RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 SUMO2P61956 95 aaKnown RBP12.49□□□□□ -0.41
SMARCD3-206ENST00000470588 NSUN5P1Q3KNT7 163 aa12.49□□□□□ -0.41
SMARCD3-206ENST00000470588 NDUFA11Q86Y39 141 aa12.49□□□□□ -0.41
SMARCD3-206ENST00000470588 CLUHP3Q96NS8 147 aa12.49□□□□□ -0.41
SMARCD3-206ENST00000470588 ZNF256Q9Y2P7 627 aaPredicted RBP12.49□□□□□ -0.41
SMARCD3-206ENST00000470588 GOLT1BQ9Y3E0 138 aa12.48□□□□□ -0.41
SMARCD3-206ENST00000470588 FLNBO75369 2602 aaKnown RBP12.48□□□□□ -0.41
SMARCD3-206ENST00000470588 MUC4Q99102 2169 aa12.48□□□□□ -0.41
SMARCD3-206ENST00000470588 ATP5LO75964 103 aa12.48□□□□□ -0.41
SMARCD3-206ENST00000470588 HNRNPA3P51991 378 aaKnown RBP12.48□□□□□ -0.41
SMARCD3-206ENST00000470588 PMCHL2Q9BQD1 86 aa12.48□□□□□ -0.41
SMARCD3-206ENST00000470588 MRPS16Q9Y3D3 137 aaKnown RBP12.48□□□□□ -0.41
SMARCD3-206ENST00000470588 EREGO14944 169 aa12.47□□□□□ -0.41
SMARCD3-206ENST00000470588 RPL32P62910 135 aaKnown RBP12.47□□□□□ -0.41
SMARCD3-206ENST00000470588 ORMDL2Q53FV1 153 aa12.47□□□□□ -0.41
SMARCD3-206ENST00000470588 AGRNO00468 2067 aa12.47□□□□□ -0.41
SMARCD3-206ENST00000470588 RBMY1BA6NDE4 496 aaKnown RBP12.46□□□□□ -0.41
SMARCD3-206ENST00000470588 RBMY1EA6NEQ0 496 aaKnown RBP12.46□□□□□ -0.41
SMARCD3-206ENST00000470588 TCAPO15273 167 aa12.46□□□□□ -0.41
SMARCD3-206ENST00000470588 RBMY1DP0C7P1 496 aaKnown RBP12.46□□□□□ -0.41
SMARCD3-206ENST00000470588 RPL39LQ96EH5 51 aaKnown RBP12.46□□□□□ -0.41
SMARCD3-206ENST00000470588 CMC4P56277 68 aaPredicted RBP12.46□□□□□ -0.42
SMARCD3-206ENST00000470588 C18orf15Q96N68 181 aa12.46□□□□□ -0.42
SMARCD3-206ENST00000470588 JPT2Q9H910 190 aa12.46□□□□□ -0.42
SMARCD3-206ENST00000470588 NF1P21359 2839 aa12.45□□□□□ -0.42
SMARCD3-206ENST00000470588 BAHCC1Q9P281 2608 aa12.45□□□□□ -0.42
SMARCD3-206ENST00000470588 CBY3A6NI87 242 aa12.45□□□□□ -0.42
SMARCD3-206ENST00000470588 ZNF124Q15973 351 aa12.45□□□□□ -0.42
SMARCD3-206ENST00000470588 LINC00467Q9BRT7 94 aa12.45□□□□□ -0.42
SMARCD3-206ENST00000470588 FN1P02751 2386 aaKnown RBP12.45□□□□□ -0.42
SMARCD3-206ENST00000470588 SORL1Q92673 2214 aa12.44□□□□□ -0.42
SMARCD3-206ENST00000470588 NUDT3O95989 172 aa12.44□□□□□ -0.42
SMARCD3-206ENST00000470588 PRSS1P07477 247 aa12.44□□□□□ -0.42
SMARCD3-206ENST00000470588 RBMY1A1P0DJD3 496 aaKnown RBP12.44□□□□□ -0.42
SMARCD3-206ENST00000470588 RBMY1CP0DJD4 496 aa12.44□□□□□ -0.42
SMARCD3-206ENST00000470588 RBMY1FQ15415 496 aaKnown RBP12.44□□□□□ -0.42
SMARCD3-206ENST00000470588 LURAP1LQ8IV03 231 aa12.44□□□□□ -0.42
SMARCD3-206ENST00000470588 A0A087WWL8 130 aa12.43□□□□□ -0.42
SMARCD3-206ENST00000470588 ADARB2-AS1A8MUL3 147 aa12.43□□□□□ -0.42
SMARCD3-206ENST00000470588 SUMO4Q6EEV6 95 aa12.43□□□□□ -0.42
SMARCD3-206ENST00000470588 F5H697 171 aa12.43□□□□□ -0.42
SMARCD3-206ENST00000470588 PF4P02776 101 aa12.43□□□□□ -0.42
SMARCD3-206ENST00000470588 CRYGDP07320 174 aa12.43□□□□□ -0.42
SMARCD3-206ENST00000470588 SLC25A34Q6PIV7 304 aa12.43□□□□□ -0.42
SMARCD3-206ENST00000470588 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.43□□□□□ -0.42
SMARCD3-206ENST00000470588 CSTL1Q9H114 145 aa12.43□□□□□ -0.42
SMARCD3-206ENST00000470588 G0S2P27469 103 aa12.42□□□□□ -0.42
SMARCD3-206ENST00000470588 PTH2Q96A98 100 aa12.42□□□□□ -0.42
SMARCD3-206ENST00000470588 ZMAT4Q9H898 229 aa12.42□□□□□ -0.42
SMARCD3-206ENST00000470588 CUBNO60494 3623 aa12.42□□□□□ -0.42
SMARCD3-206ENST00000470588 TRBV6-5A0A0K0K1A5 114 aa12.41□□□□□ -0.42
SMARCD3-206ENST00000470588 VCYO14598 125 aa12.41□□□□□ -0.42
SMARCD3-206ENST00000470588 POLR2KP53803 58 aaKnown RBP12.41□□□□□ -0.42
SMARCD3-206ENST00000470588 KRTAP10-3P60369 221 aa12.41□□□□□ -0.42
SMARCD3-206ENST00000470588 ODF3L2Q3SX64 289 aa12.41□□□□□ -0.42
SMARCD3-206ENST00000470588 ZNF876PQ49A33 203 aa12.41□□□□□ -0.42
SMARCD3-206ENST00000470588 PIK3CD-AS1Q5SR53 167 aa12.41□□□□□ -0.42
SMARCD3-206ENST00000470588 TOMM6Q96B49 74 aa12.41□□□□□ -0.42
SMARCD3-206ENST00000470588 A0A1B0GV90 55 aa12.41□□□□□ -0.42
SMARCD3-206ENST00000470588 OR11H12B2RN74 326 aa12.41□□□□□ -0.42
SMARCD3-206ENST00000470588 SAP30O75446 220 aa12.41□□□□□ -0.42
SMARCD3-206ENST00000470588 ODF1Q14990 250 aa12.41□□□□□ -0.42
SMARCD3-206ENST00000470588 DKK2Q9UBU2 259 aa12.41□□□□□ -0.42
SMARCD3-206ENST00000470588 F8P00451 2351 aa12.4□□□□□ -0.42
SMARCD3-206ENST00000470588 SETXQ7Z333 2677 aaKnown RBP12.4□□□□□ -0.42
SMARCD3-206ENST00000470588 COX8AP10176 69 aa12.4□□□□□ -0.42
SMARCD3-206ENST00000470588 STHQ8IWL8 128 aa12.4□□□□□ -0.42
SMARCD3-206ENST00000470588 LINC01549A6NIU2 74 aa12.39□□□□□ -0.43
SMARCD3-206ENST00000470588 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.39□□□□□ -0.43
SMARCD3-206ENST00000470588 INSP01308 110 aa12.39□□□□□ -0.43
SMARCD3-206ENST00000470588 ZNF415Q09FC8 603 aa12.39□□□□□ -0.43
SMARCD3-206ENST00000470588 LINC01587Q99440 93 aa12.39□□□□□ -0.43
SMARCD3-206ENST00000470588 M0QY20 66 aa12.38□□□□□ -0.43
SMARCD3-206ENST00000470588 M0R2P5 195 aa12.38□□□□□ -0.43
SMARCD3-206ENST00000470588 FAM74A4Q5TZK3 123 aa12.38□□□□□ -0.43
SMARCD3-206ENST00000470588 SCGB3A1Q96QR1 104 aa12.38□□□□□ -0.43
SMARCD3-206ENST00000470588 HTN1P15515 57 aa12.38□□□□□ -0.43
SMARCD3-206ENST00000470588 NUTF2P61970 127 aaKnown RBP12.38□□□□□ -0.43
SMARCD3-206ENST00000470588 ZNF56Q15929 161 aa12.38□□□□□ -0.43
SMARCD3-206ENST00000470588 TRPT1Q86TN4 253 aaKnown RBP12.38□□□□□ -0.43
SMARCD3-206ENST00000470588 A0A087WX48 190 aa12.37□□□□□ -0.43
SMARCD3-206ENST00000470588 TRAV12-1A0A0B4J245 112 aa12.37□□□□□ -0.43
SMARCD3-206ENST00000470588 ANKRD39Q53RE8 183 aa12.37□□□□□ -0.43
SMARCD3-206ENST00000470588 FAM110AQ9BQ89 295 aa12.37□□□□□ -0.43
SMARCD3-206ENST00000470588 SPXQ9BT56 116 aa12.37□□□□□ -0.43
SMARCD3-206ENST00000470588 DPM2O94777 84 aa12.36□□□□□ -0.43
SMARCD3-206ENST00000470588 IGLV1-51P01701 117 aa12.36□□□□□ -0.43
SMARCD3-206ENST00000470588 IGKCP01834 107 aa12.36□□□□□ -0.43
SMARCD3-206ENST00000470588 BATFQ16520 125 aa12.36□□□□□ -0.43
SMARCD3-206ENST00000470588 COL5A1-AS1Q5SY13 56 aa12.36□□□□□ -0.43
SMARCD3-206ENST00000470588 C2orf66Q6UXQ4 117 aa12.36□□□□□ -0.43
SMARCD3-206ENST00000470588 STPG4Q8N801 248 aa12.36□□□□□ -0.43
SMARCD3-206ENST00000470588 KIR2DL4Q99706 377 aa12.36□□□□□ -0.43
SMARCD3-206ENST00000470588 TRBV27A0A0K0K1C4 114 aa12.35□□□□□ -0.43
SMARCD3-206ENST00000470588 SDHAF1A6NFY7 115 aa12.35□□□□□ -0.43
SMARCD3-206ENST00000470588 A8MWV9 139 aa12.35□□□□□ -0.43
SMARCD3-206ENST00000470588 EDA2RQ9HAV5 297 aa12.35□□□□□ -0.43
SMARCD3-206ENST00000470588 ERASQ7Z444 233 aa12.35□□□□□ -0.43
SMARCD3-206ENST00000470588 HHLA3Q9XRX5 114 aa12.35□□□□□ -0.43
SMARCD3-206ENST00000470588 C2CD3Q4AC94 2353 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms