RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 IGLV3-19P01714 112 aa5.32□□□□□ -1.56
BRCA1-210ENST00000471181 LINC00269Q8N2A0 174 aa5.32□□□□□ -1.56
BRCA1-210ENST00000471181 MTCL1Q9Y4B5 1905 aaKnown RBP5.32□□□□□ -1.56
BRCA1-210ENST00000471181 NUP214P35658 2090 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-210ENST00000471181 Q6ZS92 163 aa5.32□□□□□ -1.56
BRCA1-210ENST00000471181 KAAG1Q9UBP8 84 aa5.32□□□□□ -1.56
BRCA1-210ENST00000471181 HTTP42858 3142 aa5.32□□□□□ -1.56
BRCA1-210ENST00000471181 UQCRQO14949 82 aa5.32□□□□□ -1.56
BRCA1-210ENST00000471181 UFSP1Q6NVU6 142 aa5.32□□□□□ -1.56
BRCA1-210ENST00000471181 CEMP1Q6PRD7 247 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-210ENST00000471181 XAGE1AQ9HD64 81 aa5.32□□□□□ -1.56
BRCA1-210ENST00000471181 ZFP36P26651 326 aaKnown RBP5.31□□□□□ -1.56
BRCA1-210ENST00000471181 B3GALT5-AS1P59052 145 aa5.31□□□□□ -1.56
BRCA1-210ENST00000471181 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-210ENST00000471181 FLVCR1-AS1Q8TAF5 88 aa5.31□□□□□ -1.56
BRCA1-210ENST00000471181 ZSWIM8A7E2V4 1837 aa5.31□□□□□ -1.56
BRCA1-210ENST00000471181 TDRD6O60522 2096 aaKnown RBP5.31□□□□□ -1.56
BRCA1-210ENST00000471181 ANKRD36A6QL64 1941 aa5.31□□□□□ -1.56
BRCA1-210ENST00000471181 IGHV1-58A0A0C4DH39 117 aa5.31□□□□□ -1.56
BRCA1-210ENST00000471181 C11orf86A6NJI1 115 aa5.31□□□□□ -1.56
BRCA1-210ENST00000471181 TCL1BO95988 128 aa5.31□□□□□ -1.56
BRCA1-210ENST00000471181 LY6G6EA0A0G2JKS1 128 aa5.31□□□□□ -1.56
BRCA1-210ENST00000471181 M0R2N4 97 aa5.31□□□□□ -1.56
BRCA1-210ENST00000471181 SPINK1P00995 79 aa5.31□□□□□ -1.56
BRCA1-210ENST00000471181 TNRC6BQ9UPQ9 1833 aaKnown RBP5.31□□□□□ -1.56
BRCA1-210ENST00000471181 REG3AQ06141 175 aa5.31□□□□□ -1.56
BRCA1-210ENST00000471181 PRSS33Q8NF86 280 aa5.31□□□□□ -1.56
BRCA1-210ENST00000471181 SLX1AQ9BQ83 275 aa5.31□□□□□ -1.56
BRCA1-210ENST00000471181 DEFB113Q30KQ7 82 aa5.3□□□□□ -1.56
BRCA1-210ENST00000471181 CDPF1Q6NVV7 123 aa5.3□□□□□ -1.56
BRCA1-210ENST00000471181 TRIOBPQ9H2D6 2365 aa5.3□□□□□ -1.56
BRCA1-210ENST00000471181 VWCEQ96DN2 955 aa5.3□□□□□ -1.56
BRCA1-210ENST00000471181 CCKP06307 115 aa5.3□□□□□ -1.56
BRCA1-210ENST00000471181 Q6ZR03 302 aa5.3□□□□□ -1.56
BRCA1-210ENST00000471181 IGHV2-5P01817 119 aa5.3□□□□□ -1.56
BRCA1-210ENST00000471181 ATP5EP56381 51 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-210ENST00000471181 LINC00311Q8N616 119 aa5.3□□□□□ -1.56
BRCA1-210ENST00000471181 RNASE8Q8TDE3 154 aaKnown RBP5.3□□□□□ -1.56
BRCA1-210ENST00000471181 ICE1Q9Y2F5 2266 aa5.3□□□□□ -1.56
BRCA1-210ENST00000471181 BRCA2P51587 3418 aa5.3□□□□□ -1.56
BRCA1-210ENST00000471181 K7ENP7 123 aa5.3□□□□□ -1.56
BRCA1-210ENST00000471181 MT-ATP8P03928 68 aa5.3□□□□□ -1.56
BRCA1-210ENST00000471181 MIAQ16674 131 aa5.3□□□□□ -1.56
BRCA1-210ENST00000471181 ZNF706Q9Y5V0 76 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-210ENST00000471181 IGKV2-28A0A075B6P5 120 aa5.29□□□□□ -1.56
BRCA1-210ENST00000471181 IGKV2D-28P01615 120 aa5.29□□□□□ -1.56
BRCA1-210ENST00000471181 PMAIP1Q13794 54 aa5.29□□□□□ -1.56
BRCA1-210ENST00000471181 E9PLD3 99 aa5.29□□□□□ -1.56
BRCA1-210ENST00000471181 NANOS2P60321 138 aaKnown RBP5.29□□□□□ -1.56
BRCA1-210ENST00000471181 WFDC10AQ9H1F0 79 aa5.29□□□□□ -1.56
BRCA1-210ENST00000471181 PCNTO95613 3336 aa5.29□□□□□ -1.56
BRCA1-210ENST00000471181 C2orf70A6NJV1 201 aa5.29□□□□□ -1.56
BRCA1-210ENST00000471181 POM121L12Q8N7R1 296 aa5.29□□□□□ -1.56
BRCA1-210ENST00000471181 LENEPQ9Y5L5 61 aa5.29□□□□□ -1.56
BRCA1-210ENST00000471181 ARHGEF17Q96PE2 2063 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-210ENST00000471181 IGLV2-18A0A075B6J9 118 aa5.29□□□□□ -1.56
BRCA1-210ENST00000471181 IGF2-ASQ6U949 168 aa5.29□□□□□ -1.56
BRCA1-210ENST00000471181 ZFAND2AQ8N6M9 145 aa5.29□□□□□ -1.56
BRCA1-210ENST00000471181 CHCHD10Q8WYQ3 142 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-210ENST00000471181 TMEM223A0PJW6 202 aa5.29□□□□□ -1.56
BRCA1-210ENST00000471181 NDUFA11Q86Y39 141 aa5.29□□□□□ -1.56
BRCA1-210ENST00000471181 C20orf173Q96LM9 149 aa5.29□□□□□ -1.56
BRCA1-210ENST00000471181 PRO0255Q9UI72 69 aa5.28□□□□□ -1.56
BRCA1-210ENST00000471181 TDRD15B5MCY1 1934 aaKnown RBP5.28□□□□□ -1.56
BRCA1-210ENST00000471181 MIFP14174 115 aa5.28□□□□□ -1.56
BRCA1-210ENST00000471181 DEFB1P60022 68 aa5.28□□□□□ -1.56
BRCA1-210ENST00000471181 BLCAPP62952 87 aa5.28□□□□□ -1.56
BRCA1-210ENST00000471181 FAM19A3Q7Z5A8 133 aa5.28□□□□□ -1.56
BRCA1-210ENST00000471181 POLR2AP24928 1970 aaKnown RBP5.28□□□□□ -1.56
BRCA1-210ENST00000471181 ZNF318Q5VUA4 2279 aa5.28□□□□□ -1.56
BRCA1-210ENST00000471181 C15orf65H3BRN8 121 aa5.28□□□□□ -1.56
BRCA1-210ENST00000471181 DOCK5Q9H7D0 1870 aa5.28□□□□□ -1.56
BRCA1-210ENST00000471181 ARID2Q68CP9 1835 aa5.28□□□□□ -1.56
BRCA1-210ENST00000471181 TRBV6-1A0A0K0K1D8 114 aa5.28□□□□□ -1.56
BRCA1-210ENST00000471181 P0DMU3 169 aa5.28□□□□□ -1.56
BRCA1-210ENST00000471181 FAM231AP0DMU4 169 aa5.28□□□□□ -1.56
BRCA1-210ENST00000471181 FAM231CP0DMU5 169 aa5.28□□□□□ -1.56
BRCA1-210ENST00000471181 HILS1P60008 231 aa5.27□□□□□ -1.57
BRCA1-210ENST00000471181 COA6Q5JTJ3 125 aaKnown RBP5.27□□□□□ -1.57
BRCA1-210ENST00000471181 ATP5EP2Q5VTU8 51 aa5.27□□□□□ -1.57
BRCA1-210ENST00000471181 C4orf3Q8WVX3 66 aa5.27□□□□□ -1.57
BRCA1-210ENST00000471181 DNAJC9-AS1A6NH13 148 aa5.27□□□□□ -1.57
BRCA1-210ENST00000471181 PRAC2D3DTV9 90 aa5.27□□□□□ -1.57
BRCA1-210ENST00000471181 DOCK9Q9BZ29 2069 aa5.27□□□□□ -1.57
BRCA1-210ENST00000471181 MYCNOSP40205 109 aa5.27□□□□□ -1.57
BRCA1-210ENST00000471181 ESRGQ1W209 222 aa5.27□□□□□ -1.57
BRCA1-210ENST00000471181 LY6LH3BQJ8 138 aa5.27□□□□□ -1.57
BRCA1-210ENST00000471181 CKAP5Q14008 2032 aa5.27□□□□□ -1.57
BRCA1-210ENST00000471181 TRBV10-1A0A0K0K1A3 114 aa5.27□□□□□ -1.57
BRCA1-210ENST00000471181 LYRM9A8MSI8 78 aa5.27□□□□□ -1.57
BRCA1-210ENST00000471181 FANCMQ8IYD8 2048 aa5.27□□□□□ -1.57
BRCA1-210ENST00000471181 CEP290O15078 2479 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 MDFICQ9P1T7 246 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 HIGD1BQ9P298 99 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 GBF1Q92538 1859 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 ARFGEF3Q5TH69 2177 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 DEFB131BA0A096LNP1 70 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 C22orf34Q6ZV56 151 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 NRGNQ92686 78 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 RITA1Q96K30 269 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms