RNA–Protein interactions for RNA: ENST00000468654.1

SHANK1-206, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 668 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-206ENST00000468654 HAMPP81172 84 aa14.03□□□□□ -0.16
SHANK1-206ENST00000468654 ZNF674Q2M3X9 581 aa14.03□□□□□ -0.16
SHANK1-206ENST00000468654 LINC01559Q495D7 138 aa14.03□□□□□ -0.16
SHANK1-206ENST00000468654 STOML3Q8TAV4 291 aa14.03□□□□□ -0.16
SHANK1-206ENST00000468654 FRZBQ92765 325 aa14.03□□□□□ -0.16
SHANK1-206ENST00000468654 TMEM70Q9BUB7 260 aa14.03□□□□□ -0.16
SHANK1-206ENST00000468654 TM2D2Q9BX73 214 aa14.03□□□□□ -0.16
SHANK1-206ENST00000468654 A0A087WWC5 75 aa14.02□□□□□ -0.17
SHANK1-206ENST00000468654 SMLR1H3BR10 107 aa14.02□□□□□ -0.17
SHANK1-206ENST00000468654 CST9LP1Q5W188 147 aa14.02□□□□□ -0.17
SHANK1-206ENST00000468654 AKR1C3P42330 323 aa14.01□□□□□ -0.17
SHANK1-206ENST00000468654 ZNF345Q14585 488 aa14.01□□□□□ -0.17
SHANK1-206ENST00000468654 FAM74A4Q5TZK3 123 aa14.01□□□□□ -0.17
SHANK1-206ENST00000468654 SFRP2Q96HF1 295 aa14.01□□□□□ -0.17
SHANK1-206ENST00000468654 PHLDA3Q9Y5J5 127 aa14.01□□□□□ -0.17
SHANK1-206ENST00000468654 TRAV8-3A0A0A6YYJ7 113 aa14□□□□□ -0.17
SHANK1-206ENST00000468654 TPT1P13693 172 aaKnown RBP14□□□□□ -0.17
SHANK1-206ENST00000468654 DAZ4Q86SG3 579 aaKnown RBP14□□□□□ -0.17
SHANK1-206ENST00000468654 KCNRGQ8N5I3 272 aa14□□□□□ -0.17
SHANK1-206ENST00000468654 DAZ3Q9NR90 486 aaKnown RBP14□□□□□ -0.17
SHANK1-206ENST00000468654 A0A087WWL8 130 aa13.99□□□□□ -0.17
SHANK1-206ENST00000468654 TMSB15BA0A087X1C1 80 aa13.99□□□□□ -0.17
SHANK1-206ENST00000468654 WFDC2Q14508 124 aa13.99□□□□□ -0.17
SHANK1-206ENST00000468654 ZFP82Q8N141 532 aa13.99□□□□□ -0.17
SHANK1-206ENST00000468654 M0R381 172 aa13.98□□□□□ -0.17
SHANK1-206ENST00000468654 PAGE4O60829 102 aa13.98□□□□□ -0.17
SHANK1-206ENST00000468654 SMR3BP02814 79 aaPredicted RBP13.98□□□□□ -0.17
SHANK1-206ENST00000468654 SEC11BP0C7V7 166 aa13.98□□□□□ -0.17
SHANK1-206ENST00000468654 TOR2AQ5JU69 321 aa13.98□□□□□ -0.17
SHANK1-206ENST00000468654 MBD3L1Q8WWY6 194 aa13.97□□□□□ -0.17
SHANK1-206ENST00000468654 UMAD1C9J7I0 102 aa13.96□□□□□ -0.17
SHANK1-206ENST00000468654 NIT1Q86X76 327 aa13.96□□□□□ -0.17
SHANK1-206ENST00000468654 FAM213BQ8TBF2 198 aa13.96□□□□□ -0.17
SHANK1-206ENST00000468654 SFT2D1Q8WV19 159 aa13.96□□□□□ -0.17
SHANK1-206ENST00000468654 TRBV10-1A0A0K0K1A3 114 aa13.95□□□□□ -0.18
SHANK1-206ENST00000468654 SCO2A0A1W2PP80 73 aa13.95□□□□□ -0.18
SHANK1-206ENST00000468654 C1QBP02746 253 aa13.95□□□□□ -0.18
SHANK1-206ENST00000468654 S100A9P06702 114 aaKnown RBP13.95□□□□□ -0.18
SHANK1-206ENST00000468654 HMSDA8MTL9 139 aa13.94□□□□□ -0.18
SHANK1-206ENST00000468654 CXCL1P09341 107 aa13.94□□□□□ -0.18
SHANK1-206ENST00000468654 FAM30AQ9NZY2 134 aa13.94□□□□□ -0.18
SHANK1-206ENST00000468654 BCL2L11O43521 198 aa13.93□□□□□ -0.18
SHANK1-206ENST00000468654 PFDN1O60925 122 aa13.93□□□□□ -0.18
SHANK1-206ENST00000468654 RPL36AP83881 106 aaKnown RBP13.93□□□□□ -0.18
SHANK1-206ENST00000468654 RPL36ALQ969Q0 106 aaKnown RBP13.93□□□□□ -0.18
SHANK1-206ENST00000468654 MLST8Q9BVC4 326 aa13.93□□□□□ -0.18
SHANK1-206ENST00000468654 COX11Q9Y6N1 276 aa13.93□□□□□ -0.18
SHANK1-206ENST00000468654 URGCP-MRPS24S4R325 110 aa13.93□□□□□ -0.18
SHANK1-206ENST00000468654 A0A0D9SG52 128 aa13.92□□□□□ -0.18
SHANK1-206ENST00000468654 A0A1B0GV50 99 aa13.92□□□□□ -0.18
SHANK1-206ENST00000468654 FAM229AH3BQW9 127 aa13.92□□□□□ -0.18
SHANK1-206ENST00000468654 LECT2O14960 151 aa13.92□□□□□ -0.18
SHANK1-206ENST00000468654 UBE2D3P61077 147 aa13.92□□□□□ -0.18
SHANK1-206ENST00000468654 UBE2D2P62837 147 aa13.92□□□□□ -0.18
SHANK1-206ENST00000468654 RPL19P84098 196 aaKnown RBP13.92□□□□□ -0.18
SHANK1-206ENST00000468654 CHCHD7Q9BUK0 85 aa13.92□□□□□ -0.18
SHANK1-206ENST00000468654 ZNF471Q9BX82 626 aaPredicted RBP13.92□□□□□ -0.18
SHANK1-206ENST00000468654 TRBV7-3A0A075B6L6 115 aa13.91□□□□□ -0.18
SHANK1-206ENST00000468654 OR10G8Q8NGN5 311 aa13.91□□□□□ -0.18
SHANK1-206ENST00000468654 OR10AG1Q8NH19 301 aa13.91□□□□□ -0.18
SHANK1-206ENST00000468654 RMI2Q96E14 147 aa13.91□□□□□ -0.18
SHANK1-206ENST00000468654 KANTRA0A1W2PQU2 76 aa13.9□□□□□ -0.18
SHANK1-206ENST00000468654 SNAI2O43623 268 aa13.9□□□□□ -0.18
SHANK1-206ENST00000468654 Q6ZSA8 131 aa13.9□□□□□ -0.18
SHANK1-206ENST00000468654 BAGE2Q86Y30 109 aa13.9□□□□□ -0.18
SHANK1-206ENST00000468654 KLK12Q9UKR0 248 aa13.9□□□□□ -0.18
SHANK1-206ENST00000468654 H2AFB1P0C5Y9 115 aa13.89□□□□□ -0.19
SHANK1-206ENST00000468654 RAB4BP61018 213 aa13.89□□□□□ -0.19
SHANK1-206ENST00000468654 BAALCQ8WXS3 180 aa13.89□□□□□ -0.19
SHANK1-206ENST00000468654 DNAJC30Q96LL9 226 aa13.89□□□□□ -0.19
SHANK1-206ENST00000468654 SSBP4Q9BWG4 385 aaPredicted RBP13.89□□□□□ -0.19
SHANK1-206ENST00000468654 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.88□□□□□ -0.19
SHANK1-206ENST00000468654 A0A087WX48 190 aa13.88□□□□□ -0.19
SHANK1-206ENST00000468654 PRR27Q6MZM9 219 aa13.88□□□□□ -0.19
SHANK1-206ENST00000468654 IGKV2D-24A0A075B6R9 120 aa13.87□□□□□ -0.19
SHANK1-206ENST00000468654 OR5AL1P0C617 328 aa13.87□□□□□ -0.19
SHANK1-206ENST00000468654 EIF5AP63241 154 aaKnown RBP13.87□□□□□ -0.19
SHANK1-206ENST00000468654 ELOBQ15370 118 aa13.87□□□□□ -0.19
SHANK1-206ENST00000468654 ZNF56Q15929 161 aa13.87□□□□□ -0.19
SHANK1-206ENST00000468654 ATRAIDQ6UW56 229 aa13.87□□□□□ -0.19
SHANK1-206ENST00000468654 NEXN-AS1Q8NBZ9 246 aa13.87□□□□□ -0.19
SHANK1-206ENST00000468654 UBE2WQ96B02 151 aa13.87□□□□□ -0.19
SHANK1-206ENST00000468654 KCNIP4Q6PIL6 250 aa13.86□□□□□ -0.19
SHANK1-206ENST00000468654 TRBV6-8A0A0A6YYG3 113 aa13.85□□□□□ -0.19
SHANK1-206ENST00000468654 TMUB2Q71RG4 321 aa13.85□□□□□ -0.19
SHANK1-206ENST00000468654 C11orf52Q96A22 123 aa13.85□□□□□ -0.19
SHANK1-206ENST00000468654 RPL35P42766 123 aaKnown RBP13.84□□□□□ -0.19
SHANK1-206ENST00000468654 SPANXN1Q5VSR9 72 aa13.84□□□□□ -0.19
SHANK1-206ENST00000468654 Q8N976 141 aa13.84□□□□□ -0.19
SHANK1-206ENST00000468654 MANBALQ9NQG1 85 aa13.84□□□□□ -0.19
SHANK1-206ENST00000468654 MUC21A0A0G2JKD1 596 aa13.83□□□□□ -0.2
SHANK1-206ENST00000468654 MUC21A0A140T8X8 626 aa13.83□□□□□ -0.2
SHANK1-206ENST00000468654 Q0VG73 95 aa13.82□□□□□ -0.2
SHANK1-206ENST00000468654 DERL1Q9BUN8 251 aa13.82□□□□□ -0.2
SHANK1-206ENST00000468654 GNG13Q9P2W3 67 aa13.82□□□□□ -0.2
SHANK1-206ENST00000468654 TRAV1-1A0A0B4J248 108 aa13.81□□□□□ -0.2
SHANK1-206ENST00000468654 RBFOX3A6NFN3 312 aa13.81□□□□□ -0.2
SHANK1-206ENST00000468654 CCL20P78556 96 aa13.81□□□□□ -0.2
SHANK1-206ENST00000468654 AP1S3Q96PC3 154 aa13.81□□□□□ -0.2
SHANK1-206ENST00000468654 KIF25-AS1Q9Y6Z4 181 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms