RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 SCO2A0A1W2PP80 73 aa11.56□□□□□ -0.56
ECHDC1-216ENST00000479525 CIDEAO60543 219 aa11.56□□□□□ -0.56
ECHDC1-216ENST00000479525 FAM162BQ5T6X4 162 aa11.56□□□□□ -0.56
ECHDC1-216ENST00000479525 ZFP2Q6ZN57 461 aa11.56□□□□□ -0.56
ECHDC1-216ENST00000479525 OR11H4Q8NGC9 324 aa11.56□□□□□ -0.56
ECHDC1-216ENST00000479525 FAM213BQ8TBF2 198 aa11.56□□□□□ -0.56
ECHDC1-216ENST00000479525 INAFM2P0DMQ5 153 aa11.55□□□□□ -0.56
ECHDC1-216ENST00000479525 SSTP61278 116 aa11.55□□□□□ -0.56
ECHDC1-216ENST00000479525 FMC1Q96HJ9 113 aa11.55□□□□□ -0.56
ECHDC1-216ENST00000479525 PHLDA3Q9Y5J5 127 aa11.55□□□□□ -0.56
ECHDC1-216ENST00000479525 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.54□□□□□ -0.56
ECHDC1-216ENST00000479525 ZNF674Q2M3X9 581 aa11.54□□□□□ -0.56
ECHDC1-216ENST00000479525 LINC01620Q4KN68 170 aa11.54□□□□□ -0.56
ECHDC1-216ENST00000479525 SYT8Q8NBV8 401 aa11.54□□□□□ -0.56
ECHDC1-216ENST00000479525 STOML3Q8TAV4 291 aa11.54□□□□□ -0.56
ECHDC1-216ENST00000479525 ZFP30Q9Y2G7 519 aa11.54□□□□□ -0.56
ECHDC1-216ENST00000479525 LTAP01374 205 aa11.54□□□□□ -0.56
ECHDC1-216ENST00000479525 TPT1P13693 172 aaKnown RBP11.54□□□□□ -0.56
ECHDC1-216ENST00000479525 SFT2D1Q8WV19 159 aa11.54□□□□□ -0.56
ECHDC1-216ENST00000479525 FRZBQ92765 325 aa11.54□□□□□ -0.56
ECHDC1-216ENST00000479525 NKX6-2Q9C056 277 aaPredicted RBP11.54□□□□□ -0.56
ECHDC1-216ENST00000479525 LINC01559Q495D7 138 aa11.53□□□□□ -0.56
ECHDC1-216ENST00000479525 KCNRGQ8N5I3 272 aa11.53□□□□□ -0.56
ECHDC1-216ENST00000479525 SFRP2Q96HF1 295 aa11.53□□□□□ -0.56
ECHDC1-216ENST00000479525 ZNF471Q9BX82 626 aaPredicted RBP11.53□□□□□ -0.56
ECHDC1-216ENST00000479525 HERC1Q15751 4861 aa11.52□□□□□ -0.57
ECHDC1-216ENST00000479525 DNLZQ5SXM8 178 aa11.52□□□□□ -0.57
ECHDC1-216ENST00000479525 PRR27Q6MZM9 219 aa11.52□□□□□ -0.57
ECHDC1-216ENST00000479525 BAALCQ8WXS3 180 aa11.52□□□□□ -0.57
ECHDC1-216ENST00000479525 COX8CQ7Z4L0 72 aa11.51□□□□□ -0.57
ECHDC1-216ENST00000479525 OR10AG1Q8NH19 301 aa11.51□□□□□ -0.57
ECHDC1-216ENST00000479525 KLK12Q9UKR0 248 aa11.51□□□□□ -0.57
ECHDC1-216ENST00000479525 RHODO00212 210 aa11.5□□□□□ -0.57
ECHDC1-216ENST00000479525 PIK3CD-AS1Q5SR53 167 aa11.5□□□□□ -0.57
ECHDC1-216ENST00000479525 MYCBP2O75592 4640 aa11.49□□□□□ -0.57
ECHDC1-216ENST00000479525 LAGE3Q14657 143 aa11.49□□□□□ -0.57
ECHDC1-216ENST00000479525 NIT1Q86X76 327 aa11.49□□□□□ -0.57
ECHDC1-216ENST00000479525 ZFP82Q8N141 532 aa11.49□□□□□ -0.57
ECHDC1-216ENST00000479525 NTN5Q8WTR8 489 aaPredicted RBP11.49□□□□□ -0.57
ECHDC1-216ENST00000479525 IGKV2D-24A0A075B6R9 120 aa11.48□□□□□ -0.57
ECHDC1-216ENST00000479525 TRBV6-1A0A0K0K1D8 114 aa11.48□□□□□ -0.57
ECHDC1-216ENST00000479525 BCL2L11O43521 198 aa11.48□□□□□ -0.57
ECHDC1-216ENST00000479525 ZNF56Q15929 161 aa11.48□□□□□ -0.57
ECHDC1-216ENST00000479525 MBD3L1Q8WWY6 194 aa11.48□□□□□ -0.57
ECHDC1-216ENST00000479525 TM2D2Q9BX73 214 aa11.48□□□□□ -0.57
ECHDC1-216ENST00000479525 FLG2Q5D862 2391 aaPredicted RBP11.48□□□□□ -0.57
ECHDC1-216ENST00000479525 SEC11BP0C7V7 166 aa11.47□□□□□ -0.57
ECHDC1-216ENST00000479525 CCL20P78556 96 aa11.47□□□□□ -0.57
ECHDC1-216ENST00000479525 ZNF345Q14585 488 aa11.47□□□□□ -0.57
ECHDC1-216ENST00000479525 BAGE2Q86Y30 109 aa11.47□□□□□ -0.57
ECHDC1-216ENST00000479525 UBE2WQ96B02 151 aa11.47□□□□□ -0.57
ECHDC1-216ENST00000479525 DERL1Q9BUN8 251 aa11.47□□□□□ -0.57
ECHDC1-216ENST00000479525 URGCP-MRPS24S4R325 110 aa11.47□□□□□ -0.57
ECHDC1-216ENST00000479525 SRRM2Q9UQ35 2752 aaKnown RBP11.47□□□□□ -0.57
ECHDC1-216ENST00000479525 TRAV8-3A0A0A6YYJ7 113 aa11.46□□□□□ -0.57
ECHDC1-216ENST00000479525 KANTRA0A1W2PQU2 76 aa11.46□□□□□ -0.57
ECHDC1-216ENST00000479525 PFDN1O60925 122 aa11.46□□□□□ -0.57
ECHDC1-216ENST00000479525 TMEM70Q9BUB7 260 aa11.46□□□□□ -0.57
ECHDC1-216ENST00000479525 A0A087WWC5 75 aa11.45□□□□□ -0.58
ECHDC1-216ENST00000479525 H2AFB1P0C5Y9 115 aa11.45□□□□□ -0.58
ECHDC1-216ENST00000479525 GZMBP10144 247 aa11.45□□□□□ -0.58
ECHDC1-216ENST00000479525 UBE2D3P61077 147 aa11.45□□□□□ -0.58
ECHDC1-216ENST00000479525 UBE2D2P62837 147 aa11.45□□□□□ -0.58
ECHDC1-216ENST00000479525 RPL36AP83881 106 aaKnown RBP11.45□□□□□ -0.58
ECHDC1-216ENST00000479525 NEXN-AS1Q8NBZ9 246 aa11.45□□□□□ -0.58
ECHDC1-216ENST00000479525 RPL36ALQ969Q0 106 aaKnown RBP11.45□□□□□ -0.58
ECHDC1-216ENST00000479525 RBFOX3A6NFN3 312 aa11.44□□□□□ -0.58
ECHDC1-216ENST00000479525 TMUB2Q71RG4 321 aa11.44□□□□□ -0.58
ECHDC1-216ENST00000479525 MLST8Q9BVC4 326 aa11.44□□□□□ -0.58
ECHDC1-216ENST00000479525 GNG13Q9P2W3 67 aa11.44□□□□□ -0.58
ECHDC1-216ENST00000479525 A0A087WX48 190 aa11.43□□□□□ -0.58
ECHDC1-216ENST00000479525 A0A0D9SG52 128 aa11.43□□□□□ -0.58
ECHDC1-216ENST00000479525 HMSDA8MTL9 139 aa11.43□□□□□ -0.58
ECHDC1-216ENST00000479525 TMEM262E9PQX1 116 aa11.43□□□□□ -0.58
ECHDC1-216ENST00000479525 FAM229AH3BQW9 127 aa11.43□□□□□ -0.58
ECHDC1-216ENST00000479525 TCEAL7Q9BRU2 100 aa11.43□□□□□ -0.58
ECHDC1-216ENST00000479525 TRBV7-3A0A075B6L6 115 aa11.42□□□□□ -0.58
ECHDC1-216ENST00000479525 UMAD1C9J7I0 102 aa11.42□□□□□ -0.58
ECHDC1-216ENST00000479525 F5H697 171 aa11.42□□□□□ -0.58
ECHDC1-216ENST00000479525 RPL35P42766 123 aaKnown RBP11.42□□□□□ -0.58
ECHDC1-216ENST00000479525 SPANXN1Q5VSR9 72 aa11.42□□□□□ -0.58
ECHDC1-216ENST00000479525 SNAI2O43623 268 aa11.41□□□□□ -0.58
ECHDC1-216ENST00000479525 MPV17L2Q567V2 206 aa11.41□□□□□ -0.58
ECHDC1-216ENST00000479525 TOR2AQ5JU69 321 aa11.41□□□□□ -0.58
ECHDC1-216ENST00000479525 CLPSL2Q6UWE3 100 aa11.41□□□□□ -0.58
ECHDC1-216ENST00000479525 C15orf54Q8N8G6 183 aa11.41□□□□□ -0.58
ECHDC1-216ENST00000479525 DEFB104AQ8WTQ1 72 aa11.41□□□□□ -0.58
ECHDC1-216ENST00000479525 TPPP3Q9BW30 176 aa11.41□□□□□ -0.58
ECHDC1-216ENST00000479525 RAB19A4D1S5 217 aa11.41□□□□□ -0.58
ECHDC1-216ENST00000479525 RAB4BP61018 213 aa11.41□□□□□ -0.58
ECHDC1-216ENST00000479525 TRBV10-1A0A0K0K1A3 114 aa11.4□□□□□ -0.59
ECHDC1-216ENST00000479525 C1QBP02746 253 aa11.4□□□□□ -0.59
ECHDC1-216ENST00000479525 S100A9P06702 114 aaKnown RBP11.4□□□□□ -0.59
ECHDC1-216ENST00000479525 MGPP08493 103 aa11.4□□□□□ -0.59
ECHDC1-216ENST00000479525 CENPWQ5EE01 88 aa11.4□□□□□ -0.59
ECHDC1-216ENST00000479525 Q8N976 141 aa11.4□□□□□ -0.59
ECHDC1-216ENST00000479525 TRBV6-8A0A0A6YYG3 113 aa11.39□□□□□ -0.59
ECHDC1-216ENST00000479525 KCNIP4Q6PIL6 250 aa11.39□□□□□ -0.59
ECHDC1-216ENST00000479525 ENHOQ6UWT2 76 aa11.39□□□□□ -0.59
ECHDC1-216ENST00000479525 NTM-AS1Q6ZSK4 140 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms