RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 UBE2D2P62837 147 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 SERF2P84101 59 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 ZNF56Q15929 161 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 ZFP2Q6ZN57 461 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 ZCCHC23Q6ZST2 131 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 FAM216BQ8N7L0 139 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 C3orf56Q8N813 242 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 CIRBP-AS1Q8TBR5 109 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 OSTCQ9NRP0 149 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 GNG13Q9P2W3 67 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 ARFGEF1Q9Y6D6 1849 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 LRP5O75197 1615 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 STRCP1A6NGW2 1772 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 LOC285556D6RIA3 1793 aa2.23□□□□□ -2.05
SCN3A-207ENST00000471697 WDR90Q96KV7 1748 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 FAM208AQ9UK61 1670 aaKnown RBP2.22□□□□□ -2.05
SCN3A-207ENST00000471697 KIAA1549Q9HCM3 1950 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 TRAV13-2A0A0B4J235 113 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 A0A0B4J2C4 111 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 IGHV1-3A0A0C4DH29 117 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 IGHV3-64DA0A0J9YX35 117 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 A8MWP4 228 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 J3QLW9 94 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 SLC25A20O43772 301 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 LEPROTL1O95214 131 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 IGHV1-46P01743 117 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 IGKV1-16P04430 117 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 ZNF883P0CG24 379 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 CD28P10747 220 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 FUSP35637 526 aaKnown RBP eCLIP2.22□□□□□ -2.05
SCN3A-207ENST00000471697 DSCR4P56555 118 aaPredicted RBP2.22□□□□□ -2.05
SCN3A-207ENST00000471697 RBM3P98179 157 aaKnown RBP2.22□□□□□ -2.05
SCN3A-207ENST00000471697 RPL18Q07020 188 aaKnown RBP2.22□□□□□ -2.05
SCN3A-207ENST00000471697 NDUFA11Q86Y39 141 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 Q96M85 177 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 SLC50A1Q9BRV3 221 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 ZNF407Q9C0G0 2248 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 PLXNA3P51805 1871 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 MYO9BQ13459 2157 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 RREB1Q92766 1687 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 ROBO1Q9Y6N7 1651 aa2.22□□□□□ -2.05
SCN3A-207ENST00000471697 SIP14410 1827 aa2.21□□□□□ -2.05
SCN3A-207ENST00000471697 KIF26BQ2KJY2 2108 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 LCTP09848 1927 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 A0A1B0GVY2 172 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 A6NDX4 124 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 H3BMM0 161 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 C3orf84H3BNL1 204 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 H7C423 109 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 K7ERJ3 54 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 LECT2O14960 151 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 IGKV1D-33P01593 117 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 IGKV1-33P01594 117 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 PIRTP0C851 137 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 MDKP21741 143 aaPredicted RBP2.21□□□□□ -2.06
SCN3A-207ENST00000471697 RPL36AP83881 106 aaKnown RBP2.21□□□□□ -2.06
SCN3A-207ENST00000471697 SYCNQ0VAF6 134 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 KLKP1Q107X0 134 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 IL17AQ16552 155 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 C9orf129Q5T035 196 aaKnown RBP2.21□□□□□ -2.06
SCN3A-207ENST00000471697 LCE3AQ5TA76 89 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 SPANXN1Q5VSR9 72 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 NCBP2-AS2Q69YL0 99 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 C16orf47Q6ZP98 133 aaPredicted RBP2.21□□□□□ -2.06
SCN3A-207ENST00000471697 MIR17HGQ75NE6 70 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 ADM2Q7Z4H4 148 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.21□□□□□ -2.06
SCN3A-207ENST00000471697 Q8N9W7 124 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 UBE2WQ96B02 151 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 TIMM21Q9BVV7 248 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 CYP4F30PQ9H0H9 118 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 ZNRD1Q9P1U0 126 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 SMAD5-AS1Q9Y6J3 95 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 LAMA4Q16363 1823 aa2.21□□□□□ -2.06
SCN3A-207ENST00000471697 MDC1Q14676 2089 aaKnown RBP2.21□□□□□ -2.06
SCN3A-207ENST00000471697 IGKV3D-20A0A0C4DH25 116 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 TRBV10-2A0A0K0K1G8 114 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 A0A1W2PQD3 144 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 TMEM223A0PJW6 202 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 CRYM-AS1A6NIL9 109 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 CFC1P0CG37 223 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 CCL5P13501 91 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 EFNA4P52798 201 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 ZNF117Q03924 483 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 ATXN8Q156A1 80 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 ESRGQ1W209 222 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 CCL4L1Q8NHW4 92 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 TTTY13Q9BZ97 58 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 NHP2Q9NX24 153 aaKnown RBP2.2□□□□□ -2.06
SCN3A-207ENST00000471697 HILPDAQ9Y5L2 63 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 MYOFQ9NZM1 2061 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 SPTBP11277 2137 aa2.2□□□□□ -2.06
SCN3A-207ENST00000471697 DDX60LQ5H9U9 1706 aaKnown RBP2.2□□□□□ -2.06
SCN3A-207ENST00000471697 NUP214P35658 2090 aaPredicted RBP2.19□□□□□ -2.06
SCN3A-207ENST00000471697 TRBV7-3A0A075B6L6 115 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 TRAV7A0A075B6U4 112 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 TRBV10-3A0A0K0K1G6 114 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 A6NIN4 97 aa2.19□□□□□ -2.06
SCN3A-207ENST00000471697 C17orf51A8MQB3 221 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms