RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 SBSPONQ8IVN8 264 aa14.4□□□□□ -0.1
TNFRSF8-204ENST00000479933 DPH3P1Q9H4G8 78 aa14.4□□□□□ -0.1
TNFRSF8-204ENST00000479933 SPANXA1Q9NS26 97 aa14.4□□□□□ -0.1
TNFRSF8-204ENST00000479933 PHLDA3Q9Y5J5 127 aa14.4□□□□□ -0.1
TNFRSF8-204ENST00000479933 RAX2Q96IS3 184 aa14.39□□□□□ -0.11
TNFRSF8-204ENST00000479933 FOXC2Q99958 501 aa14.39□□□□□ -0.11
TNFRSF8-204ENST00000479933 WFDC3Q8IUB2 231 aa14.39□□□□□ -0.11
TNFRSF8-204ENST00000479933 TEX29Q8N6K0 151 aa14.39□□□□□ -0.11
TNFRSF8-204ENST00000479933 CARD19Q96LW7 228 aa14.39□□□□□ -0.11
TNFRSF8-204ENST00000479933 IGKV3-7A0A075B6H7 116 aa14.38□□□□□ -0.11
TNFRSF8-204ENST00000479933 TRAV26-2A0A0B4J265 109 aa14.38□□□□□ -0.11
TNFRSF8-204ENST00000479933 F6UB75 175 aa14.38□□□□□ -0.11
TNFRSF8-204ENST00000479933 K7EMI3 77 aa14.38□□□□□ -0.11
TNFRSF8-204ENST00000479933 HOXA3O43365 443 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF8-204ENST00000479933 TGFAP01135 160 aa14.38□□□□□ -0.11
TNFRSF8-204ENST00000479933 IGSF10Q6WRI0 2623 aa14.38□□□□□ -0.11
TNFRSF8-204ENST00000479933 MYOZ3Q8TDC0 251 aa14.38□□□□□ -0.11
TNFRSF8-204ENST00000479933 PRSS29PA6NIE9 313 aa14.38□□□□□ -0.11
TNFRSF8-204ENST00000479933 M0R381 172 aa14.38□□□□□ -0.11
TNFRSF8-204ENST00000479933 PLNP26678 52 aa14.38□□□□□ -0.11
TNFRSF8-204ENST00000479933 NHLRC4P0CG21 123 aaPredicted RBP14.37□□□□□ -0.11
TNFRSF8-204ENST00000479933 DEFB1P60022 68 aa14.37□□□□□ -0.11
TNFRSF8-204ENST00000479933 DCANP1Q8TF63 244 aa14.37□□□□□ -0.11
TNFRSF8-204ENST00000479933 SMIM2Q9BVW6 85 aa14.37□□□□□ -0.11
TNFRSF8-204ENST00000479933 KLLNB2CW77 178 aa14.36□□□□□ -0.11
TNFRSF8-204ENST00000479933 PPP1R17O96001 155 aa14.36□□□□□ -0.11
TNFRSF8-204ENST00000479933 ZNF688P0C7X2 276 aa14.36□□□□□ -0.11
TNFRSF8-204ENST00000479933 UBE2D3P61077 147 aa14.36□□□□□ -0.11
TNFRSF8-204ENST00000479933 UBE2D2P62837 147 aa14.36□□□□□ -0.11
TNFRSF8-204ENST00000479933 B5MCH6 92 aa14.36□□□□□ -0.11
TNFRSF8-204ENST00000479933 RHODO00212 210 aa14.36□□□□□ -0.11
TNFRSF8-204ENST00000479933 VPREB3Q9UKI3 123 aa14.36□□□□□ -0.11
TNFRSF8-204ENST00000479933 ORMDL2Q53FV1 153 aa14.35□□□□□ -0.11
TNFRSF8-204ENST00000479933 ODF3Q96PU9 254 aa14.35□□□□□ -0.11
TNFRSF8-204ENST00000479933 SPG11Q96JI7 2443 aa14.35□□□□□ -0.11
TNFRSF8-204ENST00000479933 USP9XQ93008 2570 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF8-204ENST00000479933 A0A087WX48 190 aa14.35□□□□□ -0.11
TNFRSF8-204ENST00000479933 M0QXV9 152 aa14.35□□□□□ -0.11
TNFRSF8-204ENST00000479933 NXPH4O95158 308 aa14.35□□□□□ -0.11
TNFRSF8-204ENST00000479933 SVEP1Q4LDE5 3571 aa14.35□□□□□ -0.11
TNFRSF8-204ENST00000479933 MYMXA0A1B0GTQ4 84 aa14.34□□□□□ -0.11
TNFRSF8-204ENST00000479933 FSHBP01225 129 aa14.34□□□□□ -0.11
TNFRSF8-204ENST00000479933 ELANEP08246 267 aa14.34□□□□□ -0.11
TNFRSF8-204ENST00000479933 UBE2D1P51668 147 aa14.34□□□□□ -0.11
TNFRSF8-204ENST00000479933 MRPL35Q9NZE8 188 aaKnown RBP14.34□□□□□ -0.11
TNFRSF8-204ENST00000479933 SUMO2P61956 95 aaKnown RBP14.33□□□□□ -0.11
TNFRSF8-204ENST00000479933 HERV-K104P63124 156 aa14.33□□□□□ -0.11
TNFRSF8-204ENST00000479933 FAM159AQ6UWV7 190 aa14.33□□□□□ -0.11
TNFRSF8-204ENST00000479933 TMEM160Q9NX00 188 aa14.33□□□□□ -0.11
TNFRSF8-204ENST00000479933 GNRH2O43555 120 aa14.33□□□□□ -0.12
TNFRSF8-204ENST00000479933 RNASE3P12724 160 aaKnown RBP14.33□□□□□ -0.12
TNFRSF8-204ENST00000479933 Q6Q795 121 aa14.33□□□□□ -0.12
TNFRSF8-204ENST00000479933 Q6YL49 198 aa14.33□□□□□ -0.12
TNFRSF8-204ENST00000479933 C14orf178Q8N769 122 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF8-204ENST00000479933 TRBV20-1A0A075B6N2 111 aa14.32□□□□□ -0.12
TNFRSF8-204ENST00000479933 GAGE12JA6NER3 117 aa14.32□□□□□ -0.12
TNFRSF8-204ENST00000479933 GAGE7O76087 117 aa14.32□□□□□ -0.12
TNFRSF8-204ENST00000479933 LGALS1P09382 135 aaKnown RBP14.32□□□□□ -0.12
TNFRSF8-204ENST00000479933 GAGE12FP0CL80 117 aa14.32□□□□□ -0.12
TNFRSF8-204ENST00000479933 GAGE12GP0CL81 117 aa14.32□□□□□ -0.12
TNFRSF8-204ENST00000479933 GAGE12IP0CL82 117 aa14.32□□□□□ -0.12
TNFRSF8-204ENST00000479933 SNRPD3P62318 126 aaKnown RBP14.32□□□□□ -0.12
TNFRSF8-204ENST00000479933 RPL32P62910 135 aaKnown RBP14.32□□□□□ -0.12
TNFRSF8-204ENST00000479933 GAGE4Q13068 117 aa14.32□□□□□ -0.12
TNFRSF8-204ENST00000479933 RASL10AQ92737 203 aa14.32□□□□□ -0.12
TNFRSF8-204ENST00000479933 FLNCQ14315 2725 aa14.32□□□□□ -0.12
TNFRSF8-204ENST00000479933 LGALS9O00182 355 aa14.32□□□□□ -0.12
TNFRSF8-204ENST00000479933 POM121L12Q8N7R1 296 aa14.32□□□□□ -0.12
TNFRSF8-204ENST00000479933 COL12A1Q99715 3063 aa14.31□□□□□ -0.12
TNFRSF8-204ENST00000479933 TRAV12-1A0A0B4J245 112 aa14.31□□□□□ -0.12
TNFRSF8-204ENST00000479933 EDN2P20800 178 aa14.31□□□□□ -0.12
TNFRSF8-204ENST00000479933 BEX4Q9NWD9 120 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF8-204ENST00000479933 TNFRSF18Q9Y5U5 241 aa14.3□□□□□ -0.12
TNFRSF8-204ENST00000479933 A8MWV9 139 aa14.3□□□□□ -0.12
TNFRSF8-204ENST00000479933 RNF223E7ERA6 249 aa14.3□□□□□ -0.12
TNFRSF8-204ENST00000479933 PRB1P04280 392 aa14.3□□□□□ -0.12
TNFRSF8-204ENST00000479933 MGPP08493 103 aa14.3□□□□□ -0.12
TNFRSF8-204ENST00000479933 NDUFV3P56181 108 aaKnown RBP14.3□□□□□ -0.12
TNFRSF8-204ENST00000479933 IGHV4-31P0DP07 118 aa14.29□□□□□ -0.12
TNFRSF8-204ENST00000479933 PSMB2P49721 201 aa14.29□□□□□ -0.12
TNFRSF8-204ENST00000479933 C10orf99Q6UWK7 81 aa14.29□□□□□ -0.12
TNFRSF8-204ENST00000479933 UBE2E2Q96LR5 201 aa14.29□□□□□ -0.12
TNFRSF8-204ENST00000479933 K7EQG2 157 aa14.29□□□□□ -0.12
TNFRSF8-204ENST00000479933 ZNF702PQ9H963 129 aa14.29□□□□□ -0.12
TNFRSF8-204ENST00000479933 LRRC75A-AS1Q8N1F1 130 aa14.28□□□□□ -0.12
TNFRSF8-204ENST00000479933 RNF152Q8N8N0 203 aa14.28□□□□□ -0.12
TNFRSF8-204ENST00000479933 TOMM6Q96B49 74 aa14.28□□□□□ -0.12
TNFRSF8-204ENST00000479933 A0A0J9YX75 114 aa14.27□□□□□ -0.12
TNFRSF8-204ENST00000479933 MAPK1IP1LQ8NDC0 245 aa14.27□□□□□ -0.12
TNFRSF8-204ENST00000479933 ACACBO00763 2458 aa14.27□□□□□ -0.12
TNFRSF8-204ENST00000479933 LINC01549A6NIU2 74 aa14.27□□□□□ -0.13
TNFRSF8-204ENST00000479933 F8VRH5 84 aa14.27□□□□□ -0.13
TNFRSF8-204ENST00000479933 DUSP14O95147 198 aaKnown RBP14.27□□□□□ -0.13
TNFRSF8-204ENST00000479933 RPL39LQ96EH5 51 aaKnown RBP14.27□□□□□ -0.13
TNFRSF8-204ENST00000479933 CSPG4Q6UVK1 2322 aa14.27□□□□□ -0.13
TNFRSF8-204ENST00000479933 CELSR1Q9NYQ6 3014 aa14.27□□□□□ -0.13
TNFRSF8-204ENST00000479933 IGHV4OR15-8A0A075B7B6 117 aa14.26□□□□□ -0.13
TNFRSF8-204ENST00000479933 A0A087WW49 117 aa14.26□□□□□ -0.13
TNFRSF8-204ENST00000479933 H7C1H1 209 aa14.26□□□□□ -0.13
TNFRSF8-204ENST00000479933 SPRY2O43597 315 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms