RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 CHD7Q9P2D1 2997 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 CACNA1DQ01668 2161 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 TRBV7-1A0A0A6YYK4 115 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 IGHV1OR15-9A0A0B4J2B8 117 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 IGHV3-20A0A0C4DH32 117 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 KNCNA6PVL3 124 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 SMKR1H3BMG3 65 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 NTN3O00634 580 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-207ENST00000468925 SCRG1O75711 98 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 IGHV4-39P01824 125 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 CCL3P10147 92 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 RPL27AP46776 148 aaKnown RBP3.68□□□□□ -1.82
SF3B1-207ENST00000468925 LYZP61626 148 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 CFHR3Q02985 330 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 WT1-ASQ06250 92 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 C17orf58Q2M2W7 97 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 C1orf195Q5TG92 126 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 HRCT1Q6UXD1 115 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 EXOC3-AS1Q8N2X6 119 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 CD177Q8N6Q3 437 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 IMMP1LQ96LU5 166 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 TIMM21Q9BVV7 248 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 PROK2Q9HC23 129 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 TP53TG1Q9Y2A0 90 aa3.68□□□□□ -1.82
SF3B1-207ENST00000468925 ACACBO00763 2458 aa3.67□□□□□ -1.82
SF3B1-207ENST00000468925 GPR179Q6PRD1 2367 aa3.67□□□□□ -1.82
SF3B1-207ENST00000468925 DMXL1Q9Y485 3027 aa3.67□□□□□ -1.82
SF3B1-207ENST00000468925 FAM236DA0A1B0GTK5 79 aa3.67□□□□□ -1.82
SF3B1-207ENST00000468925 BUB3O43684 328 aa3.67□□□□□ -1.82
SF3B1-207ENST00000468925 IGHV4-34P06331 123 aa3.67□□□□□ -1.82
SF3B1-207ENST00000468925 FAM236CP0DP71 79 aa3.67□□□□□ -1.82
SF3B1-207ENST00000468925 ZNF22P17026 224 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-207ENST00000468925 CRIP2P52943 208 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-207ENST00000468925 FXYD7P58549 80 aa3.67□□□□□ -1.82
SF3B1-207ENST00000468925 CIRBPQ14011 172 aaKnown RBP3.67□□□□□ -1.82
SF3B1-207ENST00000468925 RHOHQ15669 191 aa3.67□□□□□ -1.82
SF3B1-207ENST00000468925 ZNF876PQ49A33 203 aa3.67□□□□□ -1.82
SF3B1-207ENST00000468925 SPANXN1Q5VSR9 72 aa3.67□□□□□ -1.82
SF3B1-207ENST00000468925 C1orf158Q8N1D5 194 aa3.67□□□□□ -1.82
SF3B1-207ENST00000468925 TMEM86BQ8N661 226 aa3.67□□□□□ -1.82
SF3B1-207ENST00000468925 KLF14Q8TD94 323 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-207ENST00000468925 UPK3BQ9BT76 320 aa3.67□□□□□ -1.82
SF3B1-207ENST00000468925 TRIOO75962 3097 aa3.67□□□□□ -1.82
SF3B1-207ENST00000468925 IGHV4OR15-8A0A075B7B6 117 aa3.66□□□□□ -1.82
SF3B1-207ENST00000468925 A0A087WW49 117 aa3.66□□□□□ -1.82
SF3B1-207ENST00000468925 PCNX2A6NKB5 2137 aa3.66□□□□□ -1.82
SF3B1-207ENST00000468925 LY6LH3BQJ8 138 aa3.66□□□□□ -1.82
SF3B1-207ENST00000468925 COX7A2LO14548 114 aa3.66□□□□□ -1.82
SF3B1-207ENST00000468925 ZFP36P26651 326 aaKnown RBP3.66□□□□□ -1.82
SF3B1-207ENST00000468925 LINC00205P59089 165 aa3.66□□□□□ -1.82
SF3B1-207ENST00000468925 C4orf26Q17RF5 130 aa3.66□□□□□ -1.82
SF3B1-207ENST00000468925 FAM53AQ6NSI3 398 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-207ENST00000468925 SFTA2Q6UW10 78 aa3.66□□□□□ -1.82
SF3B1-207ENST00000468925 MUSTN1Q8IVN3 82 aa3.66□□□□□ -1.82
SF3B1-207ENST00000468925 RNF182Q8N6D2 247 aa3.66□□□□□ -1.82
SF3B1-207ENST00000468925 USP24Q9UPU5 2620 aa3.66□□□□□ -1.82
SF3B1-207ENST00000468925 RAI1Q7Z5J4 1906 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-207ENST00000468925 MYO7AQ13402 2215 aa3.66□□□□□ -1.82
SF3B1-207ENST00000468925 ASH1LQ9NR48 2969 aaKnown RBP3.66□□□□□ -1.82
SF3B1-207ENST00000468925 VPS13AQ96RL7 3174 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 IGLV4-69A0A075B6H9 119 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 IGKV1D-17A0A075B6S4 117 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 RBMY1BA6NDE4 496 aaKnown RBP3.65□□□□□ -1.83
SF3B1-207ENST00000468925 RBMY1EA6NEQ0 496 aaKnown RBP3.65□□□□□ -1.83
SF3B1-207ENST00000468925 IGIPA6NJ69 53 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 LINC01548A6NM66 108 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 DNAL4O96015 105 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 LHBP01229 141 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 IGKV1-16P04430 117 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 RBMY1DP0C7P1 496 aaKnown RBP3.65□□□□□ -1.83
SF3B1-207ENST00000468925 RBMY1A1P0DJD3 496 aaKnown RBP3.65□□□□□ -1.83
SF3B1-207ENST00000468925 RBMY1CP0DJD4 496 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 CCL5P13501 91 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 DEFB103AP81534 67 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 RBMY1FQ15415 496 aaKnown RBP3.65□□□□□ -1.83
SF3B1-207ENST00000468925 MIAQ16674 131 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 ASPHD1Q5U4P2 390 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 ZNF826PQ6ZT77 177 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 SLC25A45Q8N413 288 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 ZNF491Q8N8L2 437 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 FAM19A4Q96LR4 140 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 AMELXQ99217 191 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 SLC25A15Q9Y619 301 aa3.65□□□□□ -1.83
SF3B1-207ENST00000468925 TRBV6-5A0A0K0K1A5 114 aa3.64□□□□□ -1.83
SF3B1-207ENST00000468925 I3L2K1 104 aa3.64□□□□□ -1.83
SF3B1-207ENST00000468925 NBR2O15453 112 aa3.64□□□□□ -1.83
SF3B1-207ENST00000468925 IGKV3-15P01624 115 aa3.64□□□□□ -1.83
SF3B1-207ENST00000468925 IGLV2-23P01705 113 aa3.64□□□□□ -1.83
SF3B1-207ENST00000468925 ZNF80P51504 273 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-207ENST00000468925 DAZ2Q13117 558 aaKnown RBP3.64□□□□□ -1.83
SF3B1-207ENST00000468925 CEMP1Q6PRD7 247 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-207ENST00000468925 TMEM61Q8N0U2 210 aa3.64□□□□□ -1.83
SF3B1-207ENST00000468925 KLHL30-AS1Q8NEE0 82 aa3.64□□□□□ -1.83
SF3B1-207ENST00000468925 DCTN5Q9BTE1 182 aa3.64□□□□□ -1.83
SF3B1-207ENST00000468925 TMEM243Q9BU79 118 aa3.64□□□□□ -1.83
SF3B1-207ENST00000468925 Q9H8V8 135 aa3.64□□□□□ -1.83
SF3B1-207ENST00000468925 RNF7Q9UBF6 113 aa3.64□□□□□ -1.83
SF3B1-207ENST00000468925 MAP1BP46821 2468 aaKnown RBP3.64□□□□□ -1.83
SF3B1-207ENST00000468925 GCN1Q92616 2671 aaKnown RBP3.64□□□□□ -1.83
SF3B1-207ENST00000468925 ZFYVE26Q68DK2 2539 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms