RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 APOC4P55056 127 aa6.65□□□□□ -1.34
PTPRE-207ENST00000471218 LGALS9BQ3B8N2 356 aa6.65□□□□□ -1.34
PTPRE-207ENST00000471218 MRPL51Q4U2R6 128 aaKnown RBP6.65□□□□□ -1.34
PTPRE-207ENST00000471218 ZNF705AQ6ZN79 300 aaPredicted RBP6.65□□□□□ -1.34
PTPRE-207ENST00000471218 TMEM263Q8WUH6 116 aaKnown RBP6.65□□□□□ -1.34
PTPRE-207ENST00000471218 PRELID3AQ96N28 172 aa6.65□□□□□ -1.34
PTPRE-207ENST00000471218 LINC01587Q99440 93 aa6.65□□□□□ -1.34
PTPRE-207ENST00000471218 CSTL1Q9H114 145 aa6.65□□□□□ -1.34
PTPRE-207ENST00000471218 NXT2Q9NPJ8 142 aaKnown RBP6.65□□□□□ -1.34
PTPRE-207ENST00000471218 DYNC2H1Q8NCM8 4307 aaKnown RBP6.64□□□□□ -1.35
PTPRE-207ENST00000471218 LINC01546A6NGU7 62 aa6.64□□□□□ -1.35
PTPRE-207ENST00000471218 LINC01549A6NIU2 74 aa6.64□□□□□ -1.35
PTPRE-207ENST00000471218 TCAPO15273 167 aa6.64□□□□□ -1.35
PTPRE-207ENST00000471218 GNRH2O43555 120 aa6.64□□□□□ -1.35
PTPRE-207ENST00000471218 SMIM6P0DI80 62 aa6.64□□□□□ -1.35
PTPRE-207ENST00000471218 DAZ2Q13117 558 aaKnown RBP6.64□□□□□ -1.35
PTPRE-207ENST00000471218 AMN1Q8IY45 258 aa6.64□□□□□ -1.35
PTPRE-207ENST00000471218 RNF185Q96GF1 192 aa6.64□□□□□ -1.35
PTPRE-207ENST00000471218 C16orf74Q96GX8 76 aa6.64□□□□□ -1.35
PTPRE-207ENST00000471218 C20orf78Q9BR46 151 aa6.64□□□□□ -1.35
PTPRE-207ENST00000471218 TMEM208Q9BTX3 173 aa6.64□□□□□ -1.35
PTPRE-207ENST00000471218 HUWE1Q7Z6Z7 4374 aaKnown RBP6.64□□□□□ -1.35
PTPRE-207ENST00000471218 D6R8Y8 96 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 H7C1H1 209 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 SERF1AO75920 110 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 GIG44P09565 113 aaPredicted RBP6.63□□□□□ -1.35
PTPRE-207ENST00000471218 RBMY1A1P0DJD3 496 aaKnown RBP6.63□□□□□ -1.35
PTPRE-207ENST00000471218 RBMY1CP0DJD4 496 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 EVI2AP22794 236 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 RBMY1FQ15415 496 aaKnown RBP6.63□□□□□ -1.35
PTPRE-207ENST00000471218 ZNF124Q15973 351 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 KIAA1644Q3SXP7 199 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 ZFP2Q6ZN57 461 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 Q6ZQT7 251 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 C1orf158Q8N1D5 194 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 C11orf72Q8NBR9 251 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 CSNK1G2-AS1Q8NCQ2 148 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 RNASE8Q8TDE3 154 aaKnown RBP6.63□□□□□ -1.35
PTPRE-207ENST00000471218 RASL10AQ92737 203 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 HIST1H2BLQ99880 126 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 SPATA25Q9BR10 227 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 TM2D3Q9BRN9 247 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 MAP1LC3AQ9H492 121 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 AP5S1Q9NUS5 200 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 MSRB1Q9NZV6 116 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 XCL2Q9UBD3 114 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 KIF25-AS1Q9Y6Z4 181 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 SACSQ9NZJ4 4579 aa6.63□□□□□ -1.35
PTPRE-207ENST00000471218 G0S2P27469 103 aa6.62□□□□□ -1.35
PTPRE-207ENST00000471218 AKR1D1P51857 326 aa6.62□□□□□ -1.35
PTPRE-207ENST00000471218 ZNF876PQ49A33 203 aa6.62□□□□□ -1.35
PTPRE-207ENST00000471218 MDFICQ9P1T7 246 aa6.62□□□□□ -1.35
PTPRE-207ENST00000471218 TRBV6-5A0A0K0K1A5 114 aa6.61□□□□□ -1.35
PTPRE-207ENST00000471218 HSBP1O75506 76 aa6.61□□□□□ -1.35
PTPRE-207ENST00000471218 LINC00614P0C842 121 aa6.61□□□□□ -1.35
PTPRE-207ENST00000471218 LINC00310P59036 64 aa6.61□□□□□ -1.35
PTPRE-207ENST00000471218 LINC00315P59091 139 aa6.61□□□□□ -1.35
PTPRE-207ENST00000471218 Q6ZWC4 215 aa6.61□□□□□ -1.35
PTPRE-207ENST00000471218 FA2HQ7L5A8 372 aa6.61□□□□□ -1.35
PTPRE-207ENST00000471218 C18orf15Q96N68 181 aa6.61□□□□□ -1.35
PTPRE-207ENST00000471218 OVOL2Q9BRP0 275 aa6.61□□□□□ -1.35
PTPRE-207ENST00000471218 SAMD10Q9BYL1 202 aa6.61□□□□□ -1.35
PTPRE-207ENST00000471218 DNAH1Q9P2D7 4330 aa6.61□□□□□ -1.35
PTPRE-207ENST00000471218 IFITM10A6NMD0 228 aa6.6□□□□□ -1.35
PTPRE-207ENST00000471218 SPRY2O43597 315 aa6.6□□□□□ -1.35
PTPRE-207ENST00000471218 TNFRSF6BO95407 300 aa6.6□□□□□ -1.35
PTPRE-207ENST00000471218 FXYD7P58549 80 aa6.6□□□□□ -1.35
PTPRE-207ENST00000471218 RRN3P1Q2M238 152 aa6.6□□□□□ -1.35
PTPRE-207ENST00000471218 NIT1Q86X76 327 aa6.6□□□□□ -1.35
PTPRE-207ENST00000471218 C14orf178Q8N769 122 aaPredicted RBP6.6□□□□□ -1.35
PTPRE-207ENST00000471218 NRACQ8N912 160 aa6.6□□□□□ -1.35
PTPRE-207ENST00000471218 PRSS3P2Q8NHM4 247 aa6.6□□□□□ -1.35
PTPRE-207ENST00000471218 TP53TG1Q9Y2A0 90 aa6.6□□□□□ -1.35
PTPRE-207ENST00000471218 RYR2Q92736 4967 aa6.6□□□□□ -1.35
PTPRE-207ENST00000471218 MUC21A0A0G2JKD1 596 aa6.59□□□□□ -1.35
PTPRE-207ENST00000471218 MUC21A0A140T8X8 626 aa6.59□□□□□ -1.35
PTPRE-207ENST00000471218 TEX48A0A1B0GUV7 120 aa6.59□□□□□ -1.35
PTPRE-207ENST00000471218 NPYP01303 97 aa6.59□□□□□ -1.35
PTPRE-207ENST00000471218 CRYGDP07320 174 aa6.59□□□□□ -1.35
PTPRE-207ENST00000471218 IGHV4-30-4P0DP06 118 aa6.59□□□□□ -1.35
PTPRE-207ENST00000471218 FABP4P15090 132 aa6.59□□□□□ -1.35
PTPRE-207ENST00000471218 RPL35AP18077 110 aaKnown RBP6.59□□□□□ -1.35
PTPRE-207ENST00000471218 AMTP48728 403 aa6.59□□□□□ -1.35
PTPRE-207ENST00000471218 SUMO2P61956 95 aaKnown RBP6.59□□□□□ -1.35
PTPRE-207ENST00000471218 ZFAND6Q6FIF0 208 aa6.59□□□□□ -1.35
PTPRE-207ENST00000471218 UFSP1Q6NVU6 142 aa6.59□□□□□ -1.35
PTPRE-207ENST00000471218 Q8N8P6 123 aa6.59□□□□□ -1.35
PTPRE-207ENST00000471218 LYSTQ99698 3801 aa6.59□□□□□ -1.35
PTPRE-207ENST00000471218 HSPB8Q9UJY1 196 aa6.59□□□□□ -1.35
PTPRE-207ENST00000471218 TIMM8BQ9Y5J9 83 aaPredicted RBP6.59□□□□□ -1.35
PTPRE-207ENST00000471218 AGRNO00468 2067 aa6.58□□□□□ -1.36
PTPRE-207ENST00000471218 TRAV4A0A0B4J268 109 aa6.58□□□□□ -1.36
PTPRE-207ENST00000471218 TRBV10-1A0A0K0K1A3 114 aa6.58□□□□□ -1.36
PTPRE-207ENST00000471218 RS1O15537 224 aa6.58□□□□□ -1.36
PTPRE-207ENST00000471218 ORMDL2Q53FV1 153 aa6.58□□□□□ -1.36
PTPRE-207ENST00000471218 RNASEKQ6P5S7 137 aaKnown RBP6.58□□□□□ -1.36
PTPRE-207ENST00000471218 DNAJC30Q96LL9 226 aa6.58□□□□□ -1.36
PTPRE-207ENST00000471218 SMIM2Q9BVW6 85 aa6.58□□□□□ -1.36
PTPRE-207ENST00000471218 WFDC10AQ9H1F0 79 aa6.58□□□□□ -1.36
PTPRE-207ENST00000471218 IGLV2-18A0A075B6J9 118 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms