RNA–Protein interactions for RNA: ENST00000468421.1

MSX1-202, Transcript of msh homeobox 1, humanhuman

TSL 3

Gene MSX1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-202ENST00000468421 CRYGDP07320 174 aa7.67□□□□□ -1.18
MSX1-202ENST00000468421 RAB4AP20338 218 aa7.67□□□□□ -1.18
MSX1-202ENST00000468421 LGALS9BQ3B8N2 356 aa7.67□□□□□ -1.18
MSX1-202ENST00000468421 FAM74A4Q5TZK3 123 aa7.67□□□□□ -1.18
MSX1-202ENST00000468421 SMIM15Q7Z3B0 74 aa7.67□□□□□ -1.18
MSX1-202ENST00000468421 LINC00612Q8N6U2 182 aa7.67□□□□□ -1.18
MSX1-202ENST00000468421 DPH3P1Q9H4G8 78 aa7.67□□□□□ -1.18
MSX1-202ENST00000468421 GAGE12BA1L429 117 aa7.66□□□□□ -1.18
MSX1-202ENST00000468421 A8MWV9 139 aa7.66□□□□□ -1.18
MSX1-202ENST00000468421 SMKR1H3BMG3 65 aa7.66□□□□□ -1.18
MSX1-202ENST00000468421 RS1O15537 224 aa7.66□□□□□ -1.18
MSX1-202ENST00000468421 GAGE7O76087 117 aa7.66□□□□□ -1.18
MSX1-202ENST00000468421 GAS8-AS1O95177 125 aa7.66□□□□□ -1.18
MSX1-202ENST00000468421 MGPP08493 103 aa7.66□□□□□ -1.18
MSX1-202ENST00000468421 GAGE12FP0CL80 117 aa7.66□□□□□ -1.18
MSX1-202ENST00000468421 GAGE12GP0CL81 117 aa7.66□□□□□ -1.18
MSX1-202ENST00000468421 GAGE12IP0CL82 117 aa7.66□□□□□ -1.18
MSX1-202ENST00000468421 FAM222AQ5U5X8 452 aa7.66□□□□□ -1.18
MSX1-202ENST00000468421 CFAP126Q5VTH2 177 aa7.66□□□□□ -1.18
MSX1-202ENST00000468421 UFSP1Q6NVU6 142 aa7.66□□□□□ -1.18
MSX1-202ENST00000468421 SPATA25Q9BR10 227 aa7.66□□□□□ -1.18
MSX1-202ENST00000468421 CELA1Q9UNI1 258 aa7.66□□□□□ -1.18
MSX1-202ENST00000468421 IGHV3-73A0A0B4J1V6 119 aa7.65□□□□□ -1.18
MSX1-202ENST00000468421 TRAV26-2A0A0B4J265 109 aa7.65□□□□□ -1.18
MSX1-202ENST00000468421 C1orf196B1AJZ1 125 aa7.65□□□□□ -1.18
MSX1-202ENST00000468421 NCR2O95944 276 aa7.65□□□□□ -1.18
MSX1-202ENST00000468421 SMIM17P0DL12 118 aa7.65□□□□□ -1.18
MSX1-202ENST00000468421 GATA1P15976 413 aaPredicted RBP7.65□□□□□ -1.18
MSX1-202ENST00000468421 SRIP30626 198 aa7.65□□□□□ -1.18
MSX1-202ENST00000468421 NDUFAF3Q9BU61 184 aa7.65□□□□□ -1.18
MSX1-202ENST00000468421 DKK2Q9UBU2 259 aa7.65□□□□□ -1.18
MSX1-202ENST00000468421 TRAV4A0A0B4J268 109 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 LYRM9A8MSI8 78 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 D6R8Y8 96 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 HIST1H2BKO60814 126 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 IGHV3-53P01767 116 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 HIST1H2BJP06899 126 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 HIST1H2BOP23527 126 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 HIST1H2BBP33778 126 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 HIST1H2BDP58876 126 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 HIST1H2BCP62807 126 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 DEFA6Q01524 100 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 ZNF56Q15929 161 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 HIST2H2BEQ16778 126 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.64□□□□□ -1.19
MSX1-202ENST00000468421 HIST1H2BHQ93079 126 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 ZNF479Q96JC4 524 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 HIST1H2BNQ99877 126 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 HIST1H2BMQ99879 126 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 ALKBH7Q9BT30 221 aaPredicted RBP7.64□□□□□ -1.19
MSX1-202ENST00000468421 TMA7Q9Y2S6 64 aaKnown RBP7.64□□□□□ -1.19
MSX1-202ENST00000468421 U3KQK5 164 aa7.64□□□□□ -1.19
MSX1-202ENST00000468421 HUWE1Q7Z6Z7 4374 aaKnown RBP7.64□□□□□ -1.19
MSX1-202ENST00000468421 TRGV2A0A075B6R0 118 aa7.63□□□□□ -1.19
MSX1-202ENST00000468421 NPYP01303 97 aa7.63□□□□□ -1.19
MSX1-202ENST00000468421 DEFB130BP0DP73 79 aa7.63□□□□□ -1.19
MSX1-202ENST00000468421 DEFB130AP0DP74 79 aa7.63□□□□□ -1.19
MSX1-202ENST00000468421 SUMO4Q6EEV6 95 aa7.63□□□□□ -1.19
MSX1-202ENST00000468421 OR4C5Q8NGB2 326 aa7.63□□□□□ -1.19
MSX1-202ENST00000468421 B9D2Q9BPU9 175 aa7.63□□□□□ -1.19
MSX1-202ENST00000468421 C11orf68Q9H3H3 251 aaKnown RBP7.63□□□□□ -1.19
MSX1-202ENST00000468421 A0A0J9YWU9 116 aa7.62□□□□□ -1.19
MSX1-202ENST00000468421 F5H697 171 aa7.62□□□□□ -1.19
MSX1-202ENST00000468421 RHODO00212 210 aa7.62□□□□□ -1.19
MSX1-202ENST00000468421 CKS2P33552 79 aa7.62□□□□□ -1.19
MSX1-202ENST00000468421 RAB5BP61020 215 aa7.62□□□□□ -1.19
MSX1-202ENST00000468421 IQCJQ1A5X6 159 aa7.62□□□□□ -1.19
MSX1-202ENST00000468421 Q6ZSN1 163 aa7.62□□□□□ -1.19
MSX1-202ENST00000468421 ORMDL3Q8N138 153 aa7.62□□□□□ -1.19
MSX1-202ENST00000468421 NRACQ8N912 160 aa7.62□□□□□ -1.19
MSX1-202ENST00000468421 MRAP2Q96G30 205 aa7.62□□□□□ -1.19
MSX1-202ENST00000468421 PRELID3AQ96N28 172 aa7.62□□□□□ -1.19
MSX1-202ENST00000468421 DNAH9Q9NYC9 4486 aa7.61□□□□□ -1.19
MSX1-202ENST00000468421 SPART-AS1P0CW21 52 aa7.61□□□□□ -1.19
MSX1-202ENST00000468421 DAD1P61803 113 aa7.61□□□□□ -1.19
MSX1-202ENST00000468421 ZFP2Q6ZN57 461 aa7.61□□□□□ -1.19
MSX1-202ENST00000468421 C18orf32Q8TCD1 76 aa7.61□□□□□ -1.19
MSX1-202ENST00000468421 RPL39LQ96EH5 51 aaKnown RBP7.61□□□□□ -1.19
MSX1-202ENST00000468421 C18orf15Q96N68 181 aa7.61□□□□□ -1.19
MSX1-202ENST00000468421 M0QY20 66 aa7.6□□□□□ -1.19
MSX1-202ENST00000468421 TNFRSF6BO95407 300 aa7.6□□□□□ -1.19
MSX1-202ENST00000468421 PPBPP02775 128 aa7.6□□□□□ -1.19
MSX1-202ENST00000468421 P0DMU3 169 aa7.6□□□□□ -1.19
MSX1-202ENST00000468421 FAM231AP0DMU4 169 aa7.6□□□□□ -1.19
MSX1-202ENST00000468421 FAM231CP0DMU5 169 aa7.6□□□□□ -1.19
MSX1-202ENST00000468421 ZMAT4Q9H898 229 aa7.6□□□□□ -1.19
MSX1-202ENST00000468421 EDA2RQ9HAV5 297 aa7.6□□□□□ -1.19
MSX1-202ENST00000468421 Q9UF83 564 aa7.6□□□□□ -1.19
MSX1-202ENST00000468421 FHL2Q14192 279 aa7.59□□□□□ -1.19
MSX1-202ENST00000468421 C12orf74Q32Q52 190 aa7.59□□□□□ -1.19
MSX1-202ENST00000468421 NBEAL2Q6ZNJ1 2754 aa7.59□□□□□ -1.2
MSX1-202ENST00000468421 TRGV4A0A0C4DH28 118 aa7.58□□□□□ -1.2
MSX1-202ENST00000468421 TEX48A0A1B0GUV7 120 aa7.58□□□□□ -1.2
MSX1-202ENST00000468421 K7EQD1 137 aa7.58□□□□□ -1.2
MSX1-202ENST00000468421 HOXA5P20719 270 aa7.58□□□□□ -1.2
MSX1-202ENST00000468421 NDUFA6P56556 154 aa7.58□□□□□ -1.2
MSX1-202ENST00000468421 LINC00310P59036 64 aa7.58□□□□□ -1.2
MSX1-202ENST00000468421 Q0VG73 95 aa7.58□□□□□ -1.2
MSX1-202ENST00000468421 OR10J3Q5JRS4 329 aa7.58□□□□□ -1.2
MSX1-202ENST00000468421 SLC25A29Q8N8R3 303 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms