RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 MT4P47944 62 aa2.58□□□□□ -2
HMGB1-207ENST00000468384 PMAIP1Q13794 54 aa2.58□□□□□ -2
HMGB1-207ENST00000468384 OR10G4Q8NGN3 311 aa2.58□□□□□ -2
HMGB1-207ENST00000468384 COQ8AQ8NI60 647 aa2.58□□□□□ -2
HMGB1-207ENST00000468384 GALMQ96C23 342 aa2.58□□□□□ -2
HMGB1-207ENST00000468384 MIXL1Q9H2W2 232 aa2.58□□□□□ -2
HMGB1-207ENST00000468384 BIN3Q9NQY0 253 aa2.58□□□□□ -2
HMGB1-207ENST00000468384 TAS2R1Q9NYW7 299 aa2.58□□□□□ -2
HMGB1-207ENST00000468384 SS18L2Q9UHA2 77 aa2.58□□□□□ -2
HMGB1-207ENST00000468384 POMPQ9Y244 141 aa2.58□□□□□ -2
HMGB1-207ENST00000468384 FAM236DA0A1B0GTK5 79 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 IGLC7A0M8Q6 106 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 KRBOX1C9JBD0 128 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 INS-IGF2F8WCM5 200 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 TSTD3H0UI37 97 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 GYG2O15488 501 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 CRYZL1O95825 349 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 HTR1AP08908 422 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 OR5G3P0C626 314 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 FAM236CP0DP71 79 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 CCL1P22362 96 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 GADD45AP24522 165 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 RBX1P62877 108 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 FLI1Q01543 452 aaPredicted RBP2.57□□□□□ -2
HMGB1-207ENST00000468384 JOSD1Q15040 202 aaPredicted RBP2.57□□□□□ -2
HMGB1-207ENST00000468384 UBE2NLQ5JXB2 153 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 LCE1FQ5T754 118 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 ZNF322Q6U7Q0 402 aaPredicted RBP2.57□□□□□ -2
HMGB1-207ENST00000468384 SH2D6Q7Z4S9 175 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 MCFD2Q8NI22 146 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 BORCS5Q969J3 196 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 MRPL48Q96GC5 212 aaKnown RBP2.57□□□□□ -2
HMGB1-207ENST00000468384 NARS2Q96I59 477 aaKnown RBP2.57□□□□□ -2
HMGB1-207ENST00000468384 HSD17B10Q99714 261 aaKnown RBP2.57□□□□□ -2
HMGB1-207ENST00000468384 ANAPC13Q9BS18 74 aa2.57□□□□□ -2
HMGB1-207ENST00000468384 ZNF2Q9BSG1 426 aaPredicted RBP2.57□□□□□ -2
HMGB1-207ENST00000468384 ZNF706Q9Y5V0 76 aaPredicted RBP2.57□□□□□ -2
HMGB1-207ENST00000468384 TRGV1A0A0A0MS02 117 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 MED6O75586 246 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 PFN1P07737 140 aaKnown RBP2.56□□□□□ -2
HMGB1-207ENST00000468384 OR13C7P0DN81 318 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 IDO1P14902 403 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 MP68P56378 58 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 RAB2AP61019 212 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 HLA-DRB3P79483 266 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 ERCC8Q13216 396 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 SSX1Q16384 188 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 C1orf194Q5T5A4 169 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 BCL2L15Q5TBC7 163 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 GLYATQ6IB77 296 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 LPCAT3Q6P1A2 487 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 Q6Q795 121 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 ATP5L2Q7Z4Y8 100 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 LINC00304Q8N9R0 145 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 OR51A2Q8NGJ7 313 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 OR10A6Q8NH74 314 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 OR13C6PQ8NH95 151 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 FAM104AQ969W3 186 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 ACY3Q96HD9 319 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 MARVELD1Q9BSK0 173 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 RNASE7Q9H1E1 156 aaKnown RBP2.56□□□□□ -2
HMGB1-207ENST00000468384 TMEM56-RWDD3S4R434 201 aa2.56□□□□□ -2
HMGB1-207ENST00000468384 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.55□□□□□ -2
HMGB1-207ENST00000468384 INMT-MINDY4F8WBC2 141 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 H7BYZ3 331 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 COPEO14579 308 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 GEMIN2O14893 280 aaKnown RBP2.55□□□□□ -2
HMGB1-207ENST00000468384 PDE6DO43924 150 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 ZNF861PO60384 105 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 COX7A2P2O60397 106 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 PPBPP02775 128 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 BPGMP07738 259 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 S100GP29377 79 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 UBE2AP49459 152 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 DEFA1P59665 94 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 CDK5Q00535 292 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 CCDC153Q494R4 210 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 GDPD1Q8N9F7 314 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 OR8D4Q8NGM9 314 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 OR52N1Q8NH53 320 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 PP6455Q8WZ26 134 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 TMEM203Q969S6 136 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 UBE2WQ96B02 151 aa2.55□□□□□ -2
HMGB1-207ENST00000468384 TRGV4A0A0C4DH28 118 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 HLA-DQA1P01909 254 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 TLX1NBP0CAT3 122 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 FGF6P10767 208 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 SCGB1A1P11684 91 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 ZNF19P17023 458 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 GPX2P18283 190 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 DDTP30046 118 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 RPS10P46783 165 aaKnown RBP2.54□□□□□ -2
HMGB1-207ENST00000468384 PSMB3P49720 205 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 RHOBP62745 196 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 FABP5Q01469 135 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 BATFQ16520 125 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 TIFABQ6ZNK6 161 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 EIF4E3Q8N5X7 224 aaKnown RBP2.54□□□□□ -2
HMGB1-207ENST00000468384 TSKUQ8WUA8 353 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 ORAOV1Q8WV07 137 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms