RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SLC25A29Q8N8R3 303 aa11.04□□□□□ -0.64
COPS3-207ENST00000477299 TSKUQ8WUA8 353 aa11.04□□□□□ -0.64
COPS3-207ENST00000477299 PRO0255Q9UI72 69 aa11.04□□□□□ -0.64
COPS3-207ENST00000477299 DNAH1Q9P2D7 4330 aa11.04□□□□□ -0.64
COPS3-207ENST00000477299 A0A096LPF7 62 aa11.03□□□□□ -0.64
COPS3-207ENST00000477299 A0A1W2PPQ1 181 aa11.03□□□□□ -0.64
COPS3-207ENST00000477299 P0DMU3 169 aa11.03□□□□□ -0.64
COPS3-207ENST00000477299 FAM231AP0DMU4 169 aa11.03□□□□□ -0.64
COPS3-207ENST00000477299 FAM231CP0DMU5 169 aa11.03□□□□□ -0.64
COPS3-207ENST00000477299 LINC00315P59091 139 aa11.03□□□□□ -0.64
COPS3-207ENST00000477299 RNF212Q495C1 297 aa11.03□□□□□ -0.64
COPS3-207ENST00000477299 FAM210BQ96KR6 192 aa11.03□□□□□ -0.64
COPS3-207ENST00000477299 VPS13DQ5THJ4 4388 aa11.02□□□□□ -0.64
COPS3-207ENST00000477299 HIGD1CA8MV81 97 aa11.02□□□□□ -0.65
COPS3-207ENST00000477299 F2Z2F3 143 aa11.02□□□□□ -0.65
COPS3-207ENST00000477299 EVI2AP22794 236 aa11.02□□□□□ -0.65
COPS3-207ENST00000477299 C10orf91Q5T1B1 145 aa11.02□□□□□ -0.65
COPS3-207ENST00000477299 NUP35Q8NFH5 326 aa11.02□□□□□ -0.65
COPS3-207ENST00000477299 GYPEP15421 78 aa11.01□□□□□ -0.65
COPS3-207ENST00000477299 CACNG7P62955 275 aa11.01□□□□□ -0.65
COPS3-207ENST00000477299 TWIST1Q15672 202 aa11.01□□□□□ -0.65
COPS3-207ENST00000477299 ZFP2Q6ZN57 461 aa11.01□□□□□ -0.65
COPS3-207ENST00000477299 SEC11CQ9BY50 192 aa11.01□□□□□ -0.65
COPS3-207ENST00000477299 CNFNQ9BYD5 112 aa11.01□□□□□ -0.65
COPS3-207ENST00000477299 SACSQ9NZJ4 4579 aa11.01□□□□□ -0.65
COPS3-207ENST00000477299 K7EQD1 137 aa11□□□□□ -0.65
COPS3-207ENST00000477299 TCTAP57738 103 aa11□□□□□ -0.65
COPS3-207ENST00000477299 WDR73Q6P4I2 378 aa11□□□□□ -0.65
COPS3-207ENST00000477299 C15orf53Q8NAA6 179 aa11□□□□□ -0.65
COPS3-207ENST00000477299 LINC00476Q8WZB0 136 aa11□□□□□ -0.65
COPS3-207ENST00000477299 HYDINQ4G0P3 5121 aa10.99□□□□□ -0.65
COPS3-207ENST00000477299 SMIM27A0A1W2PRY6 76 aa10.99□□□□□ -0.65
COPS3-207ENST00000477299 H3BNG1 76 aa10.99□□□□□ -0.65
COPS3-207ENST00000477299 LY6G6CO95867 125 aa10.99□□□□□ -0.65
COPS3-207ENST00000477299 SLAQ13239 276 aa10.99□□□□□ -0.65
COPS3-207ENST00000477299 ESRGQ1W209 222 aa10.99□□□□□ -0.65
COPS3-207ENST00000477299 GFRA4Q9GZZ7 299 aa10.99□□□□□ -0.65
COPS3-207ENST00000477299 LCE6AA0A183 80 aa10.98□□□□□ -0.65
COPS3-207ENST00000477299 TRBV6-4A0A1B0GX49 114 aa10.98□□□□□ -0.65
COPS3-207ENST00000477299 FAM3BP58499 235 aaPredicted RBP10.98□□□□□ -0.65
COPS3-207ENST00000477299 PNRC1Q12796 327 aaPredicted RBP10.98□□□□□ -0.65
COPS3-207ENST00000477299 FAM231BA6NCW3 169 aa10.97□□□□□ -0.65
COPS3-207ENST00000477299 F5H697 171 aa10.97□□□□□ -0.65
COPS3-207ENST00000477299 RHODO00212 210 aa10.97□□□□□ -0.65
COPS3-207ENST00000477299 CIDEAO60543 219 aa10.97□□□□□ -0.65
COPS3-207ENST00000477299 MGPP08493 103 aa10.97□□□□□ -0.65
COPS3-207ENST00000477299 ZNF56Q15929 161 aa10.97□□□□□ -0.65
COPS3-207ENST00000477299 AP1S3Q96PC3 154 aa10.97□□□□□ -0.65
COPS3-207ENST00000477299 CARHSP1Q9Y2V2 147 aaKnown RBP10.97□□□□□ -0.65
COPS3-207ENST00000477299 LINC00588Q9Y4M8 146 aa10.97□□□□□ -0.65
COPS3-207ENST00000477299 ICOSQ9Y6W8 199 aa10.97□□□□□ -0.65
COPS3-207ENST00000477299 KMT2AQ03164 3969 aa10.97□□□□□ -0.65
COPS3-207ENST00000477299 A0A1B0GUT8 65 aa10.96□□□□□ -0.65
COPS3-207ENST00000477299 GAGE12JA6NER3 117 aa10.96□□□□□ -0.65
COPS3-207ENST00000477299 MT-ND4LP03901 98 aa10.96□□□□□ -0.65
COPS3-207ENST00000477299 GAGE1Q13065 139 aa10.96□□□□□ -0.65
COPS3-207ENST00000477299 GAGE4Q13068 117 aa10.96□□□□□ -0.65
COPS3-207ENST00000477299 GAGE5Q13069 117 aa10.96□□□□□ -0.65
COPS3-207ENST00000477299 GAGE13Q4V321 117 aa10.96□□□□□ -0.65
COPS3-207ENST00000477299 LGALS9CQ6DKI2 356 aa10.96□□□□□ -0.65
COPS3-207ENST00000477299 NAT8BQ9UHF3 227 aa10.96□□□□□ -0.65
COPS3-207ENST00000477299 SMIM17P0DL12 118 aa10.95□□□□□ -0.66
COPS3-207ENST00000477299 RAB4BP61018 213 aa10.95□□□□□ -0.66
COPS3-207ENST00000477299 RHOHQ15669 191 aa10.95□□□□□ -0.66
COPS3-207ENST00000477299 MRPL23Q16540 153 aaKnown RBP10.95□□□□□ -0.66
COPS3-207ENST00000477299 ANAPC16Q96DE5 110 aa10.95□□□□□ -0.66
COPS3-207ENST00000477299 TRAV26-2A0A0B4J265 109 aa10.94□□□□□ -0.66
COPS3-207ENST00000477299 PPP1R2P9O14990 202 aa10.94□□□□□ -0.66
COPS3-207ENST00000477299 GAS8-AS1O95177 125 aa10.94□□□□□ -0.66
COPS3-207ENST00000477299 TRGC1P0CF51 173 aa10.94□□□□□ -0.66
COPS3-207ENST00000477299 SUMO4Q6EEV6 95 aa10.94□□□□□ -0.66
COPS3-207ENST00000477299 MRPL54Q6P161 138 aaKnown RBP10.94□□□□□ -0.66
COPS3-207ENST00000477299 LYPD5Q6UWN5 251 aa10.94□□□□□ -0.66
COPS3-207ENST00000477299 CLRN3Q8NCR9 226 aa10.94□□□□□ -0.66
COPS3-207ENST00000477299 PRADC1Q9BSG0 188 aa10.94□□□□□ -0.66
COPS3-207ENST00000477299 DPH3P1Q9H4G8 78 aa10.94□□□□□ -0.66
COPS3-207ENST00000477299 C7orf77A4D0Y5 90 aa10.93□□□□□ -0.66
COPS3-207ENST00000477299 APOC3P02656 99 aa10.93□□□□□ -0.66
COPS3-207ENST00000477299 LINC00694P0DN24 101 aa10.93□□□□□ -0.66
COPS3-207ENST00000477299 SRIP30626 198 aa10.93□□□□□ -0.66
COPS3-207ENST00000477299 NEXN-AS1Q8NBZ9 246 aa10.93□□□□□ -0.66
COPS3-207ENST00000477299 ZNRF2Q8NHG8 242 aa10.93□□□□□ -0.66
COPS3-207ENST00000477299 M0QY20 66 aa10.92□□□□□ -0.66
COPS3-207ENST00000477299 CAMPP49913 170 aa10.92□□□□□ -0.66
COPS3-207ENST00000477299 NEGR1Q7Z3B1 354 aa10.92□□□□□ -0.66
COPS3-207ENST00000477299 UBE2DNLQ8IWF7 75 aa10.92□□□□□ -0.66
COPS3-207ENST00000477299 GATD1Q8NB37 220 aa10.92□□□□□ -0.66
COPS3-207ENST00000477299 BORCS7Q96B45 105 aa10.92□□□□□ -0.66
COPS3-207ENST00000477299 RNF185Q96GF1 192 aa10.92□□□□□ -0.66
COPS3-207ENST00000477299 DNAH6Q9C0G6 4158 aa10.92□□□□□ -0.66
COPS3-207ENST00000477299 RYR2Q92736 4967 aa10.91□□□□□ -0.66
COPS3-207ENST00000477299 RIGQ13278 110 aa10.91□□□□□ -0.66
COPS3-207ENST00000477299 IGHV3-38A0A0C4DH36 116 aa10.9□□□□□ -0.66
COPS3-207ENST00000477299 A0A1B0GXF2 115 aa10.9□□□□□ -0.66
COPS3-207ENST00000477299 CCL18P55774 89 aa10.9□□□□□ -0.66
COPS3-207ENST00000477299 ATRAIDQ6UW56 229 aa10.9□□□□□ -0.66
COPS3-207ENST00000477299 AMN1Q8IY45 258 aa10.9□□□□□ -0.66
COPS3-207ENST00000477299 ATP6V0E2Q8NHE4 81 aa10.9□□□□□ -0.66
COPS3-207ENST00000477299 DEFB104AQ8WTQ1 72 aa10.9□□□□□ -0.66
COPS3-207ENST00000477299 RPL39LQ96EH5 51 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms