RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 PIK3CD-AS1Q5SR53 167 aa13.61□□□□□ -0.23
PSPC1-203ENST00000471658 ATP5L2Q7Z4Y8 100 aa13.61□□□□□ -0.23
PSPC1-203ENST00000471658 KIF25-AS1Q9Y6Z4 181 aa13.61□□□□□ -0.23
PSPC1-203ENST00000471658 FAM74A4Q5TZK3 123 aa13.6□□□□□ -0.23
PSPC1-203ENST00000471658 OR4C5Q8NGB2 326 aa13.6□□□□□ -0.23
PSPC1-203ENST00000471658 C11orf45Q8TAV5 145 aa13.6□□□□□ -0.23
PSPC1-203ENST00000471658 TRBV24-1A0A075B6N3 115 aa13.59□□□□□ -0.23
PSPC1-203ENST00000471658 A8MWV9 139 aa13.59□□□□□ -0.23
PSPC1-203ENST00000471658 AP1S3Q96PC3 154 aa13.59□□□□□ -0.23
PSPC1-203ENST00000471658 TRAV4A0A0B4J268 109 aa13.58□□□□□ -0.24
PSPC1-203ENST00000471658 TRGC1P0CF51 173 aa13.58□□□□□ -0.24
PSPC1-203ENST00000471658 LINC00315P59091 139 aa13.58□□□□□ -0.24
PSPC1-203ENST00000471658 UFSP1Q6NVU6 142 aa13.58□□□□□ -0.24
PSPC1-203ENST00000471658 EDA2RQ9HAV5 297 aa13.58□□□□□ -0.24
PSPC1-203ENST00000471658 COLCA2A8K830 154 aa13.57□□□□□ -0.24
PSPC1-203ENST00000471658 RAB4BP61018 213 aa13.57□□□□□ -0.24
PSPC1-203ENST00000471658 Q6ZSN1 163 aa13.57□□□□□ -0.24
PSPC1-203ENST00000471658 FAM210BQ96KR6 192 aa13.57□□□□□ -0.24
PSPC1-203ENST00000471658 NDUFAF3Q9BU61 184 aa13.57□□□□□ -0.24
PSPC1-203ENST00000471658 NACAE9PAV3 2078 aa13.57□□□□□ -0.24
PSPC1-203ENST00000471658 TEX48A0A1B0GUV7 120 aa13.57□□□□□ -0.24
PSPC1-203ENST00000471658 A0A1B0GW15 77 aa13.57□□□□□ -0.24
PSPC1-203ENST00000471658 TMEM136Q6ZRR5 245 aa13.57□□□□□ -0.24
PSPC1-203ENST00000471658 Q6ZTC4 211 aa13.57□□□□□ -0.24
PSPC1-203ENST00000471658 AMN1Q8IY45 258 aa13.57□□□□□ -0.24
PSPC1-203ENST00000471658 C18orf15Q96N68 181 aa13.57□□□□□ -0.24
PSPC1-203ENST00000471658 TMEM191AQ9H0A3 160 aa13.57□□□□□ -0.24
PSPC1-203ENST00000471658 MGPP08493 103 aa13.56□□□□□ -0.24
PSPC1-203ENST00000471658 DPH3P1Q9H4G8 78 aa13.56□□□□□ -0.24
PSPC1-203ENST00000471658 SMIM17P0DL12 118 aa13.55□□□□□ -0.24
PSPC1-203ENST00000471658 HTN3P15516 51 aa13.55□□□□□ -0.24
PSPC1-203ENST00000471658 HOXA5P20719 270 aa13.55□□□□□ -0.24
PSPC1-203ENST00000471658 SMIM15Q7Z3B0 74 aa13.55□□□□□ -0.24
PSPC1-203ENST00000471658 GATD1Q8NB37 220 aa13.55□□□□□ -0.24
PSPC1-203ENST00000471658 RNF185Q96GF1 192 aa13.55□□□□□ -0.24
PSPC1-203ENST00000471658 STAB2Q8WWQ8 2551 aa13.55□□□□□ -0.24
PSPC1-203ENST00000471658 FHL2Q14192 279 aa13.54□□□□□ -0.24
PSPC1-203ENST00000471658 S100A8P05109 93 aa13.53□□□□□ -0.24
PSPC1-203ENST00000471658 RAB4AP20338 218 aa13.53□□□□□ -0.24
PSPC1-203ENST00000471658 FAM104BQ5XKR9 115 aa13.53□□□□□ -0.24
PSPC1-203ENST00000471658 RASL11AQ6T310 242 aa13.53□□□□□ -0.24
PSPC1-203ENST00000471658 F5H697 171 aa13.53□□□□□ -0.24
PSPC1-203ENST00000471658 ATP5G1P05496 136 aa13.53□□□□□ -0.24
PSPC1-203ENST00000471658 TRAV26-2A0A0B4J265 109 aa13.52□□□□□ -0.25
PSPC1-203ENST00000471658 TRGV4A0A0C4DH28 118 aa13.52□□□□□ -0.25
PSPC1-203ENST00000471658 GAS8-AS1O95177 125 aa13.52□□□□□ -0.25
PSPC1-203ENST00000471658 SLAQ13239 276 aa13.52□□□□□ -0.25
PSPC1-203ENST00000471658 ZNF56Q15929 161 aa13.52□□□□□ -0.25
PSPC1-203ENST00000471658 ZFP2Q6ZN57 461 aa13.52□□□□□ -0.25
PSPC1-203ENST00000471658 GNB1LQ9BYB4 327 aa13.52□□□□□ -0.25
PSPC1-203ENST00000471658 F5H768 121 aa13.51□□□□□ -0.25
PSPC1-203ENST00000471658 RHODO00212 210 aa13.51□□□□□ -0.25
PSPC1-203ENST00000471658 MRPL51Q4U2R6 128 aaKnown RBP13.51□□□□□ -0.25
PSPC1-203ENST00000471658 SUMO4Q6EEV6 95 aa13.51□□□□□ -0.25
PSPC1-203ENST00000471658 Q9UF83 564 aa13.51□□□□□ -0.25
PSPC1-203ENST00000471658 SMKR1H3BMG3 65 aa13.5□□□□□ -0.25
PSPC1-203ENST00000471658 KIAA1644Q3SXP7 199 aa13.5□□□□□ -0.25
PSPC1-203ENST00000471658 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.5□□□□□ -0.25
PSPC1-203ENST00000471658 P0DMU3 169 aa13.5□□□□□ -0.25
PSPC1-203ENST00000471658 FAM231AP0DMU4 169 aa13.5□□□□□ -0.25
PSPC1-203ENST00000471658 FAM231CP0DMU5 169 aa13.5□□□□□ -0.25
PSPC1-203ENST00000471658 GATA1P15976 413 aaPredicted RBP13.5□□□□□ -0.25
PSPC1-203ENST00000471658 MRPL18Q9H0U6 180 aaKnown RBP13.5□□□□□ -0.25
PSPC1-203ENST00000471658 NCR2O95944 276 aa13.49□□□□□ -0.25
PSPC1-203ENST00000471658 RAB5AP20339 215 aa13.49□□□□□ -0.25
PSPC1-203ENST00000471658 RPS10P46783 165 aaKnown RBP13.49□□□□□ -0.25
PSPC1-203ENST00000471658 SLC25A29Q8N8R3 303 aa13.49□□□□□ -0.25
PSPC1-203ENST00000471658 TRAPPC1Q9Y5R8 145 aa13.49□□□□□ -0.25
PSPC1-203ENST00000471658 TGP01266 2768 aa13.48□□□□□ -0.25
PSPC1-203ENST00000471658 HLA-DQA1P01909 254 aa13.48□□□□□ -0.25
PSPC1-203ENST00000471658 APCSP02743 223 aa13.48□□□□□ -0.25
PSPC1-203ENST00000471658 COX19Q49B96 90 aa13.48□□□□□ -0.25
PSPC1-203ENST00000471658 FRZBQ92765 325 aa13.48□□□□□ -0.25
PSPC1-203ENST00000471658 HHLA3Q9XRX5 114 aa13.48□□□□□ -0.25
PSPC1-203ENST00000471658 DEFB131BA0A096LNP1 70 aa13.47□□□□□ -0.25
PSPC1-203ENST00000471658 A0A0J9YY99 117 aa13.47□□□□□ -0.25
PSPC1-203ENST00000471658 CIDEAO60543 219 aa13.47□□□□□ -0.25
PSPC1-203ENST00000471658 FABP9Q0Z7S8 132 aa13.47□□□□□ -0.25
PSPC1-203ENST00000471658 LOC100131303A0A0U1RQF7 123 aa13.46□□□□□ -0.25
PSPC1-203ENST00000471658 M0QY20 66 aa13.46□□□□□ -0.25
PSPC1-203ENST00000471658 D6R8Y8 96 aa13.46□□□□□ -0.26
PSPC1-203ENST00000471658 CRYBA4P53673 196 aa13.46□□□□□ -0.26
PSPC1-203ENST00000471658 RPL39LQ96EH5 51 aaKnown RBP13.46□□□□□ -0.26
PSPC1-203ENST00000471658 VSIG2Q96IQ7 327 aa13.46□□□□□ -0.26
PSPC1-203ENST00000471658 PRO0255Q9UI72 69 aa13.46□□□□□ -0.26
PSPC1-203ENST00000471658 TRAV26-1A0A087WT03 109 aa13.45□□□□□ -0.26
PSPC1-203ENST00000471658 TRAV10A0A0B4J240 114 aa13.45□□□□□ -0.26
PSPC1-203ENST00000471658 K7EQD1 137 aa13.45□□□□□ -0.26
PSPC1-203ENST00000471658 MT-ND6P03923 174 aa13.45□□□□□ -0.26
PSPC1-203ENST00000471658 CKS2P33552 79 aa13.45□□□□□ -0.26
PSPC1-203ENST00000471658 PHLDA1Q8WV24 401 aaPredicted RBP13.45□□□□□ -0.26
PSPC1-203ENST00000471658 TRBV6-4A0A1B0GX49 114 aa13.44□□□□□ -0.26
PSPC1-203ENST00000471658 TRGC2P03986 189 aa13.44□□□□□ -0.26
PSPC1-203ENST00000471658 MRAP2Q96G30 205 aa13.44□□□□□ -0.26
PSPC1-203ENST00000471658 PAX4O43316 350 aa13.43□□□□□ -0.26
PSPC1-203ENST00000471658 NRACQ8N912 160 aa13.42□□□□□ -0.26
PSPC1-203ENST00000471658 NEXN-AS1Q8NBZ9 246 aa13.42□□□□□ -0.26
PSPC1-203ENST00000471658 DNAH7Q8WXX0 4024 aa13.41□□□□□ -0.26
PSPC1-203ENST00000471658 GAGE12JA6NER3 117 aa13.41□□□□□ -0.26
PSPC1-203ENST00000471658 NPYP01303 97 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms