RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 RNASE7Q9H1E1 156 aaKnown RBP8.51□□□□□ -1.05
APTX-220ENST00000476858 Q9H8V8 135 aa8.51□□□□□ -1.05
APTX-220ENST00000476858 MSRB1Q9NZV6 116 aa8.51□□□□□ -1.05
APTX-220ENST00000476858 SNAI2O43623 268 aa8.5□□□□□ -1.05
APTX-220ENST00000476858 NXPH4O95158 308 aa8.5□□□□□ -1.05
APTX-220ENST00000476858 IGLC6P0CF74 106 aa8.5□□□□□ -1.05
APTX-220ENST00000476858 MRPL23Q16540 153 aaKnown RBP8.5□□□□□ -1.05
APTX-220ENST00000476858 FAM74A4Q5TZK3 123 aa8.5□□□□□ -1.05
APTX-220ENST00000476858 WFDC10BQ8IUB3 73 aa8.5□□□□□ -1.05
APTX-220ENST00000476858 OR2D3Q8NGH3 330 aa8.5□□□□□ -1.05
APTX-220ENST00000476858 UPK3BQ9BT76 320 aa8.5□□□□□ -1.05
APTX-220ENST00000476858 PHLDA3Q9Y5J5 127 aa8.5□□□□□ -1.05
APTX-220ENST00000476858 TNFRSF18Q9Y5U5 241 aa8.5□□□□□ -1.05
APTX-220ENST00000476858 HECTD4Q9Y4D8 3996 aa8.49□□□□□ -1.05
APTX-220ENST00000476858 LINC00694P0DN24 101 aa8.49□□□□□ -1.05
APTX-220ENST00000476858 SRIP30626 198 aa8.49□□□□□ -1.05
APTX-220ENST00000476858 SLAQ13239 276 aa8.49□□□□□ -1.05
APTX-220ENST00000476858 NEGR1Q7Z3B1 354 aa8.49□□□□□ -1.05
APTX-220ENST00000476858 EIF5A2Q9GZV4 153 aaKnown RBP8.49□□□□□ -1.05
APTX-220ENST00000476858 PKD1P98161 4303 aa8.49□□□□□ -1.05
APTX-220ENST00000476858 TRBV6-4A0A1B0GX49 114 aa8.48□□□□□ -1.05
APTX-220ENST00000476858 GAGE12JA6NER3 117 aa8.48□□□□□ -1.05
APTX-220ENST00000476858 A6NJY4 79 aa8.48□□□□□ -1.05
APTX-220ENST00000476858 A8MWV9 139 aa8.48□□□□□ -1.05
APTX-220ENST00000476858 TMEM250H0YL14 139 aa8.48□□□□□ -1.05
APTX-220ENST00000476858 CXCL1P09341 107 aa8.48□□□□□ -1.05
APTX-220ENST00000476858 OR5AL1P0C617 328 aa8.48□□□□□ -1.05
APTX-220ENST00000476858 MED14OSP0DP75 135 aa8.48□□□□□ -1.05
APTX-220ENST00000476858 TAGLN2P37802 199 aaKnown RBP8.48□□□□□ -1.05
APTX-220ENST00000476858 FAM3BP58499 235 aaPredicted RBP8.48□□□□□ -1.05
APTX-220ENST00000476858 GAGE1Q13065 139 aa8.48□□□□□ -1.05
APTX-220ENST00000476858 GAGE4Q13068 117 aa8.48□□□□□ -1.05
APTX-220ENST00000476858 GAGE5Q13069 117 aa8.48□□□□□ -1.05
APTX-220ENST00000476858 GAGE13Q4V321 117 aa8.48□□□□□ -1.05
APTX-220ENST00000476858 ZFP82Q8N141 532 aa8.48□□□□□ -1.05
APTX-220ENST00000476858 TPPP3Q9BW30 176 aa8.48□□□□□ -1.05
APTX-220ENST00000476858 A0A1B0GVY2 172 aa8.47□□□□□ -1.05
APTX-220ENST00000476858 P01737 135 aa8.47□□□□□ -1.05
APTX-220ENST00000476858 LINC00315P59091 139 aa8.47□□□□□ -1.05
APTX-220ENST00000476858 PIK3CD-AS1Q5SR53 167 aa8.47□□□□□ -1.05
APTX-220ENST00000476858 ZFP2Q6ZN57 461 aa8.47□□□□□ -1.05
APTX-220ENST00000476858 SYT8Q8NBV8 401 aa8.47□□□□□ -1.05
APTX-220ENST00000476858 KIF25-AS1Q9Y6Z4 181 aa8.47□□□□□ -1.05
APTX-220ENST00000476858 DNAH11Q96DT5 4516 aa8.47□□□□□ -1.05
APTX-220ENST00000476858 IFITM2Q01629 132 aa8.46□□□□□ -1.06
APTX-220ENST00000476858 RHOHQ15669 191 aa8.46□□□□□ -1.06
APTX-220ENST00000476858 LYZL1Q6UWQ5 148 aa8.46□□□□□ -1.06
APTX-220ENST00000476858 FER1L6-AS1Q8NA97 138 aa8.46□□□□□ -1.06
APTX-220ENST00000476858 GTSF1Q8WW33 167 aa8.46□□□□□ -1.06
APTX-220ENST00000476858 DAZAP1Q96EP5 407 aaKnown RBP8.46□□□□□ -1.06
APTX-220ENST00000476858 SMIM12Q96EX1 92 aa8.46□□□□□ -1.06
APTX-220ENST00000476858 SIVA1O15304 175 aa8.45□□□□□ -1.06
APTX-220ENST00000476858 C1orf134Q5TEV5 83 aa8.45□□□□□ -1.06
APTX-220ENST00000476858 LINC01551Q86U37 167 aa8.45□□□□□ -1.06
APTX-220ENST00000476858 SMIM7Q9BQ49 75 aa8.45□□□□□ -1.06
APTX-220ENST00000476858 PRADC1Q9BSG0 188 aa8.45□□□□□ -1.06
APTX-220ENST00000476858 RPP21Q9H633 154 aaKnown RBP8.45□□□□□ -1.06
APTX-220ENST00000476858 PRSS29PA6NIE9 313 aa8.44□□□□□ -1.06
APTX-220ENST00000476858 FOXA3P55318 350 aaPredicted RBP8.44□□□□□ -1.06
APTX-220ENST00000476858 SPANXN1Q5VSR9 72 aa8.44□□□□□ -1.06
APTX-220ENST00000476858 ZNF727A8MUV8 499 aa8.43□□□□□ -1.06
APTX-220ENST00000476858 C6orf223Q8N319 242 aa8.43□□□□□ -1.06
APTX-220ENST00000476858 ATP6V0E2Q8NHE4 81 aa8.43□□□□□ -1.06
APTX-220ENST00000476858 RHODO00212 210 aa8.42□□□□□ -1.06
APTX-220ENST00000476858 CIDEAO60543 219 aa8.42□□□□□ -1.06
APTX-220ENST00000476858 EVI2AP22794 236 aa8.42□□□□□ -1.06
APTX-220ENST00000476858 CTRLP40313 264 aa8.42□□□□□ -1.06
APTX-220ENST00000476858 RPS20P60866 119 aaKnown RBP8.42□□□□□ -1.06
APTX-220ENST00000476858 ZNF56Q15929 161 aa8.42□□□□□ -1.06
APTX-220ENST00000476858 Q6ZRN7 208 aaPredicted RBP8.42□□□□□ -1.06
APTX-220ENST00000476858 NEXN-AS1Q8NBZ9 246 aa8.42□□□□□ -1.06
APTX-220ENST00000476858 IGHV3-38A0A0C4DH36 116 aa8.41□□□□□ -1.06
APTX-220ENST00000476858 GATCO43716 136 aaKnown RBP8.41□□□□□ -1.06
APTX-220ENST00000476858 NTF3P20783 257 aa8.41□□□□□ -1.06
APTX-220ENST00000476858 RPL23P62829 140 aaKnown RBP8.41□□□□□ -1.06
APTX-220ENST00000476858 FAM231DQ6ZW35 169 aa8.41□□□□□ -1.06
APTX-220ENST00000476858 DEFB104AQ8WTQ1 72 aa8.41□□□□□ -1.06
APTX-220ENST00000476858 KRTAP9-9Q9BYP9 154 aa8.41□□□□□ -1.06
APTX-220ENST00000476858 KRTAP9-4Q9BYQ2 154 aa8.41□□□□□ -1.06
APTX-220ENST00000476858 GTSF1LQ9H1H1 148 aa8.41□□□□□ -1.06
APTX-220ENST00000476858 DYNC1H1Q14204 4646 aaKnown RBP8.41□□□□□ -1.06
APTX-220ENST00000476858 PKHD1P08F94 4074 aa8.4□□□□□ -1.06
APTX-220ENST00000476858 NDUFS6O75380 124 aaKnown RBP8.4□□□□□ -1.06
APTX-220ENST00000476858 IGHV3-30P01768 117 aa8.4□□□□□ -1.06
APTX-220ENST00000476858 IGHV3-33P01772 117 aa8.4□□□□□ -1.06
APTX-220ENST00000476858 MGPP08493 103 aa8.4□□□□□ -1.06
APTX-220ENST00000476858 DNAH10OSP0CZ25 163 aa8.4□□□□□ -1.06
APTX-220ENST00000476858 IGHV3-30-3P0DP02 117 aa8.4□□□□□ -1.06
APTX-220ENST00000476858 IGHV3-30-5P0DP03 117 aa8.4□□□□□ -1.06
APTX-220ENST00000476858 FUSP35637 526 aaKnown RBP eCLIP8.4□□□□□ -1.06
APTX-220ENST00000476858 TIRAPP58753 221 aa8.4□□□□□ -1.06
APTX-220ENST00000476858 ERVFC1-1P60608 527 aa8.4□□□□□ -1.06
APTX-220ENST00000476858 RAB4BP61018 213 aa8.4□□□□□ -1.06
APTX-220ENST00000476858 UBE2D3P61077 147 aa8.4□□□□□ -1.06
APTX-220ENST00000476858 UBE2D2P62837 147 aa8.4□□□□□ -1.06
APTX-220ENST00000476858 ISOC2Q96AB3 205 aa8.4□□□□□ -1.06
APTX-220ENST00000476858 PGLYRP4Q96LB8 373 aa8.4□□□□□ -1.06
APTX-220ENST00000476858 LY96Q9Y6Y9 160 aa8.4□□□□□ -1.06
APTX-220ENST00000476858 F5H697 171 aa8.39□□□□□ -1.07
APTX-220ENST00000476858 OR10J3Q5JRS4 329 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms