RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 SFRP2Q96HF1 295 aa8.6□□□□□ -1.03
PPP1R3F-204ENST00000471261 TRAV8-6A0A0B4J262 113 aa8.59□□□□□ -1.03
PPP1R3F-204ENST00000471261 TAGLN2P37802 199 aaKnown RBP8.59□□□□□ -1.03
PPP1R3F-204ENST00000471261 BLOC1S1P78537 153 aa8.59□□□□□ -1.03
PPP1R3F-204ENST00000471261 OR10AG1Q8NH19 301 aa8.59□□□□□ -1.03
PPP1R3F-204ENST00000471261 TPPP3Q9BW30 176 aa8.59□□□□□ -1.03
PPP1R3F-204ENST00000471261 BOLA1Q9Y3E2 137 aa8.59□□□□□ -1.03
PPP1R3F-204ENST00000471261 TNFRSF18Q9Y5U5 241 aa8.59□□□□□ -1.03
PPP1R3F-204ENST00000471261 IGHV3-38A0A0C4DH36 116 aa8.58□□□□□ -1.04
PPP1R3F-204ENST00000471261 IGLV2-8P01709 118 aa8.58□□□□□ -1.04
PPP1R3F-204ENST00000471261 CRYGDP07320 174 aa8.58□□□□□ -1.04
PPP1R3F-204ENST00000471261 DNAH10OSP0CZ25 163 aa8.58□□□□□ -1.04
PPP1R3F-204ENST00000471261 MED14OSP0DP75 135 aa8.58□□□□□ -1.04
PPP1R3F-204ENST00000471261 BTF3P20290 206 aaKnown RBP8.58□□□□□ -1.04
PPP1R3F-204ENST00000471261 TIRAPP58753 221 aa8.58□□□□□ -1.04
PPP1R3F-204ENST00000471261 SPANXN1Q5VSR9 72 aa8.58□□□□□ -1.04
PPP1R3F-204ENST00000471261 GTSF1LQ9H1H1 148 aa8.58□□□□□ -1.04
PPP1R3F-204ENST00000471261 Q9UF83 564 aa8.58□□□□□ -1.04
PPP1R3F-204ENST00000471261 TRBV20OR9-2A0A075B6H5 130 aa8.57□□□□□ -1.04
PPP1R3F-204ENST00000471261 CXCL1P09341 107 aa8.57□□□□□ -1.04
PPP1R3F-204ENST00000471261 GZMBP10144 247 aa8.57□□□□□ -1.04
PPP1R3F-204ENST00000471261 ZNF56Q15929 161 aa8.57□□□□□ -1.04
PPP1R3F-204ENST00000471261 LELP1Q5T871 98 aa8.57□□□□□ -1.04
PPP1R3F-204ENST00000471261 OR2D3Q8NGH3 330 aa8.57□□□□□ -1.04
PPP1R3F-204ENST00000471261 SMIM12Q96EX1 92 aa8.57□□□□□ -1.04
PPP1R3F-204ENST00000471261 RBFOX3A6NFN3 312 aa8.56□□□□□ -1.04
PPP1R3F-204ENST00000471261 P01737 135 aa8.56□□□□□ -1.04
PPP1R3F-204ENST00000471261 OR5AL1P0C617 328 aa8.56□□□□□ -1.04
PPP1R3F-204ENST00000471261 NFE4Q86UQ8 179 aa8.56□□□□□ -1.04
PPP1R3F-204ENST00000471261 BIN3Q9NQY0 253 aa8.56□□□□□ -1.04
PPP1R3F-204ENST00000471261 MSRB1Q9NZV6 116 aa8.56□□□□□ -1.04
PPP1R3F-204ENST00000471261 C19orf71A6NCJ1 209 aa8.55□□□□□ -1.04
PPP1R3F-204ENST00000471261 C16orf90A8MZG2 172 aa8.55□□□□□ -1.04
PPP1R3F-204ENST00000471261 K7EP13 123 aa8.55□□□□□ -1.04
PPP1R3F-204ENST00000471261 SNAI2O43623 268 aa8.55□□□□□ -1.04
PPP1R3F-204ENST00000471261 IGHV3-30P01768 117 aa8.55□□□□□ -1.04
PPP1R3F-204ENST00000471261 IGHV3-33P01772 117 aa8.55□□□□□ -1.04
PPP1R3F-204ENST00000471261 IGHV3-30-3P0DP02 117 aa8.55□□□□□ -1.04
PPP1R3F-204ENST00000471261 IGHV3-30-5P0DP03 117 aa8.55□□□□□ -1.04
PPP1R3F-204ENST00000471261 CEBPGP53567 150 aa8.55□□□□□ -1.04
PPP1R3F-204ENST00000471261 RPS20P60866 119 aaKnown RBP8.55□□□□□ -1.04
PPP1R3F-204ENST00000471261 LINC01556Q5JQF7 62 aa8.55□□□□□ -1.04
PPP1R3F-204ENST00000471261 SPATA12Q7Z6I5 190 aa8.55□□□□□ -1.04
PPP1R3F-204ENST00000471261 C10orf126Q8N4M7 172 aa8.55□□□□□ -1.04
PPP1R3F-204ENST00000471261 SSBP4Q9BWG4 385 aaPredicted RBP8.55□□□□□ -1.04
PPP1R3F-204ENST00000471261 XKRY2A2RUG3 117 aa8.54□□□□□ -1.04
PPP1R3F-204ENST00000471261 F5H697 171 aa8.54□□□□□ -1.04
PPP1R3F-204ENST00000471261 SMIM17P0DL12 118 aa8.54□□□□□ -1.04
PPP1R3F-204ENST00000471261 LINC00694P0DN24 101 aa8.54□□□□□ -1.04
PPP1R3F-204ENST00000471261 Q6ZRN7 208 aaPredicted RBP8.54□□□□□ -1.04
PPP1R3F-204ENST00000471261 FER1L6-AS1Q8NA97 138 aa8.54□□□□□ -1.04
PPP1R3F-204ENST00000471261 TRBV10-1A0A0K0K1A3 114 aa8.53□□□□□ -1.04
PPP1R3F-204ENST00000471261 RAB4BP61018 213 aa8.53□□□□□ -1.04
PPP1R3F-204ENST00000471261 RPL36AP83881 106 aaKnown RBP8.53□□□□□ -1.04
PPP1R3F-204ENST00000471261 TOR2AQ5JU69 321 aa8.53□□□□□ -1.04
PPP1R3F-204ENST00000471261 LYPD6BQ8NI32 183 aa8.53□□□□□ -1.04
PPP1R3F-204ENST00000471261 RPL36ALQ969Q0 106 aaKnown RBP8.53□□□□□ -1.04
PPP1R3F-204ENST00000471261 AP1S3Q96PC3 154 aa8.53□□□□□ -1.04
PPP1R3F-204ENST00000471261 EIF5A2Q9GZV4 153 aaKnown RBP8.53□□□□□ -1.04
PPP1R3F-204ENST00000471261 A0A087WWC5 75 aa8.52□□□□□ -1.05
PPP1R3F-204ENST00000471261 TMEM250H0YL14 139 aa8.52□□□□□ -1.05
PPP1R3F-204ENST00000471261 ERVFC1-1P60608 527 aa8.52□□□□□ -1.05
PPP1R3F-204ENST00000471261 NUDT10Q8NFP7 164 aa8.52□□□□□ -1.05
PPP1R3F-204ENST00000471261 OCC1Q8TAD7 63 aa8.52□□□□□ -1.05
PPP1R3F-204ENST00000471261 NUDT11Q96G61 164 aa8.52□□□□□ -1.05
PPP1R3F-204ENST00000471261 RNASE7Q9H1E1 156 aaKnown RBP8.52□□□□□ -1.05
PPP1R3F-204ENST00000471261 Q9HAA7 133 aa8.52□□□□□ -1.05
PPP1R3F-204ENST00000471261 DNAH11Q96DT5 4516 aa8.51□□□□□ -1.05
PPP1R3F-204ENST00000471261 TRBV7-3A0A075B6L6 115 aa8.51□□□□□ -1.05
PPP1R3F-204ENST00000471261 K7EN84 100 aa8.51□□□□□ -1.05
PPP1R3F-204ENST00000471261 EREGO14944 169 aa8.51□□□□□ -1.05
PPP1R3F-204ENST00000471261 PSCAO43653 123 aa8.51□□□□□ -1.05
PPP1R3F-204ENST00000471261 MGPP08493 103 aa8.51□□□□□ -1.05
PPP1R3F-204ENST00000471261 IGLC6P0CF74 106 aa8.51□□□□□ -1.05
PPP1R3F-204ENST00000471261 LYZL1Q6UWQ5 148 aa8.51□□□□□ -1.05
PPP1R3F-204ENST00000471261 Q8N3U1 123 aa8.51□□□□□ -1.05
PPP1R3F-204ENST00000471261 RPP21Q9H633 154 aaKnown RBP8.51□□□□□ -1.05
PPP1R3F-204ENST00000471261 KIAA1109Q2LD37 5005 aa8.51□□□□□ -1.05
PPP1R3F-204ENST00000471261 F2Z2F3 143 aa8.5□□□□□ -1.05
PPP1R3F-204ENST00000471261 KRTAP10-2P60368 255 aa8.5□□□□□ -1.05
PPP1R3F-204ENST00000471261 UBE2D3P61077 147 aa8.5□□□□□ -1.05
PPP1R3F-204ENST00000471261 UBE2D2P62837 147 aa8.5□□□□□ -1.05
PPP1R3F-204ENST00000471261 CACNG7P62955 275 aa8.5□□□□□ -1.05
PPP1R3F-204ENST00000471261 URGCP-MRPS24S4R325 110 aa8.5□□□□□ -1.05
PPP1R3F-204ENST00000471261 IBA57-AS1B1ANH7 110 aa8.49□□□□□ -1.05
PPP1R3F-204ENST00000471261 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.49□□□□□ -1.05
PPP1R3F-204ENST00000471261 NEXN-AS1Q8NBZ9 246 aa8.49□□□□□ -1.05
PPP1R3F-204ENST00000471261 FAM210AQ96ND0 272 aa8.49□□□□□ -1.05
PPP1R3F-204ENST00000471261 KIF25-AS1Q9Y6Z4 181 aa8.49□□□□□ -1.05
PPP1R3F-204ENST00000471261 DYNC1H1Q14204 4646 aaKnown RBP8.48□□□□□ -1.05
PPP1R3F-204ENST00000471261 NTF3P20783 257 aa8.48□□□□□ -1.05
PPP1R3F-204ENST00000471261 FUSP35637 526 aaKnown RBP eCLIP8.48□□□□□ -1.05
PPP1R3F-204ENST00000471261 KCNIP4Q6PIL6 250 aa8.48□□□□□ -1.05
PPP1R3F-204ENST00000471261 DAZ4Q86SG3 579 aaKnown RBP8.48□□□□□ -1.05
PPP1R3F-204ENST00000471261 OR10G8Q8NGN5 311 aa8.48□□□□□ -1.05
PPP1R3F-204ENST00000471261 SMIM7Q9BQ49 75 aa8.48□□□□□ -1.05
PPP1R3F-204ENST00000471261 DAZ3Q9NR90 486 aaKnown RBP8.48□□□□□ -1.05
PPP1R3F-204ENST00000471261 A0A087WTM6 91 aa8.47□□□□□ -1.05
PPP1R3F-204ENST00000471261 TRGC1P0CF51 173 aa8.47□□□□□ -1.05
PPP1R3F-204ENST00000471261 LAGE3Q14657 143 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms