RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 CIDEAO60543 219 aa7.4□□□□□ -1.22
PRPF38A-202ENST00000474048 DEFB130BP0DP73 79 aa7.4□□□□□ -1.22
PRPF38A-202ENST00000474048 DEFB130AP0DP74 79 aa7.4□□□□□ -1.22
PRPF38A-202ENST00000474048 DAD1P61803 113 aa7.4□□□□□ -1.22
PRPF38A-202ENST00000474048 GATD1Q8NB37 220 aa7.4□□□□□ -1.22
PRPF38A-202ENST00000474048 RASL10AQ92737 203 aa7.4□□□□□ -1.22
PRPF38A-202ENST00000474048 MRAP2Q96G30 205 aa7.4□□□□□ -1.22
PRPF38A-202ENST00000474048 OVOL2Q9BRP0 275 aa7.4□□□□□ -1.22
PRPF38A-202ENST00000474048 RETNQ9HD89 108 aa7.4□□□□□ -1.22
PRPF38A-202ENST00000474048 TRAV4A0A0B4J268 109 aa7.39□□□□□ -1.23
PRPF38A-202ENST00000474048 TRGV4A0A0C4DH28 118 aa7.39□□□□□ -1.23
PRPF38A-202ENST00000474048 D6R8Y8 96 aa7.39□□□□□ -1.23
PRPF38A-202ENST00000474048 SRIP30626 198 aa7.39□□□□□ -1.23
PRPF38A-202ENST00000474048 SLAQ13239 276 aa7.39□□□□□ -1.23
PRPF38A-202ENST00000474048 KIAA1644Q3SXP7 199 aa7.39□□□□□ -1.23
PRPF38A-202ENST00000474048 FAM222AQ5U5X8 452 aa7.39□□□□□ -1.23
PRPF38A-202ENST00000474048 Q6ZTI0 123 aa7.39□□□□□ -1.23
PRPF38A-202ENST00000474048 SBSPONQ8IVN8 264 aa7.39□□□□□ -1.23
PRPF38A-202ENST00000474048 IL17DQ8TAD2 202 aa7.39□□□□□ -1.23
PRPF38A-202ENST00000474048 PRELID3AQ96N28 172 aa7.39□□□□□ -1.23
PRPF38A-202ENST00000474048 DEFB4AO15263 64 aa7.38□□□□□ -1.23
PRPF38A-202ENST00000474048 RAB4AP20338 218 aa7.38□□□□□ -1.23
PRPF38A-202ENST00000474048 MRPL51Q4U2R6 128 aaKnown RBP7.38□□□□□ -1.23
PRPF38A-202ENST00000474048 ZNF575Q86XF7 245 aa7.38□□□□□ -1.23
PRPF38A-202ENST00000474048 BAGE3Q86Y29 109 aa7.38□□□□□ -1.23
PRPF38A-202ENST00000474048 Q8NAQ8 132 aa7.38□□□□□ -1.23
PRPF38A-202ENST00000474048 LAMTOR2Q9Y2Q5 125 aa7.38□□□□□ -1.23
PRPF38A-202ENST00000474048 IGHV3-73A0A0B4J1V6 119 aa7.37□□□□□ -1.23
PRPF38A-202ENST00000474048 RS1O15537 224 aa7.37□□□□□ -1.23
PRPF38A-202ENST00000474048 NCR2O95944 276 aa7.37□□□□□ -1.23
PRPF38A-202ENST00000474048 IGHV3-53P01767 116 aa7.37□□□□□ -1.23
PRPF38A-202ENST00000474048 DEFA6Q01524 100 aa7.37□□□□□ -1.23
PRPF38A-202ENST00000474048 OR10J3Q5JRS4 329 aa7.37□□□□□ -1.23
PRPF38A-202ENST00000474048 CFAP126Q5VTH2 177 aa7.37□□□□□ -1.23
PRPF38A-202ENST00000474048 ZFP2Q6ZN57 461 aa7.37□□□□□ -1.23
PRPF38A-202ENST00000474048 B9D2Q9BPU9 175 aa7.37□□□□□ -1.23
PRPF38A-202ENST00000474048 C11orf68Q9H3H3 251 aaKnown RBP7.37□□□□□ -1.23
PRPF38A-202ENST00000474048 MAP1LC3AQ9H492 121 aa7.37□□□□□ -1.23
PRPF38A-202ENST00000474048 JPT2Q9H910 190 aa7.37□□□□□ -1.23
PRPF38A-202ENST00000474048 MUC4Q99102 2169 aa7.37□□□□□ -1.23
PRPF38A-202ENST00000474048 ATP5G1P05496 136 aa7.36□□□□□ -1.23
PRPF38A-202ENST00000474048 TM2D3Q9BRN9 247 aa7.36□□□□□ -1.23
PRPF38A-202ENST00000474048 DKK2Q9UBU2 259 aa7.36□□□□□ -1.23
PRPF38A-202ENST00000474048 TRRAPQ9Y4A5 3859 aa7.36□□□□□ -1.23
PRPF38A-202ENST00000474048 TRAV26-2A0A0B4J265 109 aa7.35□□□□□ -1.23
PRPF38A-202ENST00000474048 PLAC8L1A1L4L8 177 aa7.35□□□□□ -1.23
PRPF38A-202ENST00000474048 SMKR1H3BMG3 65 aa7.35□□□□□ -1.23
PRPF38A-202ENST00000474048 PHOX2AO14813 284 aa7.35□□□□□ -1.23
PRPF38A-202ENST00000474048 NHLRC4P0CG21 123 aaPredicted RBP7.35□□□□□ -1.23
PRPF38A-202ENST00000474048 PMCHP20382 165 aa7.35□□□□□ -1.23
PRPF38A-202ENST00000474048 SUMO4Q6EEV6 95 aa7.35□□□□□ -1.23
PRPF38A-202ENST00000474048 FA2HQ7L5A8 372 aa7.35□□□□□ -1.23
PRPF38A-202ENST00000474048 PRSS3P2Q8NHM4 247 aa7.35□□□□□ -1.23
PRPF38A-202ENST00000474048 RNF185Q96GF1 192 aa7.35□□□□□ -1.23
PRPF38A-202ENST00000474048 PRADC1Q9BSG0 188 aa7.35□□□□□ -1.23
PRPF38A-202ENST00000474048 SAMD10Q9BYL1 202 aa7.35□□□□□ -1.23
PRPF38A-202ENST00000474048 ST20Q9HBF5 79 aa7.35□□□□□ -1.23
PRPF38A-202ENST00000474048 TNFRSF18Q9Y5U5 241 aa7.35□□□□□ -1.23
PRPF38A-202ENST00000474048 ANK2Q01484 3957 aa7.35□□□□□ -1.23
PRPF38A-202ENST00000474048 A0A0J9YWU9 116 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 K7EQD1 137 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 HIST1H2BKO60814 126 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 TNFRSF6BO95407 300 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 HIST1H2BJP06899 126 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 CRYGDP07320 174 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 HTN3P15516 51 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 HIST1H2BOP23527 126 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 HIST1H2BBP33778 126 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 NDUFA6P56556 154 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 HIST1H2BDP58876 126 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 HIST1H2BCP62807 126 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 RHOHQ15669 191 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 HIST2H2BEQ16778 126 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 C11orf45Q8TAV5 145 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 HIST1H2BHQ93079 126 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 HIST1H2BNQ99877 126 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 HIST1H2BMQ99879 126 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 ALKBH7Q9BT30 221 aaPredicted RBP7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 PKD1L1Q8TDX9 2849 aa7.34□□□□□ -1.23
PRPF38A-202ENST00000474048 LOC389332A0A1B0GUA5 103 aa7.33□□□□□ -1.24
PRPF38A-202ENST00000474048 S100A2P29034 98 aa7.33□□□□□ -1.24
PRPF38A-202ENST00000474048 RPL36AP83881 106 aaKnown RBP7.33□□□□□ -1.24
PRPF38A-202ENST00000474048 RNASEKQ6P5S7 137 aaKnown RBP7.33□□□□□ -1.24
PRPF38A-202ENST00000474048 RPL36ALQ969Q0 106 aaKnown RBP7.33□□□□□ -1.24
PRPF38A-202ENST00000474048 ZNF479Q96JC4 524 aa7.33□□□□□ -1.24
PRPF38A-202ENST00000474048 C18orf15Q96N68 181 aa7.33□□□□□ -1.24
PRPF38A-202ENST00000474048 NXT2Q9NPJ8 142 aaKnown RBP7.33□□□□□ -1.24
PRPF38A-202ENST00000474048 NIT2Q9NQR4 276 aa7.33□□□□□ -1.24
PRPF38A-202ENST00000474048 KIF25-AS1Q9Y6Z4 181 aa7.33□□□□□ -1.24
PRPF38A-202ENST00000474048 MGAM2Q2M2H8 2515 aa7.33□□□□□ -1.24
PRPF38A-202ENST00000474048 TRBV10-1A0A0K0K1A3 114 aa7.32□□□□□ -1.24
PRPF38A-202ENST00000474048 F5H768 121 aa7.32□□□□□ -1.24
PRPF38A-202ENST00000474048 HSBP1O75506 76 aa7.32□□□□□ -1.24
PRPF38A-202ENST00000474048 NPYP01303 97 aa7.32□□□□□ -1.24
PRPF38A-202ENST00000474048 FCER1GP30273 86 aa7.32□□□□□ -1.24
PRPF38A-202ENST00000474048 SUMO2P61956 95 aaKnown RBP7.32□□□□□ -1.24
PRPF38A-202ENST00000474048 C18orf32Q8TCD1 76 aa7.32□□□□□ -1.24
PRPF38A-202ENST00000474048 DNAJC30Q96LL9 226 aa7.32□□□□□ -1.24
PRPF38A-202ENST00000474048 KIR2DL4Q99706 377 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms