RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 OVOL1O14753 267 aa11.21□□□□□ -0.62
U2AF1-210ENST00000478282 EMP1P54849 157 aa11.21□□□□□ -0.62
U2AF1-210ENST00000478282 Q6ZS46 218 aa11.21□□□□□ -0.62
U2AF1-210ENST00000478282 IGIPA6NJ69 53 aa11.2□□□□□ -0.62
U2AF1-210ENST00000478282 PMVKQ15126 192 aa11.2□□□□□ -0.62
U2AF1-210ENST00000478282 J3QKU1 62 aa11.2□□□□□ -0.62
U2AF1-210ENST00000478282 RNASE3P12724 160 aaKnown RBP11.2□□□□□ -0.62
U2AF1-210ENST00000478282 RPL32P62910 135 aaKnown RBP11.2□□□□□ -0.62
U2AF1-210ENST00000478282 C10orf126Q8N4M7 172 aa11.2□□□□□ -0.62
U2AF1-210ENST00000478282 TSPEAR-AS2P59090 65 aa11.2□□□□□ -0.62
U2AF1-210ENST00000478282 SLC25A29Q8N8R3 303 aa11.2□□□□□ -0.62
U2AF1-210ENST00000478282 GNRH2O43555 120 aa11.19□□□□□ -0.62
U2AF1-210ENST00000478282 ZNF688P0C7X2 276 aa11.19□□□□□ -0.62
U2AF1-210ENST00000478282 RNASE4P34096 147 aaKnown RBP11.19□□□□□ -0.62
U2AF1-210ENST00000478282 UBE2E1P51965 193 aa11.19□□□□□ -0.62
U2AF1-210ENST00000478282 DEFB1P60022 68 aa11.19□□□□□ -0.62
U2AF1-210ENST00000478282 FAM19A4Q96LR4 140 aa11.19□□□□□ -0.62
U2AF1-210ENST00000478282 SOCS3O14543 225 aa11.19□□□□□ -0.62
U2AF1-210ENST00000478282 NXPH4O95158 308 aa11.19□□□□□ -0.62
U2AF1-210ENST00000478282 ANKRD29Q8N6D5 301 aa11.19□□□□□ -0.62
U2AF1-210ENST00000478282 KIF25-AS1Q9Y6Z4 181 aa11.19□□□□□ -0.62
U2AF1-210ENST00000478282 MUC4Q99102 2169 aa11.18□□□□□ -0.62
U2AF1-210ENST00000478282 IGHV4OR15-8A0A075B7B6 117 aa11.18□□□□□ -0.62
U2AF1-210ENST00000478282 A0A087WW49 117 aa11.18□□□□□ -0.62
U2AF1-210ENST00000478282 LINC00315P59091 139 aa11.18□□□□□ -0.62
U2AF1-210ENST00000478282 TMEM141Q96I45 108 aa11.18□□□□□ -0.62
U2AF1-210ENST00000478282 SAA4P35542 130 aa11.18□□□□□ -0.62
U2AF1-210ENST00000478282 APRG1Q8IVJ8 170 aa11.18□□□□□ -0.62
U2AF1-210ENST00000478282 PRO1854Q9UHT4 67 aa11.18□□□□□ -0.62
U2AF1-210ENST00000478282 TGFAP01135 160 aa11.17□□□□□ -0.62
U2AF1-210ENST00000478282 TIMM17AQ99595 171 aa11.17□□□□□ -0.62
U2AF1-210ENST00000478282 POLR2KP53803 58 aaKnown RBP11.17□□□□□ -0.62
U2AF1-210ENST00000478282 TMEM170BQ5T4T1 132 aa11.17□□□□□ -0.62
U2AF1-210ENST00000478282 ERG28Q9UKR5 140 aa11.17□□□□□ -0.62
U2AF1-210ENST00000478282 SCGB1C2P0DMR2 95 aa11.17□□□□□ -0.62
U2AF1-210ENST00000478282 RPL39P62891 51 aaKnown RBP11.17□□□□□ -0.62
U2AF1-210ENST00000478282 AMELXQ99217 191 aa11.17□□□□□ -0.62
U2AF1-210ENST00000478282 ARL3P36405 182 aa11.16□□□□□ -0.62
U2AF1-210ENST00000478282 C5orf56Q8N8D9 126 aa11.16□□□□□ -0.62
U2AF1-210ENST00000478282 UNQ9165/PRO28630Q6UXU0 137 aa11.16□□□□□ -0.62
U2AF1-210ENST00000478282 ZNRF2Q8NHG8 242 aa11.16□□□□□ -0.62
U2AF1-210ENST00000478282 KIR2DL4Q99706 377 aa11.16□□□□□ -0.62
U2AF1-210ENST00000478282 MYO18BQ8IUG5 2567 aa11.16□□□□□ -0.62
U2AF1-210ENST00000478282 FAM223BA6NKX1 122 aa11.15□□□□□ -0.62
U2AF1-210ENST00000478282 FAM223AQ8IWN6 122 aa11.15□□□□□ -0.62
U2AF1-210ENST00000478282 COL12A1Q99715 3063 aa11.15□□□□□ -0.62
U2AF1-210ENST00000478282 MED13LQ71F56 2210 aa11.15□□□□□ -0.62
U2AF1-210ENST00000478282 TMEM262E9PQX1 116 aa11.15□□□□□ -0.62
U2AF1-210ENST00000478282 J3QQQ9 107 aa11.15□□□□□ -0.62
U2AF1-210ENST00000478282 ZNF876PQ49A33 203 aa11.15□□□□□ -0.62
U2AF1-210ENST00000478282 DEFB104AQ8WTQ1 72 aa11.15□□□□□ -0.62
U2AF1-210ENST00000478282 RNF183Q96D59 192 aa11.15□□□□□ -0.62
U2AF1-210ENST00000478282 F6UB75 175 aa11.15□□□□□ -0.62
U2AF1-210ENST00000478282 VCYO14598 125 aa11.15□□□□□ -0.62
U2AF1-210ENST00000478282 SUMO4Q6EEV6 95 aa11.15□□□□□ -0.62
U2AF1-210ENST00000478282 UTP20O75691 2785 aaKnown RBP11.15□□□□□ -0.63
U2AF1-210ENST00000478282 TRAV41A0A0B4J266 112 aa11.14□□□□□ -0.63
U2AF1-210ENST00000478282 TRBV7-9A0A0J9YWB2 115 aa11.14□□□□□ -0.63
U2AF1-210ENST00000478282 LGALS3P17931 250 aaKnown RBP11.14□□□□□ -0.63
U2AF1-210ENST00000478282 C19orf54Q5BKX5 351 aa11.14□□□□□ -0.63
U2AF1-210ENST00000478282 M0QXV9 152 aa11.13□□□□□ -0.63
U2AF1-210ENST00000478282 NDUFA4O00483 81 aa11.13□□□□□ -0.63
U2AF1-210ENST00000478282 SLC25A20O43772 301 aa11.13□□□□□ -0.63
U2AF1-210ENST00000478282 TRBV12-3P01733 135 aa11.13□□□□□ -0.63
U2AF1-210ENST00000478282 JPT2Q9H910 190 aa11.13□□□□□ -0.63
U2AF1-210ENST00000478282 LINC00527Q9UJ94 153 aa11.13□□□□□ -0.63
U2AF1-210ENST00000478282 A4D1N5 150 aa11.12□□□□□ -0.63
U2AF1-210ENST00000478282 SDHAF1A6NFY7 115 aa11.12□□□□□ -0.63
U2AF1-210ENST00000478282 ZFAND6Q6FIF0 208 aa11.12□□□□□ -0.63
U2AF1-210ENST00000478282 C9JAW5 83 aa11.12□□□□□ -0.63
U2AF1-210ENST00000478282 IGHV3-33P01772 117 aa11.12□□□□□ -0.63
U2AF1-210ENST00000478282 ANAPC13Q9BS18 74 aa11.12□□□□□ -0.63
U2AF1-210ENST00000478282 TRBV27A0A0K0K1C4 114 aa11.11□□□□□ -0.63
U2AF1-210ENST00000478282 EIF4EBP3O60516 100 aaPredicted RBP11.11□□□□□ -0.63
U2AF1-210ENST00000478282 RPL11P62913 178 aaKnown RBP11.11□□□□□ -0.63
U2AF1-210ENST00000478282 TMEM219Q86XT9 240 aa11.11□□□□□ -0.63
U2AF1-210ENST00000478282 RAX2Q96IS3 184 aa11.11□□□□□ -0.63
U2AF1-210ENST00000478282 SPTBN1Q01082 2364 aaKnown RBP11.11□□□□□ -0.63
U2AF1-210ENST00000478282 A0A087WWL8 130 aa11.11□□□□□ -0.63
U2AF1-210ENST00000478282 TMEM263Q8WUH6 116 aaKnown RBP11.11□□□□□ -0.63
U2AF1-210ENST00000478282 CITED1Q99966 193 aa11.11□□□□□ -0.63
U2AF1-210ENST00000478282 F5H697 171 aa11.11□□□□□ -0.63
U2AF1-210ENST00000478282 NPFFO15130 113 aa11.11□□□□□ -0.63
U2AF1-210ENST00000478282 TEX29Q8N6K0 151 aa11.11□□□□□ -0.63
U2AF1-210ENST00000478282 GATA3P23771 443 aa11.1□□□□□ -0.63
U2AF1-210ENST00000478282 CRIP2P52943 208 aaPredicted RBP11.1□□□□□ -0.63
U2AF1-210ENST00000478282 MOB4Q9Y3A3 225 aa11.1□□□□□ -0.63
U2AF1-210ENST00000478282 A0A0B4J2C4 111 aa11.1□□□□□ -0.63
U2AF1-210ENST00000478282 TRBV6-5A0A0K0K1A5 114 aa11.1□□□□□ -0.63
U2AF1-210ENST00000478282 KLLNB2CW77 178 aa11.1□□□□□ -0.63
U2AF1-210ENST00000478282 LEPROTO15243 131 aa11.1□□□□□ -0.63
U2AF1-210ENST00000478282 FAM159AQ6UWV7 190 aa11.1□□□□□ -0.63
U2AF1-210ENST00000478282 TRPT1Q86TN4 253 aaKnown RBP11.1□□□□□ -0.63
U2AF1-210ENST00000478282 FBN2P35556 2912 aa11.09□□□□□ -0.63
U2AF1-210ENST00000478282 IGKV3-7A0A075B6H7 116 aa11.09□□□□□ -0.63
U2AF1-210ENST00000478282 TMEM223A0PJW6 202 aa11.09□□□□□ -0.63
U2AF1-210ENST00000478282 LGALS9O00182 355 aa11.09□□□□□ -0.63
U2AF1-210ENST00000478282 P0DMU3 169 aa11.09□□□□□ -0.63
U2AF1-210ENST00000478282 FAM231AP0DMU4 169 aa11.09□□□□□ -0.63
U2AF1-210ENST00000478282 FAM231CP0DMU5 169 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms