RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 Q6AWC8 147 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 GTF2H5Q6ZYL4 71 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 ATP6V0E2Q8NHE4 81 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 TSLPQ969D9 159 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 LINC01600Q96MT4 127 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 SLC35B3Q9H1N7 401 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 PRO1933Q9H354 126 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 NPVFQ9HCQ7 196 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 FKBP11Q9NYL4 201 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 BET1LQ9NYM9 111 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 ORMDL1Q9P0S3 153 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 RABAC1Q9UI14 185 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 PPLO60437 1756 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 BCORL1Q5H9F3 1711 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 MYO5CQ9NQX4 1742 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 ABCC3O15438 1527 aa1.2□□□□□ -2.22
BRCA2-202ENST00000470094 PARP14Q460N5 1801 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 TNRC6AQ8NDV7 1962 aaKnown RBP1.19□□□□□ -2.22
BRCA2-202ENST00000470094 CASP8AP2Q9UKL3 1982 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 IGKV2-40A0A087WW87 121 aaPredicted RBP1.19□□□□□ -2.22
BRCA2-202ENST00000470094 LOC110117498A0A087WWA1 95 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 TRBV6-4A0A1B0GX49 114 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 ZNF670-ZNF695F2Z2N8 137 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 F8W1H4 67 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 CCDC179H3BU77 68 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 INE1O15225 51 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 IGKV2D-40P01614 121 aaPredicted RBP1.19□□□□□ -2.22
BRCA2-202ENST00000470094 APOC3P02656 99 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 CD2P06729 351 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 SPINK8P0C7L1 97 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 COX7CP15954 63 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 TPPP2P59282 170 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 UBA52P62987 128 aaKnown RBP1.19□□□□□ -2.22
BRCA2-202ENST00000470094 LINC01545Q5VT33 79 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 MRPL54Q6P161 138 aaKnown RBP1.19□□□□□ -2.22
BRCA2-202ENST00000470094 IZUMO2Q6UXV1 221 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 HEPN1Q6WQI6 88 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 ZCCHC23Q6ZST2 131 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 SLC25A26Q70HW3 274 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 ZNF720Q7Z2F6 126 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 OTOSQ8NHW6 89 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 C10orf82Q8WW14 230 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 AQP10Q96PS8 301 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 CIB3Q96Q77 187 aaPredicted RBP1.19□□□□□ -2.22
BRCA2-202ENST00000470094 HELZ2Q9BYK8 2649 aaKnown RBP1.19□□□□□ -2.22
BRCA2-202ENST00000470094 SCN3AQ9NY46 2000 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 MED12LQ86YW9 2145 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 MCM3APO60318 1980 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 SBF2Q86WG5 1849 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 CTTNBP2Q8WZ74 1663 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 QRICH2Q9H0J4 1663 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 MAGI3Q5TCQ9 1506 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 UGGT2Q9NYU1 1516 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 PLIN4Q96Q06 1357 aa1.19□□□□□ -2.22
BRCA2-202ENST00000470094 IQSEC2Q5JU85 1478 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 LRRIQ1Q96JM4 1722 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 ABCA3Q99758 1704 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 ANKRD50Q9ULJ7 1429 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 TRAV12-2A0A075B6T6 113 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 A0A087WWC5 75 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 NUPR1O60356 82 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 CFDP00746 253 aaPredicted RBP1.18□□□□□ -2.22
BRCA2-202ENST00000470094 IFITM1P13164 125 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 GUCA1AP43080 201 aaPredicted RBP1.18□□□□□ -2.22
BRCA2-202ENST00000470094 MIR22HGQ0VDD5 57 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 CASC2Q6XLA1 102 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 Q6ZSA8 131 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 MYOZ3Q8TDC0 251 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 C10orf105Q8TEF2 133 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 AGPAT4-IT1Q9H0P7 198 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 TMEM242Q9NWH2 141 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 COMMD3Q9UBI1 195 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 CUL7Q14999 1698 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 TOP2AP11388 1531 aaKnown RBP1.18□□□□□ -2.22
BRCA2-202ENST00000470094 DUOX2Q9NRD8 1548 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 ALPK2Q86TB3 2170 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 RBBP6Q7Z6E9 1792 aaKnown RBP1.18□□□□□ -2.22
BRCA2-202ENST00000470094 PTPN23Q9H3S7 1636 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 FREM3P0C091 2139 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 ATP10BO94823 1461 aa1.18□□□□□ -2.22
BRCA2-202ENST00000470094 KIF13AQ9H1H9 1805 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 ANKARQ7Z5J8 1434 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 TRBV20-1A0A075B6N2 111 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 H3BRM9 83 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 SNRNP200O75643 2136 aaKnown RBP1.17□□□□□ -2.22
BRCA2-202ENST00000470094 KLF7O75840 302 aaPredicted RBP1.17□□□□□ -2.22
BRCA2-202ENST00000470094 IGLC2P0DOY2 106 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 IGLC3P0DOY3 106 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 PYYP10082 97 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 CKS2P33552 79 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 ASIPP42127 132 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 S100A10P60903 97 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 PCBD1P61457 104 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 CATR1Q13166 79 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 Q56UQ5 140 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 OR2T2Q6IF00 324 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 ALKAL2Q6UX46 152 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 Q6ZUT4 128 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 ATG5Q9H1Y0 275 aa1.17□□□□□ -2.22
BRCA2-202ENST00000470094 NAA60Q9H7X0 242 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms