RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 SPCS1Q9Y6A9 102 aa15.61■□□□□ 0.09
SMIM11A-204ENST00000474455 U3KQE9 123 aa15.61■□□□□ 0.09
SMIM11A-204ENST00000474455 SORL1Q92673 2214 aa15.6■□□□□ 0.09
SMIM11A-204ENST00000474455 FHL3Q13643 280 aa15.6■□□□□ 0.09
SMIM11A-204ENST00000474455 HHLA3Q9XRX5 114 aa15.6■□□□□ 0.09
SMIM11A-204ENST00000474455 DPM2O94777 84 aa15.59■□□□□ 0.09
SMIM11A-204ENST00000474455 MRPL53Q96EL3 112 aaKnown RBP15.59■□□□□ 0.09
SMIM11A-204ENST00000474455 CITED1Q99966 193 aa15.59■□□□□ 0.09
SMIM11A-204ENST00000474455 DAZ1Q9NQZ3 744 aaKnown RBP15.59■□□□□ 0.09
SMIM11A-204ENST00000474455 PRSS1P07477 247 aa15.58■□□□□ 0.08
SMIM11A-204ENST00000474455 NDUFA11Q86Y39 141 aa15.58■□□□□ 0.08
SMIM11A-204ENST00000474455 C18orf15Q96N68 181 aa15.58■□□□□ 0.08
SMIM11A-204ENST00000474455 MSRB1Q9NZV6 116 aa15.58■□□□□ 0.08
SMIM11A-204ENST00000474455 CMYA5Q8N3K9 4069 aa15.57■□□□□ 0.08
SMIM11A-204ENST00000474455 IGHV7-4-1A0A0J9YVY3 117 aa15.57■□□□□ 0.08
SMIM11A-204ENST00000474455 SAMD5Q5TGI4 173 aa15.57■□□□□ 0.08
SMIM11A-204ENST00000474455 IGLV2-18A0A075B6J9 118 aa15.57■□□□□ 0.08
SMIM11A-204ENST00000474455 LGALS9O00182 355 aa15.57■□□□□ 0.08
SMIM11A-204ENST00000474455 SAP30O75446 220 aa15.57■□□□□ 0.08
SMIM11A-204ENST00000474455 TAL2Q16559 108 aa15.57■□□□□ 0.08
SMIM11A-204ENST00000474455 RAB37Q96AX2 223 aa15.57■□□□□ 0.08
SMIM11A-204ENST00000474455 CHAC1Q9BUX1 264 aa15.57■□□□□ 0.08
SMIM11A-204ENST00000474455 RHPN1-AS1Q9BWJ2 59 aa15.57■□□□□ 0.08
SMIM11A-204ENST00000474455 K7EMT4 169 aa15.56■□□□□ 0.08
SMIM11A-204ENST00000474455 HLA-DMBP28068 263 aa15.56■□□□□ 0.08
SMIM11A-204ENST00000474455 TM2D2Q9BX73 214 aa15.56■□□□□ 0.08
SMIM11A-204ENST00000474455 UFC1Q9Y3C8 167 aa15.56■□□□□ 0.08
SMIM11A-204ENST00000474455 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.55■□□□□ 0.08
SMIM11A-204ENST00000474455 WFDC3Q8IUB2 231 aa15.55■□□□□ 0.08
SMIM11A-204ENST00000474455 TMEM158Q8WZ71 300 aa15.55■□□□□ 0.08
SMIM11A-204ENST00000474455 GCSHP23434 173 aa15.54■□□□□ 0.08
SMIM11A-204ENST00000474455 SPATA3Q8NHX4 192 aa15.54■□□□□ 0.08
SMIM11A-204ENST00000474455 GLMPQ8WWB7 406 aa15.54■□□□□ 0.08
SMIM11A-204ENST00000474455 IGHV4-4A0A075B6R2 117 aa15.54■□□□□ 0.08
SMIM11A-204ENST00000474455 ERCC8Q13216 396 aa15.54■□□□□ 0.08
SMIM11A-204ENST00000474455 IGFL4Q6B9Z1 124 aa15.54■□□□□ 0.08
SMIM11A-204ENST00000474455 IGKV3-7A0A075B6H7 116 aa15.53■□□□□ 0.08
SMIM11A-204ENST00000474455 IGKV2D-26A0A0A0MRZ7 120 aa15.53■□□□□ 0.08
SMIM11A-204ENST00000474455 TCTAP57738 103 aa15.53■□□□□ 0.08
SMIM11A-204ENST00000474455 PRAC2D3DTV9 90 aa15.52■□□□□ 0.08
SMIM11A-204ENST00000474455 LAGE3Q14657 143 aa15.52■□□□□ 0.08
SMIM11A-204ENST00000474455 NOTCH3Q9UM47 2321 aa15.52■□□□□ 0.08
SMIM11A-204ENST00000474455 TRBV25-1A0A075B6N4 114 aa15.52■□□□□ 0.07
SMIM11A-204ENST00000474455 CEND1Q8N111 149 aa15.52■□□□□ 0.07
SMIM11A-204ENST00000474455 NAA38Q9BRA0 125 aaKnown RBP15.52■□□□□ 0.07
SMIM11A-204ENST00000474455 IGKV3D-20A0A0C4DH25 116 aa15.51■□□□□ 0.07
SMIM11A-204ENST00000474455 GAS8-AS1O95177 125 aa15.51■□□□□ 0.07
SMIM11A-204ENST00000474455 FXYD2P54710 66 aa15.51■□□□□ 0.07
SMIM11A-204ENST00000474455 PHLDA1Q8WV24 401 aaPredicted RBP15.51■□□□□ 0.07
SMIM11A-204ENST00000474455 TMEM78Q5T7P6 136 aa15.5■□□□□ 0.07
SMIM11A-204ENST00000474455 ZC2HC1BQ5TFG8 222 aa15.5■□□□□ 0.07
SMIM11A-204ENST00000474455 NRACQ8N912 160 aa15.5■□□□□ 0.07
SMIM11A-204ENST00000474455 AGPAT4-IT1Q9H0P7 198 aa15.5■□□□□ 0.07
SMIM11A-204ENST00000474455 A0A087WX48 190 aa15.5■□□□□ 0.07
SMIM11A-204ENST00000474455 OVOL1O14753 267 aa15.5■□□□□ 0.07
SMIM11A-204ENST00000474455 PLNP26678 52 aa15.5■□□□□ 0.07
SMIM11A-204ENST00000474455 C9orf47Q6ZRZ4 202 aa15.5■□□□□ 0.07
SMIM11A-204ENST00000474455 MRAP2Q96G30 205 aa15.5■□□□□ 0.07
SMIM11A-204ENST00000474455 RPL11P62913 178 aaKnown RBP15.49■□□□□ 0.07
SMIM11A-204ENST00000474455 GTSCR1Q86UQ5 136 aa15.49■□□□□ 0.07
SMIM11A-204ENST00000474455 PEMTQ9UBM1 199 aa15.49■□□□□ 0.07
SMIM11A-204ENST00000474455 TRAV12-1A0A0B4J245 112 aa15.48■□□□□ 0.07
SMIM11A-204ENST00000474455 PF4P02776 101 aa15.48■□□□□ 0.07
SMIM11A-204ENST00000474455 GATA1P15976 413 aaPredicted RBP15.48■□□□□ 0.07
SMIM11A-204ENST00000474455 C3orf56Q8N813 242 aa15.48■□□□□ 0.07
SMIM11A-204ENST00000474455 LENEPQ9Y5L5 61 aa15.48■□□□□ 0.07
SMIM11A-204ENST00000474455 ANK2Q01484 3957 aa15.47■□□□□ 0.07
SMIM11A-204ENST00000474455 E9PLD3 99 aa15.47■□□□□ 0.07
SMIM11A-204ENST00000474455 RIPPLY3P57055 190 aa15.47■□□□□ 0.07
SMIM11A-204ENST00000474455 K7EMI3 77 aa15.46■□□□□ 0.07
SMIM11A-204ENST00000474455 RNF182Q8N6D2 247 aa15.46■□□□□ 0.07
SMIM11A-204ENST00000474455 LINC00482Q8N8I6 264 aa15.46■□□□□ 0.07
SMIM11A-204ENST00000474455 MRPL35Q9NZE8 188 aaKnown RBP15.46■□□□□ 0.07
SMIM11A-204ENST00000474455 C11orf21Q9P2W6 132 aa15.46■□□□□ 0.07
SMIM11A-204ENST00000474455 TRAV8-2A0A0B4J237 113 aa15.46■□□□□ 0.06
SMIM11A-204ENST00000474455 MDFIQ99750 246 aa15.46■□□□□ 0.06
SMIM11A-204ENST00000474455 AGRNO00468 2067 aa15.45■□□□□ 0.06
SMIM11A-204ENST00000474455 F8W1H4 67 aa15.44■□□□□ 0.06
SMIM11A-204ENST00000474455 H7C1H1 209 aa15.44■□□□□ 0.06
SMIM11A-204ENST00000474455 TMEM238C9JI98 176 aa15.44■□□□□ 0.06
SMIM11A-204ENST00000474455 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.44■□□□□ 0.06
SMIM11A-204ENST00000474455 ORMDL2Q53FV1 153 aa15.44■□□□□ 0.06
SMIM11A-204ENST00000474455 SPANXN1Q5VSR9 72 aa15.44■□□□□ 0.06
SMIM11A-204ENST00000474455 NHP2Q9NX24 153 aaKnown RBP15.44■□□□□ 0.06
SMIM11A-204ENST00000474455 IGLL5B9A064 214 aa15.43■□□□□ 0.06
SMIM11A-204ENST00000474455 DEFB114Q30KQ6 69 aa15.43■□□□□ 0.06
SMIM11A-204ENST00000474455 CD300EQ496F6 205 aaPredicted RBP15.42■□□□□ 0.06
SMIM11A-204ENST00000474455 SMIM2Q9BVW6 85 aa15.42■□□□□ 0.06
SMIM11A-204ENST00000474455 TTTY13Q9BZ97 58 aa15.42■□□□□ 0.06
SMIM11A-204ENST00000474455 F8VRH5 84 aa15.42■□□□□ 0.06
SMIM11A-204ENST00000474455 SOCS3O14543 225 aa15.42■□□□□ 0.06
SMIM11A-204ENST00000474455 FOXI2Q6ZQN5 318 aa15.42■□□□□ 0.06
SMIM11A-204ENST00000474455 TMEM61Q8N0U2 210 aa15.42■□□□□ 0.06
SMIM11A-204ENST00000474455 C20orf78Q9BR46 151 aa15.42■□□□□ 0.06
SMIM11A-204ENST00000474455 MAPKAPK5-AS1Q8N8E1 139 aa15.41■□□□□ 0.06
SMIM11A-204ENST00000474455 DYNLRB2Q8TF09 96 aa15.41■□□□□ 0.06
SMIM11A-204ENST00000474455 DCANP1Q8TF63 244 aa15.41■□□□□ 0.06
SMIM11A-204ENST00000474455 C20orf173Q96LM9 149 aa15.41■□□□□ 0.06
SMIM11A-204ENST00000474455 PKD1L1Q8TDX9 2849 aa15.4■□□□□ 0.06
SMIM11A-204ENST00000474455 J3QR89 54 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms