RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 FAM74A4Q5TZK3 123 aa11.96□□□□□ -0.49
CCM2-205ENST00000472223 CFAP126Q5VTH2 177 aa11.96□□□□□ -0.49
CCM2-205ENST00000472223 ZFP2Q6ZN57 461 aa11.96□□□□□ -0.49
CCM2-205ENST00000472223 TRAV9-1A0A075B6T8 112 aa11.95□□□□□ -0.5
CCM2-205ENST00000472223 ATP5L2Q7Z4Y8 100 aa11.95□□□□□ -0.5
CCM2-205ENST00000472223 A0A087WWL8 130 aa11.94□□□□□ -0.5
CCM2-205ENST00000472223 F5H697 171 aa11.94□□□□□ -0.5
CCM2-205ENST00000472223 C14orf178Q8N769 122 aaPredicted RBP11.94□□□□□ -0.5
CCM2-205ENST00000472223 PHLDA1Q8WV24 401 aaPredicted RBP11.94□□□□□ -0.5
CCM2-205ENST00000472223 ZNF479Q96JC4 524 aa11.94□□□□□ -0.5
CCM2-205ENST00000472223 DPH3P1Q9H4G8 78 aa11.94□□□□□ -0.5
CCM2-205ENST00000472223 MSRB1Q9NZV6 116 aa11.94□□□□□ -0.5
CCM2-205ENST00000472223 IGHV3-73A0A0B4J1V6 119 aa11.93□□□□□ -0.5
CCM2-205ENST00000472223 NUPR2A6NF83 97 aa11.93□□□□□ -0.5
CCM2-205ENST00000472223 CAMPP49913 170 aa11.93□□□□□ -0.5
CCM2-205ENST00000472223 HBBP68871 147 aa11.93□□□□□ -0.5
CCM2-205ENST00000472223 ZNF56Q15929 161 aa11.93□□□□□ -0.5
CCM2-205ENST00000472223 MRPL54Q6P161 138 aaKnown RBP11.93□□□□□ -0.5
CCM2-205ENST00000472223 JPT2Q9H910 190 aa11.93□□□□□ -0.5
CCM2-205ENST00000472223 KLK5Q9Y337 293 aaPredicted RBP11.93□□□□□ -0.5
CCM2-205ENST00000472223 URGCP-MRPS24S4R325 110 aa11.93□□□□□ -0.5
CCM2-205ENST00000472223 TGP01266 2768 aa11.92□□□□□ -0.5
CCM2-205ENST00000472223 MGPP08493 103 aa11.92□□□□□ -0.5
CCM2-205ENST00000472223 SMCO4Q9NRQ5 59 aa11.92□□□□□ -0.5
CCM2-205ENST00000472223 PRO0255Q9UI72 69 aa11.92□□□□□ -0.5
CCM2-205ENST00000472223 HHLA3Q9XRX5 114 aa11.92□□□□□ -0.5
CCM2-205ENST00000472223 ATP6V1G1O75348 118 aa11.91□□□□□ -0.5
CCM2-205ENST00000472223 EVI2AP22794 236 aa11.91□□□□□ -0.5
CCM2-205ENST00000472223 RAB4BP61018 213 aa11.91□□□□□ -0.5
CCM2-205ENST00000472223 POM121L12Q8N7R1 296 aa11.91□□□□□ -0.5
CCM2-205ENST00000472223 MUC7Q8TAX7 377 aa11.91□□□□□ -0.5
CCM2-205ENST00000472223 FAM210BQ96KR6 192 aa11.91□□□□□ -0.5
CCM2-205ENST00000472223 PRADC1Q9BSG0 188 aa11.91□□□□□ -0.5
CCM2-205ENST00000472223 SAMD10Q9BYL1 202 aa11.91□□□□□ -0.5
CCM2-205ENST00000472223 STAB2Q8WWQ8 2551 aa11.91□□□□□ -0.5
CCM2-205ENST00000472223 H7C1H1 209 aa11.9□□□□□ -0.5
CCM2-205ENST00000472223 PAX4O43316 350 aa11.9□□□□□ -0.5
CCM2-205ENST00000472223 CRYGDP07320 174 aa11.9□□□□□ -0.5
CCM2-205ENST00000472223 FHL2Q14192 279 aa11.9□□□□□ -0.5
CCM2-205ENST00000472223 RASL11AQ6T310 242 aa11.9□□□□□ -0.5
CCM2-205ENST00000472223 TMEM191AQ9H0A3 160 aa11.9□□□□□ -0.5
CCM2-205ENST00000472223 COX19Q49B96 90 aa11.89□□□□□ -0.51
CCM2-205ENST00000472223 CEMP1Q6PRD7 247 aaPredicted RBP11.89□□□□□ -0.51
CCM2-205ENST00000472223 TRBV6-4A0A1B0GX49 114 aa11.88□□□□□ -0.51
CCM2-205ENST00000472223 IGLL5B9A064 214 aa11.88□□□□□ -0.51
CCM2-205ENST00000472223 HOXA5P20719 270 aa11.88□□□□□ -0.51
CCM2-205ENST00000472223 RHOHQ15669 191 aa11.88□□□□□ -0.51
CCM2-205ENST00000472223 ATRAIDQ6UW56 229 aa11.88□□□□□ -0.51
CCM2-205ENST00000472223 TRAV26-1A0A087WT03 109 aa11.87□□□□□ -0.51
CCM2-205ENST00000472223 A0A0J9YY99 117 aa11.87□□□□□ -0.51
CCM2-205ENST00000472223 GATA1P15976 413 aaPredicted RBP11.87□□□□□ -0.51
CCM2-205ENST00000472223 CRYBA4P53673 196 aa11.87□□□□□ -0.51
CCM2-205ENST00000472223 FRZBQ92765 325 aa11.87□□□□□ -0.51
CCM2-205ENST00000472223 A0A1B0GXF2 115 aa11.86□□□□□ -0.51
CCM2-205ENST00000472223 H3BNG1 76 aa11.86□□□□□ -0.51
CCM2-205ENST00000472223 C3orf84H3BNL1 204 aa11.86□□□□□ -0.51
CCM2-205ENST00000472223 UFSP1Q6NVU6 142 aa11.86□□□□□ -0.51
CCM2-205ENST00000472223 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.86□□□□□ -0.51
CCM2-205ENST00000472223 KIF25-AS1Q9Y6Z4 181 aa11.86□□□□□ -0.51
CCM2-205ENST00000472223 NACAE9PAV3 2078 aa11.85□□□□□ -0.51
CCM2-205ENST00000472223 K7EQD1 137 aa11.85□□□□□ -0.51
CCM2-205ENST00000472223 TCTAP57738 103 aa11.85□□□□□ -0.51
CCM2-205ENST00000472223 ZFAND6Q6FIF0 208 aa11.85□□□□□ -0.51
CCM2-205ENST00000472223 TMEM88Q6PEY1 159 aa11.85□□□□□ -0.51
CCM2-205ENST00000472223 SLC25A29Q8N8R3 303 aa11.85□□□□□ -0.51
CCM2-205ENST00000472223 C15orf53Q8NAA6 179 aa11.85□□□□□ -0.51
CCM2-205ENST00000472223 TRBV10-1A0A0K0K1A3 114 aa11.84□□□□□ -0.51
CCM2-205ENST00000472223 ELOBQ15370 118 aa11.84□□□□□ -0.51
CCM2-205ENST00000472223 MRAP2Q96G30 205 aa11.84□□□□□ -0.51
CCM2-205ENST00000472223 ICOSQ9Y6W8 199 aa11.84□□□□□ -0.51
CCM2-205ENST00000472223 TRBV24-1A0A075B6N3 115 aa11.83□□□□□ -0.52
CCM2-205ENST00000472223 NUDT3O95989 172 aa11.83□□□□□ -0.52
CCM2-205ENST00000472223 PPP1R17O96001 155 aa11.83□□□□□ -0.52
CCM2-205ENST00000472223 RAB4AP20338 218 aa11.83□□□□□ -0.52
CCM2-205ENST00000472223 RPL36AP83881 106 aaKnown RBP11.83□□□□□ -0.52
CCM2-205ENST00000472223 MRPL23Q16540 153 aaKnown RBP11.83□□□□□ -0.52
CCM2-205ENST00000472223 FAM104BQ5XKR9 115 aa11.83□□□□□ -0.52
CCM2-205ENST00000472223 SUMO4Q6EEV6 95 aa11.83□□□□□ -0.52
CCM2-205ENST00000472223 SH2D6Q7Z4S9 175 aa11.83□□□□□ -0.52
CCM2-205ENST00000472223 CBLN2Q8IUK8 224 aa11.83□□□□□ -0.52
CCM2-205ENST00000472223 AMN1Q8IY45 258 aa11.83□□□□□ -0.52
CCM2-205ENST00000472223 RPL36ALQ969Q0 106 aaKnown RBP11.83□□□□□ -0.52
CCM2-205ENST00000472223 TNFRSF18Q9Y5U5 241 aa11.83□□□□□ -0.52
CCM2-205ENST00000472223 TGIF2-C20orf24A0A0A6YYL0 155 aa11.82□□□□□ -0.52
CCM2-205ENST00000472223 HLA-DQA1P01909 254 aa11.82□□□□□ -0.52
CCM2-205ENST00000472223 MT-ND6P03923 174 aa11.82□□□□□ -0.52
CCM2-205ENST00000472223 GYPEP15421 78 aa11.82□□□□□ -0.52
CCM2-205ENST00000472223 SRIP30626 198 aa11.82□□□□□ -0.52
CCM2-205ENST00000472223 LINC00315P59091 139 aa11.82□□□□□ -0.52
CCM2-205ENST00000472223 GATD1Q8NB37 220 aa11.82□□□□□ -0.52
CCM2-205ENST00000472223 DNAJC30Q96LL9 226 aa11.82□□□□□ -0.52
CCM2-205ENST00000472223 GNB1LQ9BYB4 327 aa11.82□□□□□ -0.52
CCM2-205ENST00000472223 CKS2P33552 79 aa11.81□□□□□ -0.52
CCM2-205ENST00000472223 Q6ZSN1 163 aa11.81□□□□□ -0.52
CCM2-205ENST00000472223 VSIG2Q96IQ7 327 aa11.81□□□□□ -0.52
CCM2-205ENST00000472223 APCSP02743 223 aa11.8□□□□□ -0.52
CCM2-205ENST00000472223 PPBPP02775 128 aa11.8□□□□□ -0.52
CCM2-205ENST00000472223 NIT2Q9NQR4 276 aa11.8□□□□□ -0.52
CCM2-205ENST00000472223 TRBV7-3A0A075B6L6 115 aa11.79□□□□□ -0.52
CCM2-205ENST00000472223 GAGE12JA6NER3 117 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms