480209 RAB4AP20338 218 aa6.3□□□□□ -1.4
NUDCD3-208ENST00000480209 ZNF56Q15929 161 aa6.3□□□□□ -1.4
NUDCD3-208ENST00000480209 MRPL51Q4U2R6 128 aaKnown RBP6.3□□□□□ -1.4
NUDCD3-208ENST00000480209 SUMO4Q6EEV6 95 aa6.3□□□□□ -1.4
NUDCD3-208ENST00000480209 RASL11AQ6T310 242 aa6.3□□□□□ -1.4
NUDCD3-208ENST00000480209 LOC100131303A0A0U1RQF7 123 aa6.29□□□□□ -1.4
NUDCD3-208ENST00000480209 RHODO00212 210 aa6.29□□□□□ -1.4
NUDCD3-208ENST00000480209 ATP5G1P05496 136 aa6.29□□□□□ -1.4
NUDCD3-208ENST00000480209 HTN3P15516 51 aa6.29□□□□□ -1.4
NUDCD3-208ENST00000480209 RAB4BP61018 213 aa6.29□□□□□ -1.4
NUDCD3-208ENST00000480209 FAM104BQ5XKR9 115 aa6.29□□□□□ -1.4
NUDCD3-208ENST00000480209 ZFP2Q6ZN57 461 aa6.29□□□□□ -1.4
NUDCD3-208ENST00000480209 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.29□□□□□ -1.4
NUDCD3-208ENST00000480209 GNB1LQ9BYB4 327 aa6.29□□□□□ -1.4
NUDCD3-208ENST00000480209 PHOX2AO14813 284 aa6.28□□□□□ -1.4
NUDCD3-208ENST00000480209 S100A8P05109 93 aa6.28□□□□□ -1.4
NUDCD3-208ENST00000480209 RAB5AP20339 215 aa6.28□□□□□ -1.4
NUDCD3-208ENST00000480209 RPS10P46783 165 aaKnown RBP6.28□□□□□ -1.4
NUDCD3-208ENST00000480209 KIAA1644Q3SXP7 199 aa6.28□□□□□ -1.4
NUDCD3-208ENST00000480209 SLC25A29Q8N8R3 303 aa6.28□□□□□ -1.4
NUDCD3-208ENST00000480209 RPL39LQ96EH5 51 aaKnown RBP6.28□□□□□ -1.4
NUDCD3-208ENST00000480209 VSIG2Q96IQ7 327 aa6.28□□□□□ -1.4
NUDCD3-208ENST00000480209 MRPL18Q9H0U6 180 aaKnown RBP6.28□□□□□ -1.4
NUDCD3-208ENST00000480209 STARD9Q9P2P6 4700 aa6.28□□□□□ -1.4
NUDCD3-208ENST00000480209 TRGV4A0A0C4DH28 118 aa6.27□□□□□ -1.41
NUDCD3-208ENST00000480209 A0A0J9YY99 117 aa6.27□□□□□ -1.41
NUDCD3-208ENST00000480209 F5H697 171 aa6.27□□□□□ -1.41
NUDCD3-208ENST00000480209 F5H768 121 aa6.27□□□□□ -1.41
NUDCD3-208ENST00000480209 M0QY20 66 aa6.27□□□□□ -1.41
NUDCD3-208ENST00000480209 HLA-DQA1P01909 254 aa6.27□□□□□ -1.41
NUDCD3-208ENST00000480209 SMIM17P0DL12 118 aa6.27□□□□□ -1.41
NUDCD3-208ENST00000480209 LINC00694P0DN24 101 aa6.27□□□□□ -1.41
NUDCD3-208ENST00000480209 CRYBA4P53673 196 aa6.27□□□□□ -1.41
NUDCD3-208ENST00000480209 FABP9Q0Z7S8 132 aa6.27□□□□□ -1.41
NUDCD3-208ENST00000480209 SMIM15Q7Z3B0 74 aa6.27□□□□□ -1.41
NUDCD3-208ENST00000480209 NRACQ8N912 160 aa6.27□□□□□ -1.41
NUDCD3-208ENST00000480209 TRAV26-1A0A087WT03 109 aa6.26□□□□□ -1.41
NUDCD3-208ENST00000480209 DEFB131BA0A096LNP1 70 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms