RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 IGHV3OR16-13A0A075B7E8 117 aa4.63□□□□□ -1.67
HERC4-209ENST00000473533 IGHV3-74A0A0B4J1X5 117 aa4.63□□□□□ -1.67
HERC4-209ENST00000473533 IGIPA6NJ69 53 aa4.63□□□□□ -1.67
HERC4-209ENST00000473533 F5H697 171 aa4.63□□□□□ -1.67
HERC4-209ENST00000473533 ZNF876PQ49A33 203 aa4.63□□□□□ -1.67
HERC4-209ENST00000473533 C19orf54Q5BKX5 351 aa4.63□□□□□ -1.67
HERC4-209ENST00000473533 GPHB5Q86YW7 130 aa4.63□□□□□ -1.67
HERC4-209ENST00000473533 DAZ1Q9NQZ3 744 aaKnown RBP4.63□□□□□ -1.67
HERC4-209ENST00000473533 ZNF580Q9UK33 172 aa4.63□□□□□ -1.67
HERC4-209ENST00000473533 IGHV3-30P01768 117 aa4.63□□□□□ -1.67
HERC4-209ENST00000473533 COX6CP09669 75 aa4.63□□□□□ -1.67
HERC4-209ENST00000473533 IGHV3-30-5P0DP03 117 aa4.63□□□□□ -1.67
HERC4-209ENST00000473533 ZFP36P26651 326 aaKnown RBP4.63□□□□□ -1.67
HERC4-209ENST00000473533 PRR30Q53SZ7 412 aaPredicted RBP4.63□□□□□ -1.67
HERC4-209ENST00000473533 MDFICQ9P1T7 246 aa4.63□□□□□ -1.67
HERC4-209ENST00000473533 TLN2Q9Y4G6 2542 aa4.62□□□□□ -1.67
HERC4-209ENST00000473533 IGHV3-49A0A0A0MS15 119 aa4.62□□□□□ -1.67
HERC4-209ENST00000473533 KLLNB2CW77 178 aa4.62□□□□□ -1.67
HERC4-209ENST00000473533 DUSP14O95147 198 aaKnown RBP4.62□□□□□ -1.67
HERC4-209ENST00000473533 PRR9Q5T870 116 aa4.62□□□□□ -1.67
HERC4-209ENST00000473533 ZFAND6Q6FIF0 208 aa4.62□□□□□ -1.67
HERC4-209ENST00000473533 Q6ZUT4 128 aa4.62□□□□□ -1.67
HERC4-209ENST00000473533 IGLV4-69A0A075B6H9 119 aa4.62□□□□□ -1.67
HERC4-209ENST00000473533 RNASE3P12724 160 aaKnown RBP4.62□□□□□ -1.67
HERC4-209ENST00000473533 SUMO4Q6EEV6 95 aa4.62□□□□□ -1.67
HERC4-209ENST00000473533 TEX29Q8N6K0 151 aa4.62□□□□□ -1.67
HERC4-209ENST00000473533 COPS9Q8WXC6 57 aa4.62□□□□□ -1.67
HERC4-209ENST00000473533 C20orf173Q96LM9 149 aa4.62□□□□□ -1.67
HERC4-209ENST00000473533 YAE1D1Q9NRH1 226 aa4.62□□□□□ -1.67
HERC4-209ENST00000473533 TRGV11A0A075B6L2 103 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 M0R2P5 195 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 LY6HO94772 140 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 SNRPD3P62318 126 aaKnown RBP4.61□□□□□ -1.67
HERC4-209ENST00000473533 MRPL23Q16540 153 aaKnown RBP4.61□□□□□ -1.67
HERC4-209ENST00000473533 LINC01600Q96MT4 127 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 KIF25-AS1Q9Y6Z4 181 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 CACNA1AO00555 2505 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 CSPG4Q6UVK1 2322 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 TMEM89A2RUT3 159 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 J3KRW8 73 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 SLC25A20O43772 301 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 CFC1BP0CG36 223 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 CFC1P0CG37 223 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 NBL1P41271 181 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 RHPN1-AS1Q9BWJ2 59 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 RNF223E7ERA6 249 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 I3L3M4 83 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 SNCGO76070 127 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 TCL1BO95988 128 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 IGHG2P01859 326 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 Q1RN00 199 aa4.61□□□□□ -1.67
HERC4-209ENST00000473533 WNK1Q9H4A3 2382 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 CRYGDP07320 174 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 ADORA2A-AS1P86434 159 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 Q6Q795 121 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 RNF183Q96D59 192 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 AJUBAQ96IF1 538 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 CDIP1Q9H305 208 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 TMEM223A0PJW6 202 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 PF4V1P10720 104 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 LMO4P61968 165 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 ZNF56Q15929 161 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 EDA2RQ9HAV5 297 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 PYGO1Q9Y3Y4 419 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 GNRH2O43555 120 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 GRNP28799 593 aaKnown RBP4.6□□□□□ -1.67
HERC4-209ENST00000473533 SMCPP49901 116 aaPredicted RBP4.6□□□□□ -1.67
HERC4-209ENST00000473533 LINC00315P59091 139 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 C9orf85Q96MD7 179 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 ANAPC13Q9BS18 74 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 PIMREGQ9BSJ6 248 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 UBTD1Q9HAC8 227 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 CELSR1Q9NYQ6 3014 aa4.6□□□□□ -1.67
HERC4-209ENST00000473533 TRBV30A0A0K0K1B3 111 aa4.59□□□□□ -1.67
HERC4-209ENST00000473533 PIK3CD-AS1Q5SR53 167 aa4.59□□□□□ -1.67
HERC4-209ENST00000473533 ANKRD29Q8N6D5 301 aa4.59□□□□□ -1.67
HERC4-209ENST00000473533 KLHL30-AS1Q8NEE0 82 aa4.59□□□□□ -1.67
HERC4-209ENST00000473533 H3BT86 120 aa4.59□□□□□ -1.67
HERC4-209ENST00000473533 RHODO00212 210 aa4.59□□□□□ -1.67
HERC4-209ENST00000473533 IGHV3-33P01772 117 aa4.59□□□□□ -1.67
HERC4-209ENST00000473533 FOXC1Q12948 553 aa4.59□□□□□ -1.67
HERC4-209ENST00000473533 C20orf203Q8NBC4 194 aa4.59□□□□□ -1.67
HERC4-209ENST00000473533 AGRNO00468 2067 aa4.59□□□□□ -1.68
HERC4-209ENST00000473533 IGHV1OR15-1A0A075B7D0 117 aa4.59□□□□□ -1.68
HERC4-209ENST00000473533 C9JAW5 83 aa4.59□□□□□ -1.68
HERC4-209ENST00000473533 TSHBP01222 138 aa4.59□□□□□ -1.68
HERC4-209ENST00000473533 IFITM1P13164 125 aa4.59□□□□□ -1.68
HERC4-209ENST00000473533 RPL13AP40429 203 aaKnown RBP4.59□□□□□ -1.68
HERC4-209ENST00000473533 GAGE2BQ13066 116 aa4.59□□□□□ -1.68
HERC4-209ENST00000473533 GAGE2EQ4V326 116 aa4.59□□□□□ -1.68
HERC4-209ENST00000473533 GAGE2DQ9UEU5 116 aa4.59□□□□□ -1.68
HERC4-209ENST00000473533 ZNF256Q9Y2P7 627 aaPredicted RBP4.59□□□□□ -1.68
HERC4-209ENST00000473533 OTOGLQ3ZCN5 2332 aa4.58□□□□□ -1.68
HERC4-209ENST00000473533 TRBV10-2A0A0K0K1G8 114 aa4.58□□□□□ -1.68
HERC4-209ENST00000473533 A4D1N5 150 aa4.58□□□□□ -1.68
HERC4-209ENST00000473533 INSL3P51460 131 aa4.58□□□□□ -1.68
HERC4-209ENST00000473533 UNQ9165/PRO28630Q6UXU0 137 aa4.58□□□□□ -1.68
HERC4-209ENST00000473533 BPESC1Q9GZL8 116 aa4.58□□□□□ -1.68
HERC4-209ENST00000473533 MYO9AB2RTY4 2548 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms