RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 GAGE5Q13069 117 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 GAGE13Q4V321 117 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 PIK3CD-AS1Q5SR53 167 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 LELP1Q5T871 98 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 TMUB2Q71RG4 321 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 Q8N3U1 123 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 C10orf126Q8N4M7 172 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 TCEAL7Q9BRU2 100 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 SCO2A0A1W2PP80 73 aa7.49□□□□□ -1.21
PTPRN-213ENST00000476930 IBA57-AS1B1ANH7 110 aa7.49□□□□□ -1.21
PTPRN-213ENST00000476930 SCRT2Q9NQ03 307 aa7.49□□□□□ -1.21
PTPRN-213ENST00000476930 A0A087WWL8 130 aa7.48□□□□□ -1.21
PTPRN-213ENST00000476930 M0R381 172 aa7.48□□□□□ -1.21
PTPRN-213ENST00000476930 H2AFB1P0C5Y9 115 aa7.48□□□□□ -1.21
PTPRN-213ENST00000476930 CCL20P78556 96 aa7.48□□□□□ -1.21
PTPRN-213ENST00000476930 RPL19P84098 196 aaKnown RBP7.48□□□□□ -1.21
PTPRN-213ENST00000476930 FAM74A4Q5TZK3 123 aa7.48□□□□□ -1.21
PTPRN-213ENST00000476930 SYT8Q8NBV8 401 aa7.48□□□□□ -1.21
PTPRN-213ENST00000476930 SFRP2Q96HF1 295 aa7.48□□□□□ -1.21
PTPRN-213ENST00000476930 Q9HAA7 133 aa7.48□□□□□ -1.21
PTPRN-213ENST00000476930 PHLDA3Q9Y5J5 127 aa7.48□□□□□ -1.21
PTPRN-213ENST00000476930 LRCOL1A6NCL2 159 aa7.47□□□□□ -1.21
PTPRN-213ENST00000476930 PFDN1O60925 122 aa7.47□□□□□ -1.21
PTPRN-213ENST00000476930 TPT1P13693 172 aaKnown RBP7.47□□□□□ -1.21
PTPRN-213ENST00000476930 KRTAP10-1P60331 282 aa7.47□□□□□ -1.21
PTPRN-213ENST00000476930 Q8N1X5 172 aa7.47□□□□□ -1.21
PTPRN-213ENST00000476930 MLST8Q9BVC4 326 aa7.47□□□□□ -1.21
PTPRN-213ENST00000476930 RHODO00212 210 aa7.46□□□□□ -1.22
PTPRN-213ENST00000476930 PSCAO43653 123 aa7.46□□□□□ -1.22
PTPRN-213ENST00000476930 S100A9P06702 114 aaKnown RBP7.46□□□□□ -1.22
PTPRN-213ENST00000476930 EIF5AP63241 154 aaKnown RBP7.46□□□□□ -1.22
PTPRN-213ENST00000476930 CDPF1Q6NVV7 123 aa7.46□□□□□ -1.22
PTPRN-213ENST00000476930 BAGE2Q86Y30 109 aa7.46□□□□□ -1.22
PTPRN-213ENST00000476930 XGP55808 180 aa7.45□□□□□ -1.22
PTPRN-213ENST00000476930 DAZ4Q86SG3 579 aaKnown RBP7.45□□□□□ -1.22
PTPRN-213ENST00000476930 ZFP82Q8N141 532 aa7.45□□□□□ -1.22
PTPRN-213ENST00000476930 OR10AG1Q8NH19 301 aa7.45□□□□□ -1.22
PTPRN-213ENST00000476930 DERL1Q9BUN8 251 aa7.45□□□□□ -1.22
PTPRN-213ENST00000476930 DAZ3Q9NR90 486 aaKnown RBP7.45□□□□□ -1.22
PTPRN-213ENST00000476930 MUC21A0A0G2JKD1 596 aa7.44□□□□□ -1.22
PTPRN-213ENST00000476930 MUC21A0A140T8X8 626 aa7.44□□□□□ -1.22
PTPRN-213ENST00000476930 RPL35P42766 123 aaKnown RBP7.44□□□□□ -1.22
PTPRN-213ENST00000476930 PRR27Q6MZM9 219 aa7.44□□□□□ -1.22
PTPRN-213ENST00000476930 GNG13Q9P2W3 67 aa7.44□□□□□ -1.22
PTPRN-213ENST00000476930 HERC1Q15751 4861 aa7.44□□□□□ -1.22
PTPRN-213ENST00000476930 MYCBP2O75592 4640 aa7.43□□□□□ -1.22
PTPRN-213ENST00000476930 TRAV1-1A0A0B4J248 108 aa7.43□□□□□ -1.22
PTPRN-213ENST00000476930 GCSHP23434 173 aa7.43□□□□□ -1.22
PTPRN-213ENST00000476930 ANAPC16Q96DE5 110 aa7.43□□□□□ -1.22
PTPRN-213ENST00000476930 DNAJC30Q96LL9 226 aa7.43□□□□□ -1.22
PTPRN-213ENST00000476930 MANBALQ9NQG1 85 aa7.43□□□□□ -1.22
PTPRN-213ENST00000476930 SRRM2Q9UQ35 2752 aaKnown RBP7.42□□□□□ -1.22
PTPRN-213ENST00000476930 A0A087WWC5 75 aa7.42□□□□□ -1.22
PTPRN-213ENST00000476930 SNAI2O43623 268 aa7.42□□□□□ -1.22
PTPRN-213ENST00000476930 CXCL1P09341 107 aa7.42□□□□□ -1.22
PTPRN-213ENST00000476930 SSTP61278 116 aa7.42□□□□□ -1.22
PTPRN-213ENST00000476930 WFDC2Q14508 124 aa7.42□□□□□ -1.22
PTPRN-213ENST00000476930 LAGE3Q14657 143 aa7.42□□□□□ -1.22
PTPRN-213ENST00000476930 TCTE3Q8IZS6 198 aa7.42□□□□□ -1.22
PTPRN-213ENST00000476930 C11orf52Q96A22 123 aa7.42□□□□□ -1.22
PTPRN-213ENST00000476930 SSBP4Q9BWG4 385 aaPredicted RBP7.42□□□□□ -1.22
PTPRN-213ENST00000476930 IGLV5-52A0A0A0MRZ9 124 aa7.41□□□□□ -1.22
PTPRN-213ENST00000476930 TRBV10-1A0A0K0K1A3 114 aa7.41□□□□□ -1.22
PTPRN-213ENST00000476930 RAB19A4D1S5 217 aa7.41□□□□□ -1.22
PTPRN-213ENST00000476930 IGLV2-8P01709 118 aa7.41□□□□□ -1.22
PTPRN-213ENST00000476930 SULT1A2P50226 295 aa7.41□□□□□ -1.22
PTPRN-213ENST00000476930 RAB5CP51148 216 aa7.41□□□□□ -1.22
PTPRN-213ENST00000476930 UBE2D3P61077 147 aa7.41□□□□□ -1.22
PTPRN-213ENST00000476930 UBE2D2P62837 147 aa7.41□□□□□ -1.22
PTPRN-213ENST00000476930 HAMPP81172 84 aa7.41□□□□□ -1.22
PTPRN-213ENST00000476930 CENPWQ5EE01 88 aa7.41□□□□□ -1.22
PTPRN-213ENST00000476930 NIT1Q86X76 327 aa7.41□□□□□ -1.22
PTPRN-213ENST00000476930 Q8N814 137 aa7.41□□□□□ -1.22
PTPRN-213ENST00000476930 TRBV7-3A0A075B6L6 115 aa7.4□□□□□ -1.22
PTPRN-213ENST00000476930 LECT2O14960 151 aa7.4□□□□□ -1.22
PTPRN-213ENST00000476930 OR5AL1P0C617 328 aa7.4□□□□□ -1.22
PTPRN-213ENST00000476930 GZMBP10144 247 aa7.4□□□□□ -1.22
PTPRN-213ENST00000476930 RAB4BP61018 213 aa7.4□□□□□ -1.22
PTPRN-213ENST00000476930 RPL36AP83881 106 aaKnown RBP7.4□□□□□ -1.22
PTPRN-213ENST00000476930 ZNF56Q15929 161 aa7.4□□□□□ -1.22
PTPRN-213ENST00000476930 SPANXN1Q5VSR9 72 aa7.4□□□□□ -1.22
PTPRN-213ENST00000476930 EIF5AL1Q6IS14 154 aaKnown RBP7.4□□□□□ -1.22
PTPRN-213ENST00000476930 NEXN-AS1Q8NBZ9 246 aa7.4□□□□□ -1.22
PTPRN-213ENST00000476930 RPL36ALQ969Q0 106 aaKnown RBP7.4□□□□□ -1.22
PTPRN-213ENST00000476930 TM2D2Q9BX73 214 aa7.4□□□□□ -1.22
PTPRN-213ENST00000476930 FLG2Q5D862 2391 aaPredicted RBP7.39□□□□□ -1.23
PTPRN-213ENST00000476930 TRAV8-3A0A0A6YYJ7 113 aa7.39□□□□□ -1.23
PTPRN-213ENST00000476930 RBFOX3A6NFN3 312 aa7.39□□□□□ -1.23
PTPRN-213ENST00000476930 EPM2AB3EWF7 344 aa7.39□□□□□ -1.23
PTPRN-213ENST00000476930 C1QBP02746 253 aa7.39□□□□□ -1.23
PTPRN-213ENST00000476930 Q6ZNX1 250 aa7.39□□□□□ -1.23
PTPRN-213ENST00000476930 OR10G8Q8NGN5 311 aa7.39□□□□□ -1.23
PTPRN-213ENST00000476930 NTN5Q8WTR8 489 aaPredicted RBP7.39□□□□□ -1.23
PTPRN-213ENST00000476930 KLK12Q9UKR0 248 aa7.39□□□□□ -1.23
PTPRN-213ENST00000476930 KIF25-AS1Q9Y6Z4 181 aa7.39□□□□□ -1.23
PTPRN-213ENST00000476930 URGCP-MRPS24S4R325 110 aa7.39□□□□□ -1.23
PTPRN-213ENST00000476930 C19orf71A6NCJ1 209 aa7.38□□□□□ -1.23
PTPRN-213ENST00000476930 F5H697 171 aa7.38□□□□□ -1.23
PTPRN-213ENST00000476930 TEX46H3BTG2 121 aa7.38□□□□□ -1.23
PTPRN-213ENST00000476930 SMR3BP02814 79 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms