RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 PKDREJQ9NTG1 2253 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 IGLV2-18A0A075B6J9 118 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 TRBV25-1A0A075B6N4 114 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 TRAV41A0A0B4J266 112 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 IGHV1-69DA0A0B4J2H0 117 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 CENPVL3A0A0U1RRI6 287 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 NDUFA4O00483 81 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 BRI3O95415 125 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 IGHV3-23P01764 117 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 EFNA4P52798 201 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 DLX1P56177 255 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 RPL32P62910 135 aaKnown RBP3.21□□□□□ -1.9
GPNMB-210ENST00000478451 NDPQ00604 133 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 ERCC8Q13216 396 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 CLEC19AQ6UXS0 136 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 NEGR1Q7Z3B1 354 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 PCP2Q8IVA1 136 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 USMG5Q96IX5 58 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 HIST1H4GQ99525 98 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 NHP2Q9NX24 153 aaKnown RBP3.21□□□□□ -1.9
GPNMB-210ENST00000478451 TP73-AS1Q9UF72 201 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 CHTOPQ9Y3Y2 248 aaKnown RBP3.21□□□□□ -1.9
GPNMB-210ENST00000478451 PHLDA3Q9Y5J5 127 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 SELENOKQ9Y6D0 94 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 WDFY4Q6ZS81 3184 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 PCNX1Q96RV3 2341 aa3.21□□□□□ -1.9
GPNMB-210ENST00000478451 COL6A3P12111 3177 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 TRAV40A0A0B4J280 105 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 IGHV7-4-1A0A0J9YVY3 117 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 MYMXA0A1B0GTQ4 84 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 NPFFO15130 113 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 TGFAP01135 160 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 IGHG4P01861 327 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 TRGV3P03979 118 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 RPL35AP18077 110 aaKnown RBP3.2□□□□□ -1.9
GPNMB-210ENST00000478451 HLA-DMBP28068 263 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 SAA4P35542 130 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 ID1P41134 155 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 KRTAP10-12P60413 245 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 PRB3Q04118 309 aaPredicted RBP3.2□□□□□ -1.9
GPNMB-210ENST00000478451 PRR30Q53SZ7 412 aaPredicted RBP3.2□□□□□ -1.9
GPNMB-210ENST00000478451 GTSCR1Q86UQ5 136 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 RNF182Q8N6D2 247 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 TOMM6Q96B49 74 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 TMEM141Q96I45 108 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 SCGB3A1Q96QR1 104 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 SPAG8Q99932 426 aaPredicted RBP3.2□□□□□ -1.9
GPNMB-210ENST00000478451 AGPAT4-IT1Q9H0P7 198 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 MRPL35Q9NZE8 188 aaKnown RBP3.2□□□□□ -1.9
GPNMB-210ENST00000478451 HHLA3Q9XRX5 114 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 CNOT1A5YKK6 2376 aaKnown RBP3.2□□□□□ -1.9
GPNMB-210ENST00000478451 AKAP13Q12802 2813 aa3.2□□□□□ -1.9
GPNMB-210ENST00000478451 CACNA1HO95180 2353 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 ACACAQ13085 2346 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 CELSR3Q9NYQ7 3312 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 IGKV3D-20A0A0C4DH25 116 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 CLPSL1A2RUU4 121 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 IGLL5B9A064 214 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 E9PLD3 99 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 H3BVH4 76 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 SAP30O75446 220 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 MGPP08493 103 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 FXYD2P54710 66 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 TCTAP57738 103 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 FXYD7P58549 80 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 RRN3P1Q2M238 152 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 FOXI2Q6ZQN5 318 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 Q71RC1 249 aaPredicted RBP3.19□□□□□ -1.9
GPNMB-210ENST00000478451 MTURNQ8N3F0 131 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 C5orf56Q8N8D9 126 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 ATP6V0E2Q8NHE4 81 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 ITLN2Q8WWU7 325 aaPredicted RBP3.19□□□□□ -1.9
GPNMB-210ENST00000478451 PRAC1Q96KF2 57 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 KIR2DL4Q99706 377 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 CYSLTR1Q9Y271 337 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 ROS1P08922 2347 aa3.19□□□□□ -1.9
GPNMB-210ENST00000478451 ZFHX4Q86UP3 3567 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 APC2O95996 2303 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 TRBV7-3A0A075B6L6 115 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 TRBV20-1A0A075B6N2 111 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 IGKV2D-26A0A0A0MRZ7 120 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 TRAV8-2A0A0B4J237 113 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 IGHV3-35A0A0C4DH35 117 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 A0A1B0GV72 72 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 A0A1B0GWB2 263 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 NDUFS8O00217 210 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 KALRNO60229 2985 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 LY6HO94772 140 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 IGF1P05019 195 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 C12orf74Q32Q52 190 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 FAM159AQ6UWV7 190 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 C2orf66Q6UXQ4 117 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 SCGB1D4Q6XE38 83 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 NOTCH2NLQ7Z3S9 236 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 KRTAP7-1Q8IUC3 87 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 APRG1Q8IVJ8 170 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 DLX4Q92988 240 aaPredicted RBP3.18□□□□□ -1.9
GPNMB-210ENST00000478451 ODF3Q96PU9 254 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 SIGMAR1Q99720 223 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 AGRNO00468 2067 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms