RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 F8VRH5 84 aa12.26□□□□□ -0.45
TMEM53-208ENST00000476724 DUSP14O95147 198 aaKnown RBP12.26□□□□□ -0.45
TMEM53-208ENST00000476724 CD7P09564 240 aa12.26□□□□□ -0.45
TMEM53-208ENST00000476724 ZNF688P0C7X2 276 aa12.26□□□□□ -0.45
TMEM53-208ENST00000476724 LINC00315P59091 139 aa12.26□□□□□ -0.45
TMEM53-208ENST00000476724 GTSCR1Q86UQ5 136 aa12.26□□□□□ -0.45
TMEM53-208ENST00000476724 TRAV12-3A0A0B4J271 114 aa12.26□□□□□ -0.45
TMEM53-208ENST00000476724 AMMECR1LQ6DCA0 310 aa12.26□□□□□ -0.45
TMEM53-208ENST00000476724 K7EP13 123 aa12.25□□□□□ -0.45
TMEM53-208ENST00000476724 SYNJ2BPP57105 145 aa12.25□□□□□ -0.45
TMEM53-208ENST00000476724 MUC4Q99102 2169 aa12.25□□□□□ -0.45
TMEM53-208ENST00000476724 C9orf118A6NHY6 69 aa12.25□□□□□ -0.45
TMEM53-208ENST00000476724 C2orf66Q6UXQ4 117 aa12.25□□□□□ -0.45
TMEM53-208ENST00000476724 TEX29Q8N6K0 151 aa12.25□□□□□ -0.45
TMEM53-208ENST00000476724 NEXN-AS1Q8NBZ9 246 aa12.25□□□□□ -0.45
TMEM53-208ENST00000476724 CSTL1Q9H114 145 aa12.25□□□□□ -0.45
TMEM53-208ENST00000476724 ESM1Q9NQ30 184 aa12.25□□□□□ -0.45
TMEM53-208ENST00000476724 DNAJC9-AS1A6NH13 148 aa12.24□□□□□ -0.45
TMEM53-208ENST00000476724 CDKN1BP46527 198 aa12.24□□□□□ -0.45
TMEM53-208ENST00000476724 ERASQ7Z444 233 aa12.24□□□□□ -0.45
TMEM53-208ENST00000476724 C9orf85Q96MD7 179 aa12.24□□□□□ -0.45
TMEM53-208ENST00000476724 CHTOPQ9Y3Y2 248 aaKnown RBP12.24□□□□□ -0.45
TMEM53-208ENST00000476724 TRAV8-6A0A0B4J262 113 aa12.23□□□□□ -0.45
TMEM53-208ENST00000476724 HOXD3P31249 432 aaPredicted RBP12.23□□□□□ -0.45
TMEM53-208ENST00000476724 SYT8Q8NBV8 401 aa12.23□□□□□ -0.45
TMEM53-208ENST00000476724 TRBV25-1A0A075B6N4 114 aa12.23□□□□□ -0.45
TMEM53-208ENST00000476724 IGHV3-16A0A0C4DH30 117 aa12.23□□□□□ -0.45
TMEM53-208ENST00000476724 Q8N2B8 174 aa12.23□□□□□ -0.45
TMEM53-208ENST00000476724 POLR2KP53803 58 aaKnown RBP12.22□□□□□ -0.45
TMEM53-208ENST00000476724 FOXI2Q6ZQN5 318 aa12.22□□□□□ -0.45
TMEM53-208ENST00000476724 TMEM86BQ8N661 226 aa12.22□□□□□ -0.45
TMEM53-208ENST00000476724 WFDC12Q8WWY7 111 aa12.22□□□□□ -0.45
TMEM53-208ENST00000476724 CHAC1Q9BUX1 264 aa12.22□□□□□ -0.45
TMEM53-208ENST00000476724 VCYO14598 125 aa12.22□□□□□ -0.45
TMEM53-208ENST00000476724 IGHV1OR15-1A0A075B7D0 117 aa12.21□□□□□ -0.45
TMEM53-208ENST00000476724 TAL2Q16559 108 aa12.21□□□□□ -0.45
TMEM53-208ENST00000476724 SUMO4Q6EEV6 95 aa12.21□□□□□ -0.45
TMEM53-208ENST00000476724 CYSLTR1Q9Y271 337 aa12.21□□□□□ -0.45
TMEM53-208ENST00000476724 NOTCH2Q04721 2471 aa12.21□□□□□ -0.46
TMEM53-208ENST00000476724 TRBV6-5A0A0K0K1A5 114 aa12.2□□□□□ -0.46
TMEM53-208ENST00000476724 GTF2H5Q6ZYL4 71 aa12.2□□□□□ -0.46
TMEM53-208ENST00000476724 BAALCQ8WXS3 180 aa12.2□□□□□ -0.46
TMEM53-208ENST00000476724 KIR2DL4Q99706 377 aa12.2□□□□□ -0.46
TMEM53-208ENST00000476724 F5H697 171 aa12.2□□□□□ -0.46
TMEM53-208ENST00000476724 TTTY13Q9BZ97 58 aa12.2□□□□□ -0.46
TMEM53-208ENST00000476724 GAGE10A6NGK3 116 aa12.19□□□□□ -0.46
TMEM53-208ENST00000476724 SMIM13P0DJ93 91 aa12.19□□□□□ -0.46
TMEM53-208ENST00000476724 Q6ZSV7 163 aa12.19□□□□□ -0.46
TMEM53-208ENST00000476724 Q8N1Y9 231 aa12.19□□□□□ -0.46
TMEM53-208ENST00000476724 TM2D2Q9BX73 214 aa12.19□□□□□ -0.46
TMEM53-208ENST00000476724 JPT2Q9H910 190 aa12.19□□□□□ -0.46
TMEM53-208ENST00000476724 TRAV12-2A0A075B6T6 113 aa12.18□□□□□ -0.46
TMEM53-208ENST00000476724 IGKV3-20P01619 116 aa12.18□□□□□ -0.46
TMEM53-208ENST00000476724 GCSHP23434 173 aa12.18□□□□□ -0.46
TMEM53-208ENST00000476724 TCTEX1D4Q5JR98 221 aa12.18□□□□□ -0.46
TMEM53-208ENST00000476724 HIST2H2BDQ6DRA6 164 aa12.18□□□□□ -0.46
TMEM53-208ENST00000476724 ZFP2Q6ZN57 461 aa12.18□□□□□ -0.46
TMEM53-208ENST00000476724 CBY1Q9Y3M2 126 aa12.18□□□□□ -0.46
TMEM53-208ENST00000476724 OTOGQ6ZRI0 2925 aa12.18□□□□□ -0.46
TMEM53-208ENST00000476724 A0A087WWL8 130 aa12.18□□□□□ -0.46
TMEM53-208ENST00000476724 TRBV27A0A0K0K1C4 114 aa12.18□□□□□ -0.46
TMEM53-208ENST00000476724 SPINK13Q1W4C9 94 aa12.18□□□□□ -0.46
TMEM53-208ENST00000476724 PAPPA-AS1Q5QFB9 102 aa12.18□□□□□ -0.46
TMEM53-208ENST00000476724 C18orf65Q6ZTR6 163 aa12.18□□□□□ -0.46
TMEM53-208ENST00000476724 MDFICQ9P1T7 246 aa12.18□□□□□ -0.46
TMEM53-208ENST00000476724 MTORP42345 2549 aa12.18□□□□□ -0.46
TMEM53-208ENST00000476724 TRGV11A0A075B6L2 103 aa12.17□□□□□ -0.46
TMEM53-208ENST00000476724 TRAV2A0A0B4J234 112 aa12.17□□□□□ -0.46
TMEM53-208ENST00000476724 PRSS29PA6NIE9 313 aa12.17□□□□□ -0.46
TMEM53-208ENST00000476724 OR11H12B2RN74 326 aa12.17□□□□□ -0.46
TMEM53-208ENST00000476724 H3BUT2 72 aa12.17□□□□□ -0.46
TMEM53-208ENST00000476724 LY6G6DO95868 133 aa12.17□□□□□ -0.46
TMEM53-208ENST00000476724 AMTNQ6UX39 209 aa12.17□□□□□ -0.46
TMEM53-208ENST00000476724 CEND1Q8N111 149 aa12.17□□□□□ -0.46
TMEM53-208ENST00000476724 MAPKAPK5-AS1Q8N8E1 139 aa12.17□□□□□ -0.46
TMEM53-208ENST00000476724 OR11H1Q8NG94 326 aa12.17□□□□□ -0.46
TMEM53-208ENST00000476724 OR11H2Q8NH07 326 aa12.17□□□□□ -0.46
TMEM53-208ENST00000476724 TMEM141Q96I45 108 aa12.17□□□□□ -0.46
TMEM53-208ENST00000476724 LINC01619G3V211 115 aa12.17□□□□□ -0.46
TMEM53-208ENST00000476724 SDHAF1A6NFY7 115 aa12.16□□□□□ -0.46
TMEM53-208ENST00000476724 RIPPLY3P57055 190 aa12.16□□□□□ -0.46
TMEM53-208ENST00000476724 PEMTQ9UBM1 199 aa12.16□□□□□ -0.46
TMEM53-208ENST00000476724 IGIPA6NJ69 53 aa12.15□□□□□ -0.46
TMEM53-208ENST00000476724 CRYGDP07320 174 aa12.15□□□□□ -0.46
TMEM53-208ENST00000476724 FXYD2P54710 66 aa12.15□□□□□ -0.46
TMEM53-208ENST00000476724 UFSP1Q6NVU6 142 aa12.15□□□□□ -0.46
TMEM53-208ENST00000476724 TIMM17AQ99595 171 aa12.15□□□□□ -0.46
TMEM53-208ENST00000476724 MYMXA0A1B0GTQ4 84 aa12.15□□□□□ -0.46
TMEM53-208ENST00000476724 GAGE12BA1L429 117 aa12.15□□□□□ -0.46
TMEM53-208ENST00000476724 E9PLD3 99 aa12.15□□□□□ -0.46
TMEM53-208ENST00000476724 TP53TG1Q9Y2A0 90 aa12.15□□□□□ -0.46
TMEM53-208ENST00000476724 A8MTW9 85 aa12.14□□□□□ -0.47
TMEM53-208ENST00000476724 M0QY20 66 aa12.14□□□□□ -0.47
TMEM53-208ENST00000476724 FAM74A4Q5TZK3 123 aa12.14□□□□□ -0.47
TMEM53-208ENST00000476724 NEGR1Q7Z3B1 354 aa12.14□□□□□ -0.47
TMEM53-208ENST00000476724 TRPT1Q86TN4 253 aaKnown RBP12.14□□□□□ -0.47
TMEM53-208ENST00000476724 RNASE8Q8TDE3 154 aaKnown RBP12.14□□□□□ -0.47
TMEM53-208ENST00000476724 RAB37Q96AX2 223 aa12.14□□□□□ -0.47
TMEM53-208ENST00000476724 ZNF256Q9Y2P7 627 aaPredicted RBP12.14□□□□□ -0.47
TMEM53-208ENST00000476724 NF1P21359 2839 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms