RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 FN1P02751 2386 aaKnown RBP13.44□□□□□ -0.26
SEC61A2-213ENST00000475268 PRM2P04554 102 aa13.43□□□□□ -0.26
SEC61A2-213ENST00000475268 FCER1GP30273 86 aa13.43□□□□□ -0.26
SEC61A2-213ENST00000475268 TRAV9-2A0A087WT02 112 aa13.42□□□□□ -0.26
SEC61A2-213ENST00000475268 TCAPO15273 167 aa13.42□□□□□ -0.26
SEC61A2-213ENST00000475268 CRLF1O75462 422 aa13.42□□□□□ -0.26
SEC61A2-213ENST00000475268 IGLV1-51P01701 117 aa13.42□□□□□ -0.26
SEC61A2-213ENST00000475268 SUMO2P61956 95 aaKnown RBP13.42□□□□□ -0.26
SEC61A2-213ENST00000475268 FAM74A4Q5TZK3 123 aa13.42□□□□□ -0.26
SEC61A2-213ENST00000475268 POM121L12Q8N7R1 296 aa13.42□□□□□ -0.26
SEC61A2-213ENST00000475268 C14orf144Q96I85 54 aa13.42□□□□□ -0.26
SEC61A2-213ENST00000475268 PMCHL2Q9BQD1 86 aa13.42□□□□□ -0.26
SEC61A2-213ENST00000475268 NDUFAF3Q9BU61 184 aa13.42□□□□□ -0.26
SEC61A2-213ENST00000475268 F5H697 171 aa13.42□□□□□ -0.26
SEC61A2-213ENST00000475268 ZNF876PQ49A33 203 aa13.42□□□□□ -0.26
SEC61A2-213ENST00000475268 SMIM2Q9BVW6 85 aa13.42□□□□□ -0.26
SEC61A2-213ENST00000475268 INSP01308 110 aa13.41□□□□□ -0.26
SEC61A2-213ENST00000475268 PF4P02776 101 aa13.41□□□□□ -0.26
SEC61A2-213ENST00000475268 LAGE3Q14657 143 aa13.41□□□□□ -0.26
SEC61A2-213ENST00000475268 TMEM158Q8WZ71 300 aa13.41□□□□□ -0.26
SEC61A2-213ENST00000475268 C18orf15Q96N68 181 aa13.41□□□□□ -0.26
SEC61A2-213ENST00000475268 LINC01587Q99440 93 aa13.41□□□□□ -0.26
SEC61A2-213ENST00000475268 LINC01545Q5VT33 79 aa13.41□□□□□ -0.26
SEC61A2-213ENST00000475268 IFI27L1Q96BM0 104 aa13.41□□□□□ -0.26
SEC61A2-213ENST00000475268 CLUHP3Q96NS8 147 aa13.41□□□□□ -0.26
SEC61A2-213ENST00000475268 C20orf78Q9BR46 151 aa13.41□□□□□ -0.26
SEC61A2-213ENST00000475268 XCL2Q9UBD3 114 aa13.41□□□□□ -0.26
SEC61A2-213ENST00000475268 C2CD3Q4AC94 2353 aa13.4□□□□□ -0.26
SEC61A2-213ENST00000475268 SUMO4Q6EEV6 95 aa13.4□□□□□ -0.26
SEC61A2-213ENST00000475268 MIEN1Q9BRT3 115 aa13.4□□□□□ -0.26
SEC61A2-213ENST00000475268 PPP1R17O96001 155 aa13.39□□□□□ -0.27
SEC61A2-213ENST00000475268 TRPT1Q86TN4 253 aaKnown RBP13.39□□□□□ -0.27
SEC61A2-213ENST00000475268 IGLL1P15814 213 aa13.38□□□□□ -0.27
SEC61A2-213ENST00000475268 CRYGDP07320 174 aa13.38□□□□□ -0.27
SEC61A2-213ENST00000475268 CMC4P56277 68 aaPredicted RBP13.38□□□□□ -0.27
SEC61A2-213ENST00000475268 ZNF56Q15929 161 aa13.38□□□□□ -0.27
SEC61A2-213ENST00000475268 hDV102S1A0JD36 115 aa13.37□□□□□ -0.27
SEC61A2-213ENST00000475268 TMEM208Q9BTX3 173 aa13.37□□□□□ -0.27
SEC61A2-213ENST00000475268 NUDT3O95989 172 aa13.37□□□□□ -0.27
SEC61A2-213ENST00000475268 IGLC3P0DOY3 106 aa13.37□□□□□ -0.27
SEC61A2-213ENST00000475268 LINC00482Q8N8I6 264 aa13.37□□□□□ -0.27
SEC61A2-213ENST00000475268 WFDC10AQ9H1F0 79 aa13.37□□□□□ -0.27
SEC61A2-213ENST00000475268 NUTF2P61970 127 aaKnown RBP13.36□□□□□ -0.27
SEC61A2-213ENST00000475268 ZNF415Q09FC8 603 aa13.36□□□□□ -0.27
SEC61A2-213ENST00000475268 CSTL1Q9H114 145 aa13.36□□□□□ -0.27
SEC61A2-213ENST00000475268 ST20Q9HBF5 79 aa13.36□□□□□ -0.27
SEC61A2-213ENST00000475268 FLNBO75369 2602 aaKnown RBP13.36□□□□□ -0.27
SEC61A2-213ENST00000475268 IGHV3OR16-12A0A075B7B8 117 aa13.35□□□□□ -0.27
SEC61A2-213ENST00000475268 BEAN1Q3B7T3 259 aa13.35□□□□□ -0.27
SEC61A2-213ENST00000475268 NEGR1Q7Z3B1 354 aa13.35□□□□□ -0.27
SEC61A2-213ENST00000475268 LINC00467Q9BRT7 94 aa13.35□□□□□ -0.27
SEC61A2-213ENST00000475268 HSBP1L1C9JCN9 74 aa13.34□□□□□ -0.27
SEC61A2-213ENST00000475268 LGALS9BQ3B8N2 356 aa13.34□□□□□ -0.27
SEC61A2-213ENST00000475268 ORMDL2Q53FV1 153 aa13.34□□□□□ -0.27
SEC61A2-213ENST00000475268 LGALS9CQ6DKI2 356 aa13.34□□□□□ -0.27
SEC61A2-213ENST00000475268 UQCR10Q9UDW1 63 aa13.34□□□□□ -0.27
SEC61A2-213ENST00000475268 GOLT1BQ9Y3E0 138 aa13.34□□□□□ -0.27
SEC61A2-213ENST00000475268 M0R2P5 195 aa13.34□□□□□ -0.27
SEC61A2-213ENST00000475268 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.34□□□□□ -0.27
SEC61A2-213ENST00000475268 C1orf158Q8N1D5 194 aa13.33□□□□□ -0.28
SEC61A2-213ENST00000475268 C11orf72Q8NBR9 251 aa13.33□□□□□ -0.28
SEC61A2-213ENST00000475268 C19orf73Q9NVV2 129 aa13.33□□□□□ -0.28
SEC61A2-213ENST00000475268 JMJD1CQ15652 2540 aa13.33□□□□□ -0.28
SEC61A2-213ENST00000475268 M0QY20 66 aa13.32□□□□□ -0.28
SEC61A2-213ENST00000475268 PRSS1P07477 247 aa13.32□□□□□ -0.28
SEC61A2-213ENST00000475268 FAM110AQ9BQ89 295 aa13.32□□□□□ -0.28
SEC61A2-213ENST00000475268 K7EMI3 77 aa13.32□□□□□ -0.28
SEC61A2-213ENST00000475268 IGHV3-73A0A0B4J1V6 119 aa13.31□□□□□ -0.28
SEC61A2-213ENST00000475268 ATP5LO75964 103 aa13.31□□□□□ -0.28
SEC61A2-213ENST00000475268 RPL35AP18077 110 aaKnown RBP13.31□□□□□ -0.28
SEC61A2-213ENST00000475268 AZU1P20160 251 aa13.31□□□□□ -0.28
SEC61A2-213ENST00000475268 Q6ZN92 141 aa13.31□□□□□ -0.28
SEC61A2-213ENST00000475268 DEFB104AQ8WTQ1 72 aa13.31□□□□□ -0.28
SEC61A2-213ENST00000475268 SDHAF1A6NFY7 115 aa13.31□□□□□ -0.28
SEC61A2-213ENST00000475268 POLR2KP53803 58 aaKnown RBP13.31□□□□□ -0.28
SEC61A2-213ENST00000475268 RPL32P62910 135 aaKnown RBP13.3□□□□□ -0.28
SEC61A2-213ENST00000475268 CTAG1AP78358 180 aa13.3□□□□□ -0.28
SEC61A2-213ENST00000475268 DKK2Q9UBU2 259 aa13.3□□□□□ -0.28
SEC61A2-213ENST00000475268 VCYO14598 125 aa13.3□□□□□ -0.28
SEC61A2-213ENST00000475268 MORN3Q6PF18 240 aaPredicted RBP13.3□□□□□ -0.28
SEC61A2-213ENST00000475268 MRPL16Q9NX20 251 aaKnown RBP13.3□□□□□ -0.28
SEC61A2-213ENST00000475268 TRBV6-5A0A0K0K1A5 114 aa13.29□□□□□ -0.28
SEC61A2-213ENST00000475268 A8MWV9 139 aa13.29□□□□□ -0.28
SEC61A2-213ENST00000475268 SPXQ9BT56 116 aa13.29□□□□□ -0.28
SEC61A2-213ENST00000475268 GIG44P09565 113 aaPredicted RBP13.28□□□□□ -0.28
SEC61A2-213ENST00000475268 TOMM6Q96B49 74 aa13.28□□□□□ -0.28
SEC61A2-213ENST00000475268 KIR2DL4Q99706 377 aa13.28□□□□□ -0.28
SEC61A2-213ENST00000475268 TENM1Q9UKZ4 2725 aa13.28□□□□□ -0.28
SEC61A2-213ENST00000475268 HNRNPA3P51991 378 aaKnown RBP13.28□□□□□ -0.28
SEC61A2-213ENST00000475268 ODF1Q14990 250 aa13.28□□□□□ -0.28
SEC61A2-213ENST00000475268 PIK3CD-AS1Q5SR53 167 aa13.28□□□□□ -0.28
SEC61A2-213ENST00000475268 C2orf66Q6UXQ4 117 aa13.28□□□□□ -0.28
SEC61A2-213ENST00000475268 SPATA3Q8NHX4 192 aa13.28□□□□□ -0.28
SEC61A2-213ENST00000475268 SCGB3A1Q96QR1 104 aa13.28□□□□□ -0.28
SEC61A2-213ENST00000475268 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.27□□□□□ -0.28
SEC61A2-213ENST00000475268 EREGO14944 169 aa13.27□□□□□ -0.28
SEC61A2-213ENST00000475268 PTH2Q96A98 100 aa13.27□□□□□ -0.28
SEC61A2-213ENST00000475268 SNHG12Q9BXW3 62 aa13.27□□□□□ -0.28
SEC61A2-213ENST00000475268 F8P00451 2351 aa13.27□□□□□ -0.29
SEC61A2-213ENST00000475268 M0R143 59 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms