RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 EDA2RQ9HAV5 297 aa5.82□□□□□ -1.48
NPHP3-204ENST00000469232 TIMM8BQ9Y5J9 83 aaPredicted RBP5.82□□□□□ -1.48
NPHP3-204ENST00000469232 IGHV3OR16-12A0A075B7B8 117 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 RS1O15537 224 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 HLA-DQA1P01909 254 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 CRYGDP07320 174 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 TRGC1P0CF51 173 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 ZNF876PQ49A33 203 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 FAM104BQ5XKR9 115 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 MRPL54Q6P161 138 aaKnown RBP5.81□□□□□ -1.48
NPHP3-204ENST00000469232 SYT8Q8NBV8 401 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 BORCS7Q96B45 105 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 A8MWV9 139 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 SNURFLB1AK76 121 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 CIDEAO60543 219 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 SPANXN1Q5VSR9 72 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 ZFP2Q6ZN57 461 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 RNF185Q96GF1 192 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 AP1S3Q96PC3 154 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 DKK2Q9UBU2 259 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 U3KQK5 164 aa5.81□□□□□ -1.48
NPHP3-204ENST00000469232 PRKDCP78527 4128 aaKnown RBP5.81□□□□□ -1.48
NPHP3-204ENST00000469232 COL7A1Q02388 2944 aa5.8□□□□□ -1.48
NPHP3-204ENST00000469232 NACAE9PAV3 2078 aa5.8□□□□□ -1.48
NPHP3-204ENST00000469232 M0R381 172 aa5.8□□□□□ -1.48
NPHP3-204ENST00000469232 HTN1P15515 57 aa5.8□□□□□ -1.48
NPHP3-204ENST00000469232 TWIST1Q15672 202 aa5.8□□□□□ -1.48
NPHP3-204ENST00000469232 CFAP126Q5VTH2 177 aa5.8□□□□□ -1.48
NPHP3-204ENST00000469232 Q6ZTI0 123 aa5.8□□□□□ -1.48
NPHP3-204ENST00000469232 MRAPQ8TCY5 172 aa5.8□□□□□ -1.48
NPHP3-204ENST00000469232 TPPP3Q9BW30 176 aa5.8□□□□□ -1.48
NPHP3-204ENST00000469232 NOP10Q9NPE3 64 aaKnown RBP5.8□□□□□ -1.48
NPHP3-204ENST00000469232 TRAV4A0A0B4J268 109 aa5.79□□□□□ -1.48
NPHP3-204ENST00000469232 MUC21A0A0G2JKD1 596 aa5.79□□□□□ -1.48
NPHP3-204ENST00000469232 MUC21A0A140T8X8 626 aa5.79□□□□□ -1.48
NPHP3-204ENST00000469232 TEX48A0A1B0GUV7 120 aa5.79□□□□□ -1.48
NPHP3-204ENST00000469232 RHODO00212 210 aa5.79□□□□□ -1.48
NPHP3-204ENST00000469232 NHLRC4P0CG21 123 aaPredicted RBP5.79□□□□□ -1.48
NPHP3-204ENST00000469232 RAB4AP20338 218 aa5.79□□□□□ -1.48
NPHP3-204ENST00000469232 EVI2AP22794 236 aa5.79□□□□□ -1.48
NPHP3-204ENST00000469232 SLAQ13239 276 aa5.79□□□□□ -1.48
NPHP3-204ENST00000469232 DPH3P1Q9H4G8 78 aa5.79□□□□□ -1.48
NPHP3-204ENST00000469232 RETNQ9HD89 108 aa5.79□□□□□ -1.48
NPHP3-204ENST00000469232 FBN3Q75N90 2809 aa5.78□□□□□ -1.48
NPHP3-204ENST00000469232 PPBPP02775 128 aa5.78□□□□□ -1.48
NPHP3-204ENST00000469232 CAMPP49913 170 aa5.78□□□□□ -1.48
NPHP3-204ENST00000469232 DEFB121Q5J5C9 76 aa5.78□□□□□ -1.48
NPHP3-204ENST00000469232 SAMD10Q9BYL1 202 aa5.78□□□□□ -1.48
NPHP3-204ENST00000469232 JPT2Q9H910 190 aa5.78□□□□□ -1.48
NPHP3-204ENST00000469232 MRPL16Q9NX20 251 aaKnown RBP5.78□□□□□ -1.48
NPHP3-204ENST00000469232 TRGV1A0A0A0MS02 117 aa5.77□□□□□ -1.48
NPHP3-204ENST00000469232 PRSS47A8MTI9 375 aa5.77□□□□□ -1.48
NPHP3-204ENST00000469232 DEFA6Q01524 100 aa5.77□□□□□ -1.48
NPHP3-204ENST00000469232 MRPL51Q4U2R6 128 aaKnown RBP5.77□□□□□ -1.48
NPHP3-204ENST00000469232 FAM222AQ5U5X8 452 aa5.77□□□□□ -1.48
NPHP3-204ENST00000469232 SMIM15Q7Z3B0 74 aa5.77□□□□□ -1.48
NPHP3-204ENST00000469232 AMN1Q8IY45 258 aa5.77□□□□□ -1.48
NPHP3-204ENST00000469232 C14orf178Q8N769 122 aaPredicted RBP5.77□□□□□ -1.48
NPHP3-204ENST00000469232 MRAP2Q96G30 205 aa5.77□□□□□ -1.48
NPHP3-204ENST00000469232 IGHV3-53P01767 116 aa5.77□□□□□ -1.49
NPHP3-204ENST00000469232 APCSP02743 223 aa5.77□□□□□ -1.49
NPHP3-204ENST00000469232 TRGC2P03986 189 aa5.77□□□□□ -1.49
NPHP3-204ENST00000469232 SPART-AS1P0CW21 52 aa5.77□□□□□ -1.49
NPHP3-204ENST00000469232 RPS10P46783 165 aaKnown RBP5.77□□□□□ -1.49
NPHP3-204ENST00000469232 RAB4BP61018 213 aa5.77□□□□□ -1.49
NPHP3-204ENST00000469232 NRACQ8N912 160 aa5.77□□□□□ -1.49
NPHP3-204ENST00000469232 ALKBH7Q9BT30 221 aaPredicted RBP5.77□□□□□ -1.49
NPHP3-204ENST00000469232 CELA1Q9UNI1 258 aa5.77□□□□□ -1.49
NPHP3-204ENST00000469232 LAMTOR2Q9Y2Q5 125 aa5.77□□□□□ -1.49
NPHP3-204ENST00000469232 TRAPPC1Q9Y5R8 145 aa5.77□□□□□ -1.49
NPHP3-204ENST00000469232 STAB2Q8WWQ8 2551 aa5.77□□□□□ -1.49
NPHP3-204ENST00000469232 TRBV6-5A0A0K0K1A5 114 aa5.76□□□□□ -1.49
NPHP3-204ENST00000469232 M0QY20 66 aa5.76□□□□□ -1.49
NPHP3-204ENST00000469232 GATA1P15976 413 aaPredicted RBP5.76□□□□□ -1.49
NPHP3-204ENST00000469232 RPL32P62910 135 aaKnown RBP5.76□□□□□ -1.49
NPHP3-204ENST00000469232 FABP9Q0Z7S8 132 aa5.76□□□□□ -1.49
NPHP3-204ENST00000469232 FHL2Q14192 279 aa5.76□□□□□ -1.49
NPHP3-204ENST00000469232 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
NPHP3-204ENST00000469232 TRBV6-4A0A1B0GX49 114 aa5.75□□□□□ -1.49
NPHP3-204ENST00000469232 GAGE12BA1L429 117 aa5.75□□□□□ -1.49
NPHP3-204ENST00000469232 GAGE7O76087 117 aa5.75□□□□□ -1.49
NPHP3-204ENST00000469232 GAGE12FP0CL80 117 aa5.75□□□□□ -1.49
NPHP3-204ENST00000469232 GAGE12GP0CL81 117 aa5.75□□□□□ -1.49
NPHP3-204ENST00000469232 GAGE12IP0CL82 117 aa5.75□□□□□ -1.49
NPHP3-204ENST00000469232 C12orf74Q32Q52 190 aa5.75□□□□□ -1.49
NPHP3-204ENST00000469232 COA6Q5JTJ3 125 aaKnown RBP5.75□□□□□ -1.49
NPHP3-204ENST00000469232 Q6ZSN1 163 aa5.75□□□□□ -1.49
NPHP3-204ENST00000469232 OR4C5Q8NGB2 326 aa5.75□□□□□ -1.49
NPHP3-204ENST00000469232 ZNF479Q96JC4 524 aa5.75□□□□□ -1.49
NPHP3-204ENST00000469232 ZMAT4Q9H898 229 aa5.75□□□□□ -1.49
NPHP3-204ENST00000469232 A0A087WWL8 130 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 A0A0J9YWU9 116 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 TRBV10-1A0A0K0K1A3 114 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 LINC01546A6NGU7 62 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 DEFB4AO15263 64 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 HIST1H2BKO60814 126 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 PPP1R17O96001 155 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 HIST1H2BJP06899 126 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 SMIM17P0DL12 118 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 LINC00694P0DN24 101 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms