RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 RNASEH2CQ8TDP1 164 aaKnown RBP1.86□□□□□ -2.11
HDAC9-221ENST00000471887 S100A16Q96FQ6 103 aaKnown RBP1.86□□□□□ -2.11
HDAC9-221ENST00000471887 SMIM8Q96KF7 97 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 TP53RKQ96S44 253 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 CACFD1Q9UGQ2 172 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 RABAC1Q9UI14 185 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 LOC100506127A0A0U1RQW1 187 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 NBDYA0A0U1RRE5 68 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 C3orf85A0A1B0GTC6 90 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 MEIS3P1A6NDR6 274 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 ISLRO14498 428 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 IFNA10P01566 189 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 IFNA21P01568 189 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 IFNA17P01571 189 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 TSPOP30536 169 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 OR10J1P30954 320 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 SNCAP37840 140 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 AKR1C2P52895 323 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 PIGPP57054 158 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 KRTAP12-1P59990 96 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 SPCS3P61009 180 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 TSPAN5P62079 268 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 SUPT4H1P63272 117 aaKnown RBP1.85□□□□□ -2.11
HDAC9-221ENST00000471887 SURF2Q15527 256 aaPredicted RBP1.85□□□□□ -2.11
HDAC9-221ENST00000471887 C1orf194Q5T5A4 169 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 AMTNQ6UX39 209 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 ZNF767PQ75MW2 155 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 C1orf158Q8N1D5 194 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 ZNRF2Q8NHG8 242 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 Q8WTZ3 238 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 PDCD10Q9BUL8 212 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 TMEM222Q9H0R3 208 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 Q9H521 79 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 ENY2Q9NPA8 101 aa1.85□□□□□ -2.11
HDAC9-221ENST00000471887 DNAH8Q96JB1 4490 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 IGKV1D-37A0A075B6S9 117 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 A0A0J9YX75 114 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 M0R2N4 97 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 CRXO43186 299 aaPredicted RBP1.84□□□□□ -2.11
HDAC9-221ENST00000471887 TNFAIP8O95379 198 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 CFDP00746 253 aaPredicted RBP1.84□□□□□ -2.11
HDAC9-221ENST00000471887 RD3LP0DJH9 198 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 ETV6P41212 452 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 B2MP61769 119 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 MRPS10P82664 201 aaKnown RBP1.84□□□□□ -2.11
HDAC9-221ENST00000471887 PSG9Q00887 426 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 SSBP1Q04837 148 aaKnown RBP1.84□□□□□ -2.11
HDAC9-221ENST00000471887 RRN3P1Q2M238 152 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 SPINK9Q5DT21 86 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 RNASE10Q5GAN6 216 aaKnown RBP1.84□□□□□ -2.11
HDAC9-221ENST00000471887 GDF5OSQ5U4N7 250 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 UBE2DNLQ8IWF7 75 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 TMEM229BQ8NBD8 167 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 OR13C8Q8NGS7 320 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 TERB2Q8NHR7 220 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 LHFPL5Q8TAF8 219 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 GPR146Q96CH1 333 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 TRGV9Q99603 122 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 UPK3BQ9BT76 320 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 NAA60Q9H7X0 242 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.84□□□□□ -2.11
HDAC9-221ENST00000471887 DOK5Q9P104 306 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 COPZ2Q9P299 210 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 TMEM56-RWDD3S4R434 201 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 U3KQ87 197 aa1.84□□□□□ -2.11
HDAC9-221ENST00000471887 PIGBOS1A0A0B4J2F0 54 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 SMIM31A0A1B0GVY4 71 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 DUXBA0A1W2PPF3 345 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 CRYM-AS1A6NIL9 109 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 H3BNG1 76 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 PITX3O75364 302 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 ATP6V1G2O95670 118 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 CD3DP04234 171 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 FABP1P07148 127 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 OR5AL1P0C617 328 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 SULT1A3P0DMM9 295 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 SULT1A4P0DMN0 295 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 SLC25A6P12236 298 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 CXCL2P19875 107 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 S100A7P31151 101 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 CCL18P55774 89 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 TAS2R60P59551 318 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 DAD1P61803 113 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 NEDD8Q15843 81 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 FAM78BQ5VT40 261 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 SNX29P2Q8IUI4 249 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 SELENOHQ8IZQ5 122 aaKnown RBP1.83□□□□□ -2.12
HDAC9-221ENST00000471887 ZFP82Q8N141 532 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 DTD1Q8TEA8 209 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 SMIM4Q8WVI0 70 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 AP3S1Q92572 193 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 C20orf144Q9BQM9 153 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 SLC35B3Q9H1N7 401 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 VCX3AQ9NNX9 186 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 RPRMQ9NS64 109 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 COMMD3Q9UBI1 195 aa1.83□□□□□ -2.12
HDAC9-221ENST00000471887 RABL2AQ9UBK7 228 aaPredicted RBP1.83□□□□□ -2.12
HDAC9-221ENST00000471887 LINC00588Q9Y4M8 146 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms