RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 SCGB1A1P11684 91 aa13.04□□□□□ -0.32
RRP1-202ENST00000471909 PLNP26678 52 aa13.04□□□□□ -0.32
RRP1-202ENST00000471909 NRACQ8N912 160 aa13.04□□□□□ -0.32
RRP1-202ENST00000471909 TSSC4Q9Y5U2 329 aaPredicted RBP13.04□□□□□ -0.32
RRP1-202ENST00000471909 TRAV26-2A0A0B4J265 109 aa13.03□□□□□ -0.32
RRP1-202ENST00000471909 IGHV4OR15-8A0A075B7B6 117 aa13.03□□□□□ -0.32
RRP1-202ENST00000471909 A0A087WW49 117 aa13.03□□□□□ -0.32
RRP1-202ENST00000471909 CD300EQ496F6 205 aaPredicted RBP13.03□□□□□ -0.32
RRP1-202ENST00000471909 UBE2E2Q96LR5 201 aa13.03□□□□□ -0.32
RRP1-202ENST00000471909 TLN2Q9Y4G6 2542 aa13.02□□□□□ -0.32
RRP1-202ENST00000471909 GAGE12HA6NDE8 117 aa13.02□□□□□ -0.32
RRP1-202ENST00000471909 H3BMG7 143 aa13.02□□□□□ -0.32
RRP1-202ENST00000471909 SYNJ2BPP57105 145 aa13.02□□□□□ -0.32
RRP1-202ENST00000471909 SMAGPQ0VAQ4 97 aa13.02□□□□□ -0.32
RRP1-202ENST00000471909 RNF152Q8N8N0 203 aa13.02□□□□□ -0.32
RRP1-202ENST00000471909 TRAV21A0A0B4J279 112 aa13.02□□□□□ -0.33
RRP1-202ENST00000471909 H3BVH4 76 aa13.01□□□□□ -0.33
RRP1-202ENST00000471909 APRG1Q8IVJ8 170 aa13.01□□□□□ -0.33
RRP1-202ENST00000471909 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.01□□□□□ -0.33
RRP1-202ENST00000471909 RNASE4P34096 147 aaKnown RBP13.01□□□□□ -0.33
RRP1-202ENST00000471909 ID1P41134 155 aa13.01□□□□□ -0.33
RRP1-202ENST00000471909 Q8N2B8 174 aa13.01□□□□□ -0.33
RRP1-202ENST00000471909 IGHV4-4A0A075B6R2 117 aa13□□□□□ -0.33
RRP1-202ENST00000471909 HOXD3P31249 432 aaPredicted RBP13□□□□□ -0.33
RRP1-202ENST00000471909 SPANXN1Q5VSR9 72 aa13□□□□□ -0.33
RRP1-202ENST00000471909 TRBV7-9A0A0J9YWB2 115 aa13□□□□□ -0.33
RRP1-202ENST00000471909 RRN3P1Q2M238 152 aa13□□□□□ -0.33
RRP1-202ENST00000471909 ETDBQ3ZM63 59 aa13□□□□□ -0.33
RRP1-202ENST00000471909 CCDC168Q8NDH2 2452 aa12.99□□□□□ -0.33
RRP1-202ENST00000471909 F8VRH5 84 aa12.99□□□□□ -0.33
RRP1-202ENST00000471909 LGALS9O00182 355 aa12.99□□□□□ -0.33
RRP1-202ENST00000471909 GAGE13Q4V321 117 aa12.99□□□□□ -0.33
RRP1-202ENST00000471909 AMTNQ6UX39 209 aa12.99□□□□□ -0.33
RRP1-202ENST00000471909 SH2D6Q7Z4S9 175 aa12.99□□□□□ -0.33
RRP1-202ENST00000471909 OR11H12B2RN74 326 aa12.99□□□□□ -0.33
RRP1-202ENST00000471909 H7C1H1 209 aa12.99□□□□□ -0.33
RRP1-202ENST00000471909 ANXA2RQ3ZCQ2 193 aa12.99□□□□□ -0.33
RRP1-202ENST00000471909 OR11H1Q8NG94 326 aa12.99□□□□□ -0.33
RRP1-202ENST00000471909 OR11H2Q8NH07 326 aa12.99□□□□□ -0.33
RRP1-202ENST00000471909 KMT2BQ9UMN6 2715 aaPredicted RBP12.98□□□□□ -0.33
RRP1-202ENST00000471909 TRBV7-3A0A075B6L6 115 aa12.98□□□□□ -0.33
RRP1-202ENST00000471909 PLA2G2AP14555 144 aa12.98□□□□□ -0.33
RRP1-202ENST00000471909 C18orf65Q6ZTR6 163 aa12.98□□□□□ -0.33
RRP1-202ENST00000471909 MYO9AB2RTY4 2548 aa12.98□□□□□ -0.33
RRP1-202ENST00000471909 TRAV12-1A0A0B4J245 112 aa12.98□□□□□ -0.33
RRP1-202ENST00000471909 SPAG8Q99932 426 aaPredicted RBP12.98□□□□□ -0.33
RRP1-202ENST00000471909 ZNF688P0C7X2 276 aa12.97□□□□□ -0.33
RRP1-202ENST00000471909 SPATA25Q9BR10 227 aa12.97□□□□□ -0.33
RRP1-202ENST00000471909 SMIM2Q9BVW6 85 aa12.97□□□□□ -0.33
RRP1-202ENST00000471909 MYMXA0A1B0GTQ4 84 aa12.97□□□□□ -0.33
RRP1-202ENST00000471909 LINC01619G3V211 115 aa12.97□□□□□ -0.33
RRP1-202ENST00000471909 SPRY2O43597 315 aa12.97□□□□□ -0.33
RRP1-202ENST00000471909 WFDC12Q8WWY7 111 aa12.97□□□□□ -0.33
RRP1-202ENST00000471909 MRAP2Q96G30 205 aa12.97□□□□□ -0.33
RRP1-202ENST00000471909 KLLNB2CW77 178 aa12.96□□□□□ -0.33
RRP1-202ENST00000471909 DEFB136Q30KP8 78 aa12.96□□□□□ -0.33
RRP1-202ENST00000471909 MTURNQ8N3F0 131 aa12.96□□□□□ -0.33
RRP1-202ENST00000471909 FLNAP21333 2647 aaKnown RBP12.96□□□□□ -0.33
RRP1-202ENST00000471909 A0A1B0GWB2 263 aa12.96□□□□□ -0.34
RRP1-202ENST00000471909 K7EQG2 157 aa12.96□□□□□ -0.34
RRP1-202ENST00000471909 PDZD2O15018 2839 aa12.96□□□□□ -0.34
RRP1-202ENST00000471909 SONP18583 2426 aaKnown RBP12.96□□□□□ -0.34
RRP1-202ENST00000471909 J3QKU1 62 aa12.95□□□□□ -0.34
RRP1-202ENST00000471909 GNRH2O43555 120 aa12.95□□□□□ -0.34
RRP1-202ENST00000471909 S100A4P26447 101 aaKnown RBP12.95□□□□□ -0.34
RRP1-202ENST00000471909 ASIPP42127 132 aa12.95□□□□□ -0.34
RRP1-202ENST00000471909 SCGB3A1Q96QR1 104 aa12.95□□□□□ -0.34
RRP1-202ENST00000471909 ORMDL2Q53FV1 153 aa12.95□□□□□ -0.34
RRP1-202ENST00000471909 PRO0461Q9UI25 63 aa12.95□□□□□ -0.34
RRP1-202ENST00000471909 M0R381 172 aa12.94□□□□□ -0.34
RRP1-202ENST00000471909 SNRPD3P62318 126 aaKnown RBP12.94□□□□□ -0.34
RRP1-202ENST00000471909 CYSLTR1Q9Y271 337 aa12.94□□□□□ -0.34
RRP1-202ENST00000471909 HELZ2Q9BYK8 2649 aaKnown RBP12.94□□□□□ -0.34
RRP1-202ENST00000471909 SLURP1P55000 103 aa12.94□□□□□ -0.34
RRP1-202ENST00000471909 TCTEX1D4Q5JR98 221 aa12.94□□□□□ -0.34
RRP1-202ENST00000471909 RNASE3P12724 160 aaKnown RBP12.93□□□□□ -0.34
RRP1-202ENST00000471909 A0A0J9YX75 114 aa12.93□□□□□ -0.34
RRP1-202ENST00000471909 A0A1B0GV72 72 aa12.93□□□□□ -0.34
RRP1-202ENST00000471909 SCGB2A2Q13296 93 aa12.93□□□□□ -0.34
RRP1-202ENST00000471909 TMEM86BQ8N661 226 aa12.93□□□□□ -0.34
RRP1-202ENST00000471909 TOMM6Q96B49 74 aa12.93□□□□□ -0.34
RRP1-202ENST00000471909 PHLDA3Q9Y5J5 127 aa12.93□□□□□ -0.34
RRP1-202ENST00000471909 AKAP9Q99996 3911 aa12.92□□□□□ -0.34
RRP1-202ENST00000471909 SUMO2P61956 95 aaKnown RBP12.92□□□□□ -0.34
RRP1-202ENST00000471909 MED14OSP0DP75 135 aa12.92□□□□□ -0.34
RRP1-202ENST00000471909 NEXN-AS1Q8NBZ9 246 aa12.92□□□□□ -0.34
RRP1-202ENST00000471909 MORN3Q6PF18 240 aaPredicted RBP12.91□□□□□ -0.34
RRP1-202ENST00000471909 PGPEP1Q9NXJ5 209 aa12.91□□□□□ -0.34
RRP1-202ENST00000471909 IGKV3-20P01619 116 aa12.91□□□□□ -0.34
RRP1-202ENST00000471909 INSL3P51460 131 aa12.91□□□□□ -0.34
RRP1-202ENST00000471909 HIST2H2BDQ6DRA6 164 aa12.91□□□□□ -0.34
RRP1-202ENST00000471909 TEX29Q8N6K0 151 aa12.91□□□□□ -0.34
RRP1-202ENST00000471909 ITPR2Q14571 2701 aa12.9□□□□□ -0.34
RRP1-202ENST00000471909 TRAV12-3A0A0B4J271 114 aa12.9□□□□□ -0.34
RRP1-202ENST00000471909 DNAJC9-AS1A6NH13 148 aa12.9□□□□□ -0.34
RRP1-202ENST00000471909 APOMO95445 188 aa12.9□□□□□ -0.34
RRP1-202ENST00000471909 Q6ZSV7 163 aa12.9□□□□□ -0.34
RRP1-202ENST00000471909 DUX3Q96PT4 197 aa12.9□□□□□ -0.34
RRP1-202ENST00000471909 C20orf78Q9BR46 151 aa12.9□□□□□ -0.34
RRP1-202ENST00000471909 PRADC1Q9BSG0 188 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms