RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 NDUFA11Q86Y39 141 aa2.09□□□□□ -2.07
CDK13-204ENST00000478563 C5orf56Q8N8D9 126 aa2.09□□□□□ -2.07
CDK13-204ENST00000478563 LSM10Q969L4 123 aaKnown RBP2.09□□□□□ -2.07
CDK13-204ENST00000478563 SERP1Q9Y6X1 66 aa2.09□□□□□ -2.07
CDK13-204ENST00000478563 A6NIN4 97 aa2.08□□□□□ -2.08
CDK13-204ENST00000478563 BTG2P78543 158 aa2.08□□□□□ -2.08
CDK13-204ENST00000478563 C9orf116Q5BN46 136 aaPredicted RBP2.08□□□□□ -2.08
CDK13-204ENST00000478563 LINC00575Q6W349 94 aa2.08□□□□□ -2.08
CDK13-204ENST00000478563 PP6455Q8WZ26 134 aa2.08□□□□□ -2.08
CDK13-204ENST00000478563 NAA60Q9H7X0 242 aa2.08□□□□□ -2.08
CDK13-204ENST00000478563 ABCA4P78363 2273 aa2.08□□□□□ -2.08
CDK13-204ENST00000478563 MUC6Q6W4X9 2439 aa2.08□□□□□ -2.08
CDK13-204ENST00000478563 CFTRP13569 1480 aa2.07□□□□□ -2.08
CDK13-204ENST00000478563 TRAV12-3A0A0B4J271 114 aa2.07□□□□□ -2.08
CDK13-204ENST00000478563 TRBV30A0A0K0K1B3 111 aa2.07□□□□□ -2.08
CDK13-204ENST00000478563 TCRBV3S1A0A5B6 114 aa2.07□□□□□ -2.08
CDK13-204ENST00000478563 SNAPC5O75971 98 aa2.07□□□□□ -2.08
CDK13-204ENST00000478563 NPC2P61916 151 aa2.07□□□□□ -2.08
CDK13-204ENST00000478563 DLEC1Q9Y238 1755 aa2.07□□□□□ -2.08
CDK13-204ENST00000478563 BCL9LQ86UU0 1499 aa2.07□□□□□ -2.08
CDK13-204ENST00000478563 KIAA0100Q14667 2235 aaKnown RBP2.06□□□□□ -2.08
CDK13-204ENST00000478563 FCGBPQ9Y6R7 5405 aaPredicted RBP2.06□□□□□ -2.08
CDK13-204ENST00000478563 CAV3P56539 151 aa2.06□□□□□ -2.08
CDK13-204ENST00000478563 CGREF1Q99674 301 aa2.06□□□□□ -2.08
CDK13-204ENST00000478563 RPRMQ9NS64 109 aa2.06□□□□□ -2.08
CDK13-204ENST00000478563 ROS1P08922 2347 aa2.06□□□□□ -2.08
CDK13-204ENST00000478563 MUC22E2RYF6 1773 aaPredicted RBP2.05□□□□□ -2.08
CDK13-204ENST00000478563 TEX49A0A1B0GTD5 131 aa2.05□□□□□ -2.08
CDK13-204ENST00000478563 MCRIP1C9JLW8 97 aa2.05□□□□□ -2.08
CDK13-204ENST00000478563 FXYD1O00168 92 aa2.05□□□□□ -2.08
CDK13-204ENST00000478563 CYP2G1PQ6ZSU1 146 aa2.05□□□□□ -2.08
CDK13-204ENST00000478563 C10orf82Q8WW14 230 aa2.05□□□□□ -2.08
CDK13-204ENST00000478563 RREB1Q92766 1687 aa2.05□□□□□ -2.08
CDK13-204ENST00000478563 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.04□□□□□ -2.08
CDK13-204ENST00000478563 MIF4GDA9UHW6 222 aaKnown RBP2.04□□□□□ -2.08
CDK13-204ENST00000478563 S100A1P23297 94 aa2.04□□□□□ -2.08
CDK13-204ENST00000478563 CBLN1P23435 193 aa2.04□□□□□ -2.08
CDK13-204ENST00000478563 WHAMMP3Q1A5X7 153 aa2.04□□□□□ -2.08
CDK13-204ENST00000478563 ZNF518AQ6AHZ1 1483 aa2.04□□□□□ -2.08
CDK13-204ENST00000478563 Q6AWC8 147 aa2.04□□□□□ -2.08
CDK13-204ENST00000478563 Q6ZS92 163 aa2.04□□□□□ -2.08
CDK13-204ENST00000478563 SPTSSBQ8NFR3 76 aa2.04□□□□□ -2.08
CDK13-204ENST00000478563 AFDNP55196 1824 aaKnown RBP2.03□□□□□ -2.08
CDK13-204ENST00000478563 CORTO00230 105 aa2.03□□□□□ -2.08
CDK13-204ENST00000478563 KRTAP10-4P60372 401 aaPredicted RBP2.03□□□□□ -2.08
CDK13-204ENST00000478563 ZNF56Q15929 161 aa2.03□□□□□ -2.08
CDK13-204ENST00000478563 Q56UQ5 140 aa2.03□□□□□ -2.08
CDK13-204ENST00000478563 SRCAPQ6ZRS2 3230 aa2.02□□□□□ -2.09
CDK13-204ENST00000478563 DAPK1P53355 1430 aa2.02□□□□□ -2.09
CDK13-204ENST00000478563 ESPL1Q14674 2120 aa2.02□□□□□ -2.09
CDK13-204ENST00000478563 ARL14EPLP0DKL9 152 aa2.02□□□□□ -2.09
CDK13-204ENST00000478563 EIF4G3O43432 1585 aaKnown RBP2.02□□□□□ -2.09
CDK13-204ENST00000478563 SMARCA2P51531 1590 aa2.02□□□□□ -2.09
CDK13-204ENST00000478563 A0A1W2PPM0 123 aa2.01□□□□□ -2.09
CDK13-204ENST00000478563 S100PP25815 95 aa2.01□□□□□ -2.09
CDK13-204ENST00000478563 CNTRLQ7Z7A1 2325 aa2.01□□□□□ -2.09
CDK13-204ENST00000478563 BLMP54132 1417 aaPredicted RBP2□□□□□ -2.09
CDK13-204ENST00000478563 CC2D2AQ9P2K1 1620 aa2□□□□□ -2.09
CDK13-204ENST00000478563 MRPS10P82664 201 aaKnown RBP2□□□□□ -2.09
CDK13-204ENST00000478563 RBM3P98179 157 aaKnown RBP2□□□□□ -2.09
CDK13-204ENST00000478563 CATR1Q13166 79 aa2□□□□□ -2.09
CDK13-204ENST00000478563 LAMB1P07942 1786 aa2□□□□□ -2.09
CDK13-204ENST00000478563 APOC4-APOC2K7ER74 178 aa1.99□□□□□ -2.09
CDK13-204ENST00000478563 IFNA17P01571 189 aa1.99□□□□□ -2.09
CDK13-204ENST00000478563 APOC2P02655 101 aa1.99□□□□□ -2.09
CDK13-204ENST00000478563 GNG4P50150 75 aa1.99□□□□□ -2.09
CDK13-204ENST00000478563 TPPP2P59282 170 aa1.99□□□□□ -2.09
CDK13-204ENST00000478563 Q8N6K4 173 aa1.99□□□□□ -2.09
CDK13-204ENST00000478563 Q8N8P6 123 aa1.99□□□□□ -2.09
CDK13-204ENST00000478563 ZNF142P52746 1687 aaPredicted RBP1.99□□□□□ -2.09
CDK13-204ENST00000478563 PRDM2Q13029 1718 aa1.98□□□□□ -2.09
CDK13-204ENST00000478563 BCORL1Q5H9F3 1711 aa1.98□□□□□ -2.09
CDK13-204ENST00000478563 INSL4Q14641 139 aa1.98□□□□□ -2.09
CDK13-204ENST00000478563 C12orf73Q69YU5 71 aa1.98□□□□□ -2.09
CDK13-204ENST00000478563 MRPL54Q6P161 138 aaKnown RBP1.98□□□□□ -2.09
CDK13-204ENST00000478563 C20orf197Q8N268 126 aa1.98□□□□□ -2.09
CDK13-204ENST00000478563 A2ML1A8K2U0 1454 aa1.98□□□□□ -2.09
CDK13-204ENST00000478563 TRBV10-3A0A0K0K1G6 114 aa1.97□□□□□ -2.09
CDK13-204ENST00000478563 KLKP1Q107X0 134 aa1.97□□□□□ -2.09
CDK13-204ENST00000478563 COA4Q9NYJ1 87 aa1.97□□□□□ -2.09
CDK13-204ENST00000478563 ZDBF2Q9HCK1 2354 aa1.96□□□□□ -2.09
CDK13-204ENST00000478563 RBBP6Q7Z6E9 1792 aaKnown RBP1.96□□□□□ -2.1
CDK13-204ENST00000478563 PPP3R1P63098 170 aa1.96□□□□□ -2.1
CDK13-204ENST00000478563 PPP1R1CQ8WVI7 109 aa1.96□□□□□ -2.1
CDK13-204ENST00000478563 BET1LQ9NYM9 111 aa1.96□□□□□ -2.1
CDK13-204ENST00000478563 BAZ1AQ9NRL2 1556 aaPredicted RBP1.96□□□□□ -2.1
CDK13-204ENST00000478563 KTN1Q86UP2 1357 aaKnown RBP1.96□□□□□ -2.1
CDK13-204ENST00000478563 FAM135AQ9P2D6 1515 aa1.96□□□□□ -2.1
CDK13-204ENST00000478563 DCAF1Q9Y4B6 1507 aa1.96□□□□□ -2.1
CDK13-204ENST00000478563 MYOM2P54296 1465 aa1.95□□□□□ -2.1
CDK13-204ENST00000478563 HELZ2Q9BYK8 2649 aaKnown RBP1.95□□□□□ -2.1
CDK13-204ENST00000478563 PIGBOS1A0A0B4J2F0 54 aa1.95□□□□□ -2.1
CDK13-204ENST00000478563 TNFP01375 233 aa1.95□□□□□ -2.1
CDK13-204ENST00000478563 CCL3L1P16619 93 aa1.95□□□□□ -2.1
CDK13-204ENST00000478563 ELOF1P60002 83 aaKnown RBP1.95□□□□□ -2.1
CDK13-204ENST00000478563 C9orf153Q5TBE3 101 aa1.95□□□□□ -2.1
CDK13-204ENST00000478563 C10orf99Q6UWK7 81 aa1.95□□□□□ -2.1
CDK13-204ENST00000478563 CUL7Q14999 1698 aa1.95□□□□□ -2.1
CDK13-204ENST00000478563 KDM6BO15054 1643 aa1.95□□□□□ -2.1
CDK13-204ENST00000478563 QRICH2Q9H0J4 1663 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms