RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 TMSB15BA0A087X1C1 80 aa7.7□□□□□ -1.18
COL4A3-205ENST00000471862 A0A1B0GV50 99 aa7.7□□□□□ -1.18
COL4A3-205ENST00000471862 IGHV3-30P01768 117 aa7.7□□□□□ -1.18
COL4A3-205ENST00000471862 IGHV3-33P01772 117 aa7.7□□□□□ -1.18
COL4A3-205ENST00000471862 S100A9P06702 114 aaKnown RBP7.7□□□□□ -1.18
COL4A3-205ENST00000471862 CXCL1P09341 107 aa7.7□□□□□ -1.18
COL4A3-205ENST00000471862 IGHV3-30-3P0DP02 117 aa7.7□□□□□ -1.18
COL4A3-205ENST00000471862 IGHV3-30-5P0DP03 117 aa7.7□□□□□ -1.18
COL4A3-205ENST00000471862 TPT1P13693 172 aaKnown RBP7.7□□□□□ -1.18
COL4A3-205ENST00000471862 XGP55808 180 aa7.7□□□□□ -1.18
COL4A3-205ENST00000471862 KRTAP10-1P60331 282 aa7.7□□□□□ -1.18
COL4A3-205ENST00000471862 EIF5AP63241 154 aaKnown RBP7.7□□□□□ -1.18
COL4A3-205ENST00000471862 LAGE3Q14657 143 aa7.7□□□□□ -1.18
COL4A3-205ENST00000471862 Q8N3U1 123 aa7.7□□□□□ -1.18
COL4A3-205ENST00000471862 PHLDA3Q9Y5J5 127 aa7.7□□□□□ -1.18
COL4A3-205ENST00000471862 VPS13BQ7Z7G8 4022 aa7.69□□□□□ -1.18
COL4A3-205ENST00000471862 H2AFB1P0C5Y9 115 aa7.69□□□□□ -1.18
COL4A3-205ENST00000471862 TMUB2Q71RG4 321 aa7.69□□□□□ -1.18
COL4A3-205ENST00000471862 ZFP82Q8N141 532 aa7.69□□□□□ -1.18
COL4A3-205ENST00000471862 Q9HAA7 133 aa7.69□□□□□ -1.18
COL4A3-205ENST00000471862 A0A087WWL8 130 aa7.68□□□□□ -1.18
COL4A3-205ENST00000471862 M0R381 172 aa7.68□□□□□ -1.18
COL4A3-205ENST00000471862 SNAI2O43623 268 aa7.68□□□□□ -1.18
COL4A3-205ENST00000471862 PFDN1O60925 122 aa7.68□□□□□ -1.18
COL4A3-205ENST00000471862 RPL19P84098 196 aaKnown RBP7.68□□□□□ -1.18
COL4A3-205ENST00000471862 FAM74A4Q5TZK3 123 aa7.68□□□□□ -1.18
COL4A3-205ENST00000471862 BAGE2Q86Y30 109 aa7.68□□□□□ -1.18
COL4A3-205ENST00000471862 C11orf52Q96A22 123 aa7.68□□□□□ -1.18
COL4A3-205ENST00000471862 A0A087WWC5 75 aa7.67□□□□□ -1.18
COL4A3-205ENST00000471862 TRAV1-1A0A0B4J248 108 aa7.67□□□□□ -1.18
COL4A3-205ENST00000471862 TRBV10-1A0A0K0K1A3 114 aa7.67□□□□□ -1.18
COL4A3-205ENST00000471862 PSCAO43653 123 aa7.67□□□□□ -1.18
COL4A3-205ENST00000471862 CCL20P78556 96 aa7.67□□□□□ -1.18
COL4A3-205ENST00000471862 NTN5Q8WTR8 489 aaPredicted RBP7.67□□□□□ -1.18
COL4A3-205ENST00000471862 SSBP4Q9BWG4 385 aaPredicted RBP7.67□□□□□ -1.18
COL4A3-205ENST00000471862 GCSHP23434 173 aa7.66□□□□□ -1.18
COL4A3-205ENST00000471862 WFDC2Q14508 124 aa7.66□□□□□ -1.18
COL4A3-205ENST00000471862 DAZ4Q86SG3 579 aaKnown RBP7.66□□□□□ -1.18
COL4A3-205ENST00000471862 Q8N814 137 aa7.66□□□□□ -1.18
COL4A3-205ENST00000471862 OR10AG1Q8NH19 301 aa7.66□□□□□ -1.18
COL4A3-205ENST00000471862 MANBALQ9NQG1 85 aa7.66□□□□□ -1.18
COL4A3-205ENST00000471862 DAZ3Q9NR90 486 aaKnown RBP7.66□□□□□ -1.18
COL4A3-205ENST00000471862 OR5AL1P0C617 328 aa7.65□□□□□ -1.18
COL4A3-205ENST00000471862 RPL35P42766 123 aaKnown RBP7.65□□□□□ -1.18
COL4A3-205ENST00000471862 SULT1A2P50226 295 aa7.65□□□□□ -1.18
COL4A3-205ENST00000471862 RAB5CP51148 216 aa7.65□□□□□ -1.18
COL4A3-205ENST00000471862 UBE2D3P61077 147 aa7.65□□□□□ -1.18
COL4A3-205ENST00000471862 UBE2D2P62837 147 aa7.65□□□□□ -1.18
COL4A3-205ENST00000471862 PRR27Q6MZM9 219 aa7.65□□□□□ -1.18
COL4A3-205ENST00000471862 NIT1Q86X76 327 aa7.65□□□□□ -1.18
COL4A3-205ENST00000471862 TCTE3Q8IZS6 198 aa7.65□□□□□ -1.18
COL4A3-205ENST00000471862 OR10G8Q8NGN5 311 aa7.65□□□□□ -1.18
COL4A3-205ENST00000471862 DERL1Q9BUN8 251 aa7.65□□□□□ -1.18
COL4A3-205ENST00000471862 TM2D2Q9BX73 214 aa7.65□□□□□ -1.18
COL4A3-205ENST00000471862 GNG13Q9P2W3 67 aa7.65□□□□□ -1.18
COL4A3-205ENST00000471862 TRBV7-3A0A075B6L6 115 aa7.64□□□□□ -1.19
COL4A3-205ENST00000471862 IGLV5-52A0A0A0MRZ9 124 aa7.64□□□□□ -1.19
COL4A3-205ENST00000471862 TRAV8-3A0A0A6YYJ7 113 aa7.64□□□□□ -1.19
COL4A3-205ENST00000471862 IGLV2-8P01709 118 aa7.64□□□□□ -1.19
COL4A3-205ENST00000471862 RPL36AP83881 106 aaKnown RBP7.64□□□□□ -1.19
COL4A3-205ENST00000471862 RPL36ALQ969Q0 106 aaKnown RBP7.64□□□□□ -1.19
COL4A3-205ENST00000471862 EPM2AB3EWF7 344 aa7.63□□□□□ -1.19
COL4A3-205ENST00000471862 RAB4BP61018 213 aa7.63□□□□□ -1.19
COL4A3-205ENST00000471862 TOR2AQ5JU69 321 aa7.63□□□□□ -1.19
COL4A3-205ENST00000471862 EIF5AL1Q6IS14 154 aaKnown RBP7.63□□□□□ -1.19
COL4A3-205ENST00000471862 NEXN-AS1Q8NBZ9 246 aa7.63□□□□□ -1.19
COL4A3-205ENST00000471862 TMEM70Q9BUB7 260 aa7.63□□□□□ -1.19
COL4A3-205ENST00000471862 CHCHD7Q9BUK0 85 aa7.63□□□□□ -1.19
COL4A3-205ENST00000471862 KIF25-AS1Q9Y6Z4 181 aa7.63□□□□□ -1.19
COL4A3-205ENST00000471862 MUC21A0A0G2JKD1 596 aa7.62□□□□□ -1.19
COL4A3-205ENST00000471862 MUC21A0A140T8X8 626 aa7.62□□□□□ -1.19
COL4A3-205ENST00000471862 C19orf71A6NCJ1 209 aa7.62□□□□□ -1.19
COL4A3-205ENST00000471862 IGLC6P0CF74 106 aa7.62□□□□□ -1.19
COL4A3-205ENST00000471862 CENPWQ5EE01 88 aa7.62□□□□□ -1.19
COL4A3-205ENST00000471862 SPANXN1Q5VSR9 72 aa7.62□□□□□ -1.19
COL4A3-205ENST00000471862 DNAJC30Q96LL9 226 aa7.62□□□□□ -1.19
COL4A3-205ENST00000471862 C1QBP02746 253 aa7.61□□□□□ -1.19
COL4A3-205ENST00000471862 MEF2BQ02080 365 aaPredicted RBP7.61□□□□□ -1.19
COL4A3-205ENST00000471862 ZNF56Q15929 161 aa7.61□□□□□ -1.19
COL4A3-205ENST00000471862 ATRAIDQ6UW56 229 aa7.61□□□□□ -1.19
COL4A3-205ENST00000471862 SLC51BQ86UW2 128 aa7.61□□□□□ -1.19
COL4A3-205ENST00000471862 SMIM12Q96EX1 92 aa7.61□□□□□ -1.19
COL4A3-205ENST00000471862 TRBV20OR9-2A0A075B6H5 130 aa7.6□□□□□ -1.19
COL4A3-205ENST00000471862 TRBV6-8A0A0A6YYG3 113 aa7.6□□□□□ -1.19
COL4A3-205ENST00000471862 RAB19A4D1S5 217 aa7.6□□□□□ -1.19
COL4A3-205ENST00000471862 TEX46H3BTG2 121 aa7.6□□□□□ -1.19
COL4A3-205ENST00000471862 Q6ZNX1 250 aa7.6□□□□□ -1.19
COL4A3-205ENST00000471862 FAM30AQ9NZY2 134 aa7.6□□□□□ -1.19
COL4A3-205ENST00000471862 VAX2Q9UIW0 290 aa7.6□□□□□ -1.19
COL4A3-205ENST00000471862 KLK12Q9UKR0 248 aa7.6□□□□□ -1.19
COL4A3-205ENST00000471862 COX11Q9Y6N1 276 aa7.6□□□□□ -1.19
COL4A3-205ENST00000471862 URGCP-MRPS24S4R325 110 aa7.6□□□□□ -1.19
COL4A3-205ENST00000471862 A0A087WX48 190 aa7.59□□□□□ -1.19
COL4A3-205ENST00000471862 RBFOX3A6NFN3 312 aa7.59□□□□□ -1.19
COL4A3-205ENST00000471862 LECT2O14960 151 aa7.59□□□□□ -1.19
COL4A3-205ENST00000471862 PDE6DO43924 150 aa7.59□□□□□ -1.19
COL4A3-205ENST00000471862 GZMBP10144 247 aa7.59□□□□□ -1.19
COL4A3-205ENST00000471862 BCL2P10415 239 aa7.59□□□□□ -1.19
COL4A3-205ENST00000471862 RPS20P60866 119 aaKnown RBP7.59□□□□□ -1.19
COL4A3-205ENST00000471862 HAMPP81172 84 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms