RNA–Protein interactions for RNA: ENST00000475627.1

HLA-DMA-207, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 984 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-207ENST00000475627 KCNIP4Q6PIL6 250 aa5.9□□□□□ -1.46
HLA-DMA-207ENST00000475627 IL17DQ8TAD2 202 aa5.9□□□□□ -1.46
HLA-DMA-207ENST00000475627 IL36BQ9NZH7 164 aa5.9□□□□□ -1.46
HLA-DMA-207ENST00000475627 TP53TG3Q9ULZ0 132 aa5.9□□□□□ -1.46
HLA-DMA-207ENST00000475627 PHLDA3Q9Y5J5 127 aa5.9□□□□□ -1.46
HLA-DMA-207ENST00000475627 IGHV4-28A0A0C4DH34 117 aa5.89□□□□□ -1.47
HLA-DMA-207ENST00000475627 TYMSP04818 313 aa5.89□□□□□ -1.47
HLA-DMA-207ENST00000475627 CACNG7P62955 275 aa5.89□□□□□ -1.47
HLA-DMA-207ENST00000475627 DAZ2Q13117 558 aaKnown RBP5.89□□□□□ -1.47
HLA-DMA-207ENST00000475627 Q75L30 129 aa5.89□□□□□ -1.47
HLA-DMA-207ENST00000475627 SMIM15Q7Z3B0 74 aa5.89□□□□□ -1.47
HLA-DMA-207ENST00000475627 FER1L6-AS1Q8NA97 138 aa5.89□□□□□ -1.47
HLA-DMA-207ENST00000475627 TSKUQ8WUA8 353 aa5.89□□□□□ -1.47
HLA-DMA-207ENST00000475627 RNASE7Q9H1E1 156 aaKnown RBP5.89□□□□□ -1.47
HLA-DMA-207ENST00000475627 NAT8BQ9UHF3 227 aa5.89□□□□□ -1.47
HLA-DMA-207ENST00000475627 A0A087WWC5 75 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 TMSB15BA0A087X1C1 80 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 IGHV3-16A0A0C4DH30 117 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 A0A1B0GW15 77 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 M0R2P5 195 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 OR5AL1P0C617 328 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 RBMY1A1P0DJD3 496 aaKnown RBP5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 RBMY1CP0DJD4 496 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 RAB5AP20339 215 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 CRIP1P50238 77 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 RBMY1FQ15415 496 aaKnown RBP5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 SPANXN1Q5VSR9 72 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 Q8NAQ8 132 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 PTH2Q96A98 100 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 IMMP2LQ96T52 175 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 RPS10P5Q9NQ39 176 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 TMEM242Q9NWH2 141 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 U3KQK5 164 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 CMYA5Q8N3K9 4069 aa5.88□□□□□ -1.47
HLA-DMA-207ENST00000475627 TRGV2A0A075B6R0 118 aa5.87□□□□□ -1.47
HLA-DMA-207ENST00000475627 TRGV1A0A0A0MS02 117 aa5.87□□□□□ -1.47
HLA-DMA-207ENST00000475627 IGKV3D-20A0A0C4DH25 116 aa5.87□□□□□ -1.47
HLA-DMA-207ENST00000475627 A8MWV9 139 aa5.87□□□□□ -1.47
HLA-DMA-207ENST00000475627 H3BVH4 76 aa5.87□□□□□ -1.47
HLA-DMA-207ENST00000475627 ARMS2P0C7Q2 107 aa5.87□□□□□ -1.47
HLA-DMA-207ENST00000475627 TRGC1P0CF51 173 aa5.87□□□□□ -1.47
HLA-DMA-207ENST00000475627 SMIM17P0DL12 118 aa5.87□□□□□ -1.47
HLA-DMA-207ENST00000475627 EMP1P54849 157 aa5.87□□□□□ -1.47
HLA-DMA-207ENST00000475627 DAD1P61803 113 aa5.87□□□□□ -1.47
HLA-DMA-207ENST00000475627 FABP9Q0Z7S8 132 aa5.87□□□□□ -1.47
HLA-DMA-207ENST00000475627 COTL1Q14019 142 aa5.87□□□□□ -1.47
HLA-DMA-207ENST00000475627 AP1S3Q96PC3 154 aa5.87□□□□□ -1.47
HLA-DMA-207ENST00000475627 RETNQ9HD89 108 aa5.87□□□□□ -1.47
HLA-DMA-207ENST00000475627 TRAV9-1A0A075B6T8 112 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 TRAV26-1A0A087WT03 109 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 GRIFINA4D1Z8 144 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 HIGD1CA8MV81 97 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 GNRH2O43555 120 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 SNAI2O43623 268 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 AZU1P20160 251 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 HOXA5P20719 270 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 CTRLP40313 264 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 RIGQ13278 110 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 ZNF876PQ49A33 203 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 ATP5L2Q7Z4Y8 100 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 C11orf72Q8NBR9 251 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 C11orf45Q8TAV5 145 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 C9orf85Q96MD7 179 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 ALKBH7Q9BT30 221 aaPredicted RBP5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 NOP10Q9NPE3 64 aaKnown RBP5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 NIT2Q9NQR4 276 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 C11orf21Q9P2W6 132 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 V9GYV3 84 aa5.86□□□□□ -1.47
HLA-DMA-207ENST00000475627 A0A0J9YWU9 116 aa5.85□□□□□ -1.47
HLA-DMA-207ENST00000475627 A0A1B0GUT8 65 aa5.85□□□□□ -1.47
HLA-DMA-207ENST00000475627 M0R381 172 aa5.85□□□□□ -1.47
HLA-DMA-207ENST00000475627 SPINK4O60575 86 aa5.85□□□□□ -1.47
HLA-DMA-207ENST00000475627 IGLC6P0CF74 106 aa5.85□□□□□ -1.47
HLA-DMA-207ENST00000475627 RNASE3P12724 160 aaKnown RBP5.85□□□□□ -1.47
HLA-DMA-207ENST00000475627 FOXA3P55318 350 aaPredicted RBP5.85□□□□□ -1.47
HLA-DMA-207ENST00000475627 SLAQ13239 276 aa5.85□□□□□ -1.47
HLA-DMA-207ENST00000475627 COX19Q49B96 90 aa5.85□□□□□ -1.47
HLA-DMA-207ENST00000475627 FAM222AQ5U5X8 452 aa5.85□□□□□ -1.47
HLA-DMA-207ENST00000475627 RASL10AQ92737 203 aa5.85□□□□□ -1.47
HLA-DMA-207ENST00000475627 C18orf15Q96N68 181 aa5.85□□□□□ -1.47
HLA-DMA-207ENST00000475627 CNFNQ9BYD5 112 aa5.85□□□□□ -1.47
HLA-DMA-207ENST00000475627 SCRT2Q9NQ03 307 aa5.85□□□□□ -1.47
HLA-DMA-207ENST00000475627 MDFICQ9P1T7 246 aa5.85□□□□□ -1.47
HLA-DMA-207ENST00000475627 DNAH3Q8TD57 4116 aa5.84□□□□□ -1.47
HLA-DMA-207ENST00000475627 FBN3Q75N90 2809 aa5.84□□□□□ -1.47
HLA-DMA-207ENST00000475627 MEGF8Q7Z7M0 2845 aa5.84□□□□□ -1.47
HLA-DMA-207ENST00000475627 SMIM27A0A1W2PRY6 76 aa5.84□□□□□ -1.47
HLA-DMA-207ENST00000475627 IFITM10A6NMD0 228 aa5.84□□□□□ -1.47
HLA-DMA-207ENST00000475627 NXPH4O95158 308 aa5.84□□□□□ -1.47
HLA-DMA-207ENST00000475627 ATP5G1P05496 136 aa5.84□□□□□ -1.47
HLA-DMA-207ENST00000475627 TWIST1Q15672 202 aa5.84□□□□□ -1.47
HLA-DMA-207ENST00000475627 RASL11AQ6T310 242 aa5.84□□□□□ -1.47
HLA-DMA-207ENST00000475627 IGHV4-4A0A075B6R2 117 aa5.83□□□□□ -1.48
HLA-DMA-207ENST00000475627 TRAV4A0A0B4J268 109 aa5.83□□□□□ -1.48
HLA-DMA-207ENST00000475627 GAGE7O76087 117 aa5.83□□□□□ -1.48
HLA-DMA-207ENST00000475627 GAGE12FP0CL80 117 aa5.83□□□□□ -1.48
HLA-DMA-207ENST00000475627 GAGE12GP0CL81 117 aa5.83□□□□□ -1.48
HLA-DMA-207ENST00000475627 GAGE12IP0CL82 117 aa5.83□□□□□ -1.48
HLA-DMA-207ENST00000475627 DEFB130BP0DP73 79 aa5.83□□□□□ -1.48
HLA-DMA-207ENST00000475627 DEFB130AP0DP74 79 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms