RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 DNLZQ5SXM8 178 aa4.63□□□□□ -1.67
HDAC3-207ENST00000475549 Q86TA4 180 aa4.63□□□□□ -1.67
HDAC3-207ENST00000475549 INO80EQ8NBZ0 244 aaPredicted RBP4.63□□□□□ -1.67
HDAC3-207ENST00000475549 IL36BQ9NZH7 164 aa4.63□□□□□ -1.67
HDAC3-207ENST00000475549 DNAH8Q96JB1 4490 aa4.62□□□□□ -1.67
HDAC3-207ENST00000475549 A0A087WWL8 130 aa4.62□□□□□ -1.67
HDAC3-207ENST00000475549 FXYD6-FXYD2A0A087WZ82 144 aa4.62□□□□□ -1.67
HDAC3-207ENST00000475549 CTXND1A0A1B0GTU2 59 aa4.62□□□□□ -1.67
HDAC3-207ENST00000475549 B4DEV8 164 aa4.62□□□□□ -1.67
HDAC3-207ENST00000475549 H3BVH4 76 aa4.62□□□□□ -1.67
HDAC3-207ENST00000475549 SH2D1AO60880 128 aa4.62□□□□□ -1.67
HDAC3-207ENST00000475549 LTAP01374 205 aa4.62□□□□□ -1.67
HDAC3-207ENST00000475549 IFNA7P01567 189 aa4.62□□□□□ -1.67
HDAC3-207ENST00000475549 S100A4P26447 101 aaKnown RBP4.62□□□□□ -1.67
HDAC3-207ENST00000475549 ZNF674Q2M3X9 581 aa4.62□□□□□ -1.67
HDAC3-207ENST00000475549 Q6ZSA8 131 aa4.62□□□□□ -1.67
HDAC3-207ENST00000475549 BAALCQ8WXS3 180 aa4.62□□□□□ -1.67
HDAC3-207ENST00000475549 HIST1H2BAQ96A08 127 aa4.62□□□□□ -1.67
HDAC3-207ENST00000475549 BATF3Q9NR55 127 aa4.62□□□□□ -1.67
HDAC3-207ENST00000475549 TMSB15BA0A087X1C1 80 aa4.61□□□□□ -1.67
HDAC3-207ENST00000475549 BORCS7-ASMTA0A0B4J1R7 106 aa4.61□□□□□ -1.67
HDAC3-207ENST00000475549 SMLR1H3BR10 107 aa4.61□□□□□ -1.67
HDAC3-207ENST00000475549 C1QBP02746 253 aa4.61□□□□□ -1.67
HDAC3-207ENST00000475549 FAM74A4Q5TZK3 123 aa4.61□□□□□ -1.67
HDAC3-207ENST00000475549 NIT1Q86X76 327 aa4.61□□□□□ -1.67
HDAC3-207ENST00000475549 SFRP2Q96HF1 295 aa4.61□□□□□ -1.67
HDAC3-207ENST00000475549 NKX6-2Q9C056 277 aaPredicted RBP4.61□□□□□ -1.67
HDAC3-207ENST00000475549 ZFP30Q9Y2G7 519 aa4.61□□□□□ -1.67
HDAC3-207ENST00000475549 hCG_2014768A0A024R1R8 64 aa4.6□□□□□ -1.67
HDAC3-207ENST00000475549 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.6□□□□□ -1.67
HDAC3-207ENST00000475549 TRAV8-3A0A0A6YYJ7 113 aa4.6□□□□□ -1.67
HDAC3-207ENST00000475549 TRBV6-1A0A0K0K1D8 114 aa4.6□□□□□ -1.67
HDAC3-207ENST00000475549 MAP1LC3B2A6NCE7 125 aa4.6□□□□□ -1.67
HDAC3-207ENST00000475549 ARPC5O15511 151 aa4.6□□□□□ -1.67
HDAC3-207ENST00000475549 KRTAP10-4P60372 401 aaPredicted RBP4.6□□□□□ -1.67
HDAC3-207ENST00000475549 FAM162BQ5T6X4 162 aa4.6□□□□□ -1.67
HDAC3-207ENST00000475549 FMC1Q96HJ9 113 aa4.6□□□□□ -1.67
HDAC3-207ENST00000475549 TM2D2Q9BX73 214 aa4.6□□□□□ -1.67
HDAC3-207ENST00000475549 MAP1LC3BQ9GZQ8 125 aa4.6□□□□□ -1.67
HDAC3-207ENST00000475549 KLK12Q9UKR0 248 aa4.6□□□□□ -1.67
HDAC3-207ENST00000475549 A0A087WWC5 75 aa4.59□□□□□ -1.67
HDAC3-207ENST00000475549 M0R381 172 aa4.59□□□□□ -1.67
HDAC3-207ENST00000475549 RHODO00212 210 aa4.59□□□□□ -1.67
HDAC3-207ENST00000475549 PAGE4O60829 102 aa4.59□□□□□ -1.67
HDAC3-207ENST00000475549 UBE2D3P61077 147 aa4.59□□□□□ -1.67
HDAC3-207ENST00000475549 UBE2D2P62837 147 aa4.59□□□□□ -1.67
HDAC3-207ENST00000475549 RPL19P84098 196 aaKnown RBP4.59□□□□□ -1.67
HDAC3-207ENST00000475549 AKR1C8PQ5T2L2 129 aa4.59□□□□□ -1.67
HDAC3-207ENST00000475549 CST9LP1Q5W188 147 aa4.59□□□□□ -1.67
HDAC3-207ENST00000475549 ATRAIDQ6UW56 229 aa4.59□□□□□ -1.67
HDAC3-207ENST00000475549 ENHOQ6UWT2 76 aa4.59□□□□□ -1.67
HDAC3-207ENST00000475549 SYT8Q8NBV8 401 aa4.59□□□□□ -1.67
HDAC3-207ENST00000475549 OR11H4Q8NGC9 324 aa4.59□□□□□ -1.67
HDAC3-207ENST00000475549 MLST8Q9BVC4 326 aa4.59□□□□□ -1.67
HDAC3-207ENST00000475549 SSBP4Q9BWG4 385 aaPredicted RBP4.59□□□□□ -1.67
HDAC3-207ENST00000475549 PHLDA3Q9Y5J5 127 aa4.59□□□□□ -1.67
HDAC3-207ENST00000475549 LRP1Q07954 4544 aaKnown RBP4.58□□□□□ -1.68
HDAC3-207ENST00000475549 TRBV7-3A0A075B6L6 115 aa4.58□□□□□ -1.68
HDAC3-207ENST00000475549 MUC21A0A0G2JKD1 596 aa4.58□□□□□ -1.68
HDAC3-207ENST00000475549 MUC21A0A140T8X8 626 aa4.58□□□□□ -1.68
HDAC3-207ENST00000475549 UBE2G1P62253 170 aa4.58□□□□□ -1.68
HDAC3-207ENST00000475549 ANKRD39Q53RE8 183 aa4.58□□□□□ -1.68
HDAC3-207ENST00000475549 PRR27Q6MZM9 219 aa4.58□□□□□ -1.68
HDAC3-207ENST00000475549 SCXQ7RTU7 201 aa4.58□□□□□ -1.68
HDAC3-207ENST00000475549 OR10G8Q8NGN5 311 aa4.58□□□□□ -1.68
HDAC3-207ENST00000475549 OR10AG1Q8NH19 301 aa4.58□□□□□ -1.68
HDAC3-207ENST00000475549 SFT2D1Q8WV19 159 aa4.58□□□□□ -1.68
HDAC3-207ENST00000475549 MBD3L1Q8WWY6 194 aa4.58□□□□□ -1.68
HDAC3-207ENST00000475549 IGKV2D-24A0A075B6R9 120 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 TRBV10-1A0A0K0K1A3 114 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 A0A1B0GV50 99 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 SCO2A0A1W2PP80 73 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 TPT1P13693 172 aaKnown RBP4.57□□□□□ -1.68
HDAC3-207ENST00000475549 AKR1C3P42330 323 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 CCL20P78556 96 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 TOR2AQ5JU69 321 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 NTM-AS1Q6ZSK4 140 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 ZFP82Q8N141 532 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 KCNRGQ8N5I3 272 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 Q8N976 141 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 NEXN-AS1Q8NBZ9 246 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 CIRBP-AS1Q8TBR5 109 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 UBE2WQ96B02 151 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 TCEAL7Q9BRU2 100 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 COX11Q9Y6N1 276 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 KIF25-AS1Q9Y6Z4 181 aa4.57□□□□□ -1.68
HDAC3-207ENST00000475549 TRBV6-8A0A0A6YYG3 113 aa4.56□□□□□ -1.68
HDAC3-207ENST00000475549 RBFOX3A6NFN3 312 aa4.56□□□□□ -1.68
HDAC3-207ENST00000475549 KRTAP29-1A8MX34 341 aaPredicted RBP4.56□□□□□ -1.68
HDAC3-207ENST00000475549 SNAI2O43623 268 aa4.56□□□□□ -1.68
HDAC3-207ENST00000475549 SEC11BP0C7V7 166 aa4.56□□□□□ -1.68
HDAC3-207ENST00000475549 RAB4BP61018 213 aa4.56□□□□□ -1.68
HDAC3-207ENST00000475549 SSTP61278 116 aa4.56□□□□□ -1.68
HDAC3-207ENST00000475549 RPL36AP83881 106 aaKnown RBP4.56□□□□□ -1.68
HDAC3-207ENST00000475549 ZNF345Q14585 488 aa4.56□□□□□ -1.68
HDAC3-207ENST00000475549 C21orf62-AS1Q17RA5 79 aa4.56□□□□□ -1.68
HDAC3-207ENST00000475549 RGS21Q2M5E4 152 aa4.56□□□□□ -1.68
HDAC3-207ENST00000475549 MPV17L2Q567V2 206 aa4.56□□□□□ -1.68
HDAC3-207ENST00000475549 TMUB2Q71RG4 321 aa4.56□□□□□ -1.68
HDAC3-207ENST00000475549 BAGE2Q86Y30 109 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 324.9 ms