RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 HBDP02042 147 aa4.92□□□□□ -1.62
LDB3-206ENST00000477489 CD7P09564 240 aa4.92□□□□□ -1.62
LDB3-206ENST00000477489 C3orf79P0CE67 100 aa4.92□□□□□ -1.62
LDB3-206ENST00000477489 SMIM17P0DL12 118 aa4.92□□□□□ -1.62
LDB3-206ENST00000477489 MAP1LC3CQ9BXW4 147 aa4.92□□□□□ -1.62
LDB3-206ENST00000477489 ANK2Q01484 3957 aa4.92□□□□□ -1.62
LDB3-206ENST00000477489 SVEP1Q4LDE5 3571 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 KIR2DL5BA0A0G2JN68 375 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 KIR2DL5BA0A0G2JPC4 375 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 SYS1-DBNDD2H3BUS1 97 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 NPYP01303 97 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 EVI2AP22794 236 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 IFI27P40305 119 aaPredicted RBP4.91□□□□□ -1.62
LDB3-206ENST00000477489 KRTDAPP60985 99 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 ZNF415Q09FC8 603 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 SPINK13Q1W4C9 94 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 BEAN1Q3B7T3 259 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 ODF3L2Q3SX64 289 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 ORMDL2Q53FV1 153 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 MUC21Q5SSG8 566 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 MORN3Q6PF18 240 aaPredicted RBP4.91□□□□□ -1.62
LDB3-206ENST00000477489 MRPL52Q86TS9 123 aaKnown RBP4.91□□□□□ -1.62
LDB3-206ENST00000477489 STHQ8IWL8 128 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 KIR2DL5AQ8N109 375 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 FAM19A2Q8N3H0 131 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 NRACQ8N912 160 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 SPXQ9BT56 116 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 MCRIP2Q9BUT9 160 aaKnown RBP4.91□□□□□ -1.62
LDB3-206ENST00000477489 C1QTNF4Q9BXJ3 329 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 MSRB1Q9NZV6 116 aa4.91□□□□□ -1.62
LDB3-206ENST00000477489 IGLV2-18A0A075B6J9 118 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 TRBV6-5A0A0K0K1A5 114 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 A0A1W2PRX2 142 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 A8MWV9 139 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 H7C1H1 209 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 J3KRW8 73 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 RHODO00212 210 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 GNRH2O43555 120 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 CIDEAO60543 219 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 SAP30O75446 220 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 ATP5LO75964 103 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 PRB4P10163 310 aaPredicted RBP4.9□□□□□ -1.63
LDB3-206ENST00000477489 FCER1GP30273 86 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 DEFB1P60022 68 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 SUMO2P61956 95 aaKnown RBP4.9□□□□□ -1.63
LDB3-206ENST00000477489 KIR3DS1Q14943 382 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 TRPT1Q86TN4 253 aaKnown RBP4.9□□□□□ -1.63
LDB3-206ENST00000477489 Q8N1Y9 231 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 Q8N976 141 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 DUX3Q96PT4 197 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 VAMP8Q9BV40 100 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 ZNF747Q9BV97 191 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 SMIM2Q9BVW6 85 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 KIF25-AS1Q9Y6Z4 181 aa4.9□□□□□ -1.63
LDB3-206ENST00000477489 MUC21A0A0G2JKD1 596 aa4.89□□□□□ -1.63
LDB3-206ENST00000477489 MUC21A0A140T8X8 626 aa4.89□□□□□ -1.63
LDB3-206ENST00000477489 CBY3A6NI87 242 aa4.89□□□□□ -1.63
LDB3-206ENST00000477489 PCP4L1A6NKN8 68 aa4.89□□□□□ -1.63
LDB3-206ENST00000477489 KNCNA6PVL3 124 aa4.89□□□□□ -1.63
LDB3-206ENST00000477489 M0R2P5 195 aa4.89□□□□□ -1.63
LDB3-206ENST00000477489 DDTP30046 118 aa4.89□□□□□ -1.63
LDB3-206ENST00000477489 LINC00315P59091 139 aa4.89□□□□□ -1.63
LDB3-206ENST00000477489 LAGE3Q14657 143 aa4.89□□□□□ -1.63
LDB3-206ENST00000477489 LGALS9BQ3B8N2 356 aa4.89□□□□□ -1.63
LDB3-206ENST00000477489 LBHQ53QV2 105 aaPredicted RBP4.89□□□□□ -1.63
LDB3-206ENST00000477489 C9orf66Q5T8R8 295 aa4.89□□□□□ -1.63
LDB3-206ENST00000477489 LGALS9CQ6DKI2 356 aa4.89□□□□□ -1.63
LDB3-206ENST00000477489 ZNF664Q8N3J9 261 aa4.89□□□□□ -1.63
LDB3-206ENST00000477489 LINC00482Q8N8I6 264 aa4.89□□□□□ -1.63
LDB3-206ENST00000477489 MUC4Q99102 2169 aa4.89□□□□□ -1.63
LDB3-206ENST00000477489 TRAV12-2A0A075B6T6 113 aa4.88□□□□□ -1.63
LDB3-206ENST00000477489 TRAV9-2A0A087WT02 112 aa4.88□□□□□ -1.63
LDB3-206ENST00000477489 A0A096LNJ9 63 aa4.88□□□□□ -1.63
LDB3-206ENST00000477489 RBMY1BA6NDE4 496 aaKnown RBP4.88□□□□□ -1.63
LDB3-206ENST00000477489 RBMY1EA6NEQ0 496 aaKnown RBP4.88□□□□□ -1.63
LDB3-206ENST00000477489 NCR2O95944 276 aa4.88□□□□□ -1.63
LDB3-206ENST00000477489 IGKV3-20P01619 116 aa4.88□□□□□ -1.63
LDB3-206ENST00000477489 RBMY1DP0C7P1 496 aaKnown RBP4.88□□□□□ -1.63
LDB3-206ENST00000477489 NSUN5P1Q3KNT7 163 aa4.88□□□□□ -1.63
LDB3-206ENST00000477489 LINC01545Q5VT33 79 aa4.88□□□□□ -1.63
LDB3-206ENST00000477489 ZFP2Q6ZN57 461 aa4.88□□□□□ -1.63
LDB3-206ENST00000477489 Q6ZQT7 251 aa4.88□□□□□ -1.63
LDB3-206ENST00000477489 C14orf178Q8N769 122 aaPredicted RBP4.88□□□□□ -1.63
LDB3-206ENST00000477489 C11orf44Q8N8P7 122 aa4.88□□□□□ -1.63
LDB3-206ENST00000477489 CITED1Q99966 193 aa4.88□□□□□ -1.63
LDB3-206ENST00000477489 GOLT1BQ9Y3E0 138 aa4.88□□□□□ -1.63
LDB3-206ENST00000477489 AGRNO00468 2067 aa4.88□□□□□ -1.63
LDB3-206ENST00000477489 SORL1Q92673 2214 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 LOC389332A0A1B0GUA5 103 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 HSBP1L1C9JCN9 74 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 SMKR1H3BMG3 65 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 VCYO14598 125 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 SSTP61278 116 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 DEFA6Q01524 100 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 ZNF876PQ49A33 203 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 C11orf72Q8NBR9 251 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 TMEM263Q8WUH6 116 aaKnown RBP4.87□□□□□ -1.63
LDB3-206ENST00000477489 RASL10AQ92737 203 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 IFI27L1Q96BM0 104 aa4.87□□□□□ -1.63
LDB3-206ENST00000477489 DNAJC30Q96LL9 226 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms