RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 OR10AG1Q8NH19 301 aa11.16□□□□□ -0.62
CPSF3-203ENST00000475482 C9orf85Q96MD7 179 aa11.16□□□□□ -0.62
CPSF3-203ENST00000475482 SPXQ9BT56 116 aa11.16□□□□□ -0.62
CPSF3-203ENST00000475482 TMEM191AQ9H0A3 160 aa11.16□□□□□ -0.62
CPSF3-203ENST00000475482 TP53TG3Q9ULZ0 132 aa11.16□□□□□ -0.62
CPSF3-203ENST00000475482 SMIM9A6NGZ8 99 aa11.15□□□□□ -0.62
CPSF3-203ENST00000475482 M0R381 172 aa11.15□□□□□ -0.62
CPSF3-203ENST00000475482 SSTP61278 116 aa11.15□□□□□ -0.62
CPSF3-203ENST00000475482 C1orf158Q8N1D5 194 aa11.15□□□□□ -0.62
CPSF3-203ENST00000475482 CELA1Q9UNI1 258 aa11.15□□□□□ -0.62
CPSF3-203ENST00000475482 IGHV3OR16-12A0A075B7B8 117 aa11.14□□□□□ -0.63
CPSF3-203ENST00000475482 MUC21A0A0G2JKD1 596 aa11.14□□□□□ -0.63
CPSF3-203ENST00000475482 MUC21A0A140T8X8 626 aa11.14□□□□□ -0.63
CPSF3-203ENST00000475482 NXPH4O95158 308 aa11.14□□□□□ -0.63
CPSF3-203ENST00000475482 S100A6P06703 90 aa11.14□□□□□ -0.63
CPSF3-203ENST00000475482 C12orf74Q32Q52 190 aa11.14□□□□□ -0.63
CPSF3-203ENST00000475482 PIK3CD-AS1Q5SR53 167 aa11.14□□□□□ -0.63
CPSF3-203ENST00000475482 Q6ZTC4 211 aa11.14□□□□□ -0.63
CPSF3-203ENST00000475482 AP1S3Q96PC3 154 aa11.14□□□□□ -0.63
CPSF3-203ENST00000475482 APLNQ9ULZ1 77 aa11.14□□□□□ -0.63
CPSF3-203ENST00000475482 TMEM263Q8WUH6 116 aaKnown RBP11.13□□□□□ -0.63
CPSF3-203ENST00000475482 PTH2Q96A98 100 aa11.13□□□□□ -0.63
CPSF3-203ENST00000475482 NDUFAF3Q9BU61 184 aa11.13□□□□□ -0.63
CPSF3-203ENST00000475482 MDFICQ9P1T7 246 aa11.13□□□□□ -0.63
CPSF3-203ENST00000475482 TRAV10A0A0B4J240 114 aa11.12□□□□□ -0.63
CPSF3-203ENST00000475482 M0R2P5 195 aa11.12□□□□□ -0.63
CPSF3-203ENST00000475482 PHOX2AO14813 284 aa11.12□□□□□ -0.63
CPSF3-203ENST00000475482 SMIM17P0DL12 118 aa11.12□□□□□ -0.63
CPSF3-203ENST00000475482 SLAQ13239 276 aa11.12□□□□□ -0.63
CPSF3-203ENST00000475482 RRN3P1Q2M238 152 aa11.12□□□□□ -0.63
CPSF3-203ENST00000475482 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
CPSF3-203ENST00000475482 FAM104BQ5XKR9 115 aa11.12□□□□□ -0.63
CPSF3-203ENST00000475482 C16orf74Q96GX8 76 aa11.12□□□□□ -0.63
CPSF3-203ENST00000475482 DNAH10Q8IVF4 4471 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 DNAH6Q9C0G6 4158 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 HIST1H2BKO60814 126 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 PPBPP02775 128 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 HIST1H2BJP06899 126 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 HIST1H2BOP23527 126 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 HIST1H2BBP33778 126 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 HIST1H2BDP58876 126 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 HIST1H2BCP62807 126 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 HIST2H2BEQ16778 126 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.11□□□□□ -0.63
CPSF3-203ENST00000475482 HIST1H2BHQ93079 126 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 HIST1H2BNQ99877 126 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 HIST1H2BMQ99879 126 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 DPH3P1Q9H4G8 78 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 MSRB1Q9NZV6 116 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 FRAS1Q86XX4 4008 aa11.11□□□□□ -0.63
CPSF3-203ENST00000475482 IGLL5B9A064 214 aa11.1□□□□□ -0.63
CPSF3-203ENST00000475482 ZNF876PQ49A33 203 aa11.1□□□□□ -0.63
CPSF3-203ENST00000475482 C11orf72Q8NBR9 251 aa11.09□□□□□ -0.63
CPSF3-203ENST00000475482 RNASE8Q8TDE3 154 aaKnown RBP11.09□□□□□ -0.63
CPSF3-203ENST00000475482 GSN-AS1Q9NRJ2 163 aa11.09□□□□□ -0.63
CPSF3-203ENST00000475482 A8MWV9 139 aa11.08□□□□□ -0.64
CPSF3-203ENST00000475482 EVI2AP22794 236 aa11.08□□□□□ -0.64
CPSF3-203ENST00000475482 SRIP30626 198 aa11.08□□□□□ -0.64
CPSF3-203ENST00000475482 CKS2P33552 79 aa11.08□□□□□ -0.64
CPSF3-203ENST00000475482 KIAA1644Q3SXP7 199 aa11.08□□□□□ -0.64
CPSF3-203ENST00000475482 OR10J3Q5JRS4 329 aa11.08□□□□□ -0.64
CPSF3-203ENST00000475482 AMN1Q8IY45 258 aa11.08□□□□□ -0.64
CPSF3-203ENST00000475482 ORMDL3Q8N138 153 aa11.08□□□□□ -0.64
CPSF3-203ENST00000475482 MRAP2Q96G30 205 aa11.08□□□□□ -0.64
CPSF3-203ENST00000475482 DKK2Q9UBU2 259 aa11.08□□□□□ -0.64
CPSF3-203ENST00000475482 LAMTOR2Q9Y2Q5 125 aa11.08□□□□□ -0.64
CPSF3-203ENST00000475482 DEFB131BA0A096LNP1 70 aa11.07□□□□□ -0.64
CPSF3-203ENST00000475482 SPART-AS1P0CW21 52 aa11.07□□□□□ -0.64
CPSF3-203ENST00000475482 RAB4AP20338 218 aa11.07□□□□□ -0.64
CPSF3-203ENST00000475482 NDUFA6P56556 154 aa11.07□□□□□ -0.64
CPSF3-203ENST00000475482 DAZ2Q13117 558 aaKnown RBP11.07□□□□□ -0.64
CPSF3-203ENST00000475482 LGALS9BQ3B8N2 356 aa11.07□□□□□ -0.64
CPSF3-203ENST00000475482 ALKBH7Q9BT30 221 aaPredicted RBP11.07□□□□□ -0.64
CPSF3-203ENST00000475482 TEX48A0A1B0GUV7 120 aa11.06□□□□□ -0.64
CPSF3-203ENST00000475482 PPP1R17O96001 155 aa11.06□□□□□ -0.64
CPSF3-203ENST00000475482 AZU1P20160 251 aa11.06□□□□□ -0.64
CPSF3-203ENST00000475482 Q0VG73 95 aa11.06□□□□□ -0.64
CPSF3-203ENST00000475482 MRPL51Q4U2R6 128 aaKnown RBP11.06□□□□□ -0.64
CPSF3-203ENST00000475482 C14orf178Q8N769 122 aaPredicted RBP11.06□□□□□ -0.64
CPSF3-203ENST00000475482 RHODO00212 210 aa11.05□□□□□ -0.64
CPSF3-203ENST00000475482 FAM222AQ5U5X8 452 aa11.05□□□□□ -0.64
CPSF3-203ENST00000475482 BAGE3Q86Y29 109 aa11.05□□□□□ -0.64
CPSF3-203ENST00000475482 RASL10AQ92737 203 aa11.05□□□□□ -0.64
CPSF3-203ENST00000475482 RNF185Q96GF1 192 aa11.05□□□□□ -0.64
CPSF3-203ENST00000475482 MUC4Q99102 2169 aa11.04□□□□□ -0.64
CPSF3-203ENST00000475482 D6R8Y8 96 aa11.04□□□□□ -0.64
CPSF3-203ENST00000475482 MGPP08493 103 aa11.04□□□□□ -0.64
CPSF3-203ENST00000475482 EMP1P54849 157 aa11.04□□□□□ -0.64
CPSF3-203ENST00000475482 COA6Q5JTJ3 125 aaKnown RBP11.04□□□□□ -0.64
CPSF3-203ENST00000475482 PRELID3AQ96N28 172 aa11.04□□□□□ -0.64
CPSF3-203ENST00000475482 CIDEAO60543 219 aa11.03□□□□□ -0.64
CPSF3-203ENST00000475482 PRM2P04554 102 aa11.03□□□□□ -0.64
CPSF3-203ENST00000475482 POM121L12Q8N7R1 296 aa11.03□□□□□ -0.64
CPSF3-203ENST00000475482 TRGV1A0A0A0MS02 117 aa11.02□□□□□ -0.65
CPSF3-203ENST00000475482 F5H697 171 aa11.02□□□□□ -0.65
CPSF3-203ENST00000475482 H7C1H1 209 aa11.02□□□□□ -0.65
CPSF3-203ENST00000475482 C18orf32Q8TCD1 76 aa11.02□□□□□ -0.65
CPSF3-203ENST00000475482 MRPL16Q9NX20 251 aaKnown RBP11.02□□□□□ -0.65
CPSF3-203ENST00000475482 KIF25-AS1Q9Y6Z4 181 aa11.02□□□□□ -0.65
CPSF3-203ENST00000475482 A0A087WWL8 130 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms