RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 AMTP48728 403 aa6.84□□□□□ -1.31
VPS26A-204ENST00000467852 MT1HP80294 61 aa6.84□□□□□ -1.31
VPS26A-204ENST00000467852 SCGB3A2Q96PL1 93 aa6.84□□□□□ -1.31
VPS26A-204ENST00000467852 JPT2Q9H910 190 aa6.84□□□□□ -1.31
VPS26A-204ENST00000467852 F6UZH7 168 aa6.83□□□□□ -1.32
VPS26A-204ENST00000467852 RNASE3P12724 160 aaKnown RBP6.83□□□□□ -1.32
VPS26A-204ENST00000467852 GAGE6Q13070 117 aa6.83□□□□□ -1.32
VPS26A-204ENST00000467852 GGACTQ9BVM4 153 aa6.83□□□□□ -1.32
VPS26A-204ENST00000467852 FCGBPQ9Y6R7 5405 aaPredicted RBP6.82□□□□□ -1.32
VPS26A-204ENST00000467852 EIF3GO75821 320 aaKnown RBP eCLIP6.82□□□□□ -1.32
VPS26A-204ENST00000467852 FAM74A4Q5TZK3 123 aa6.82□□□□□ -1.32
VPS26A-204ENST00000467852 PRR27Q6MZM9 219 aa6.82□□□□□ -1.32
VPS26A-204ENST00000467852 TMEM14EPQ6UXP3 125 aa6.82□□□□□ -1.32
VPS26A-204ENST00000467852 NRARPQ7Z6K4 114 aa6.82□□□□□ -1.32
VPS26A-204ENST00000467852 SMIM8Q96KF7 97 aa6.82□□□□□ -1.32
VPS26A-204ENST00000467852 PRRT1Q99946 306 aa6.82□□□□□ -1.32
VPS26A-204ENST00000467852 TREM1Q9NP99 234 aa6.82□□□□□ -1.32
VPS26A-204ENST00000467852 KRTAP23-1A1A580 65 aa6.81□□□□□ -1.32
VPS26A-204ENST00000467852 A0A1W2PNN7 141 aa6.8□□□□□ -1.32
VPS26A-204ENST00000467852 SSSCA1O60232 199 aa6.8□□□□□ -1.32
VPS26A-204ENST00000467852 RANP62826 216 aaKnown RBP6.8□□□□□ -1.32
VPS26A-204ENST00000467852 ZNF674Q2M3X9 581 aa6.8□□□□□ -1.32
VPS26A-204ENST00000467852 TMEM97Q5BJF2 176 aa6.8□□□□□ -1.32
VPS26A-204ENST00000467852 DIRAS2Q96HU8 199 aa6.8□□□□□ -1.32
VPS26A-204ENST00000467852 NMES1Q9C002 83 aa6.8□□□□□ -1.32
VPS26A-204ENST00000467852 USH2AO75445 5202 aa6.79□□□□□ -1.32
VPS26A-204ENST00000467852 A0A087WZ39 114 aa6.79□□□□□ -1.32
VPS26A-204ENST00000467852 FAM25AB3EWG3 89 aa6.79□□□□□ -1.32
VPS26A-204ENST00000467852 FAM25CB3EWG5 89 aa6.79□□□□□ -1.32
VPS26A-204ENST00000467852 FAM25GB3EWG6 89 aa6.79□□□□□ -1.32
VPS26A-204ENST00000467852 S100A4P26447 101 aaKnown RBP6.79□□□□□ -1.32
VPS26A-204ENST00000467852 SEC61BP60468 96 aaKnown RBP6.79□□□□□ -1.32
VPS26A-204ENST00000467852 GAGE2BQ13066 116 aa6.79□□□□□ -1.32
VPS26A-204ENST00000467852 PHF5AQ7RTV0 110 aaKnown RBP6.79□□□□□ -1.32
VPS26A-204ENST00000467852 LINC00337Q8N6G1 96 aa6.79□□□□□ -1.32
VPS26A-204ENST00000467852 PHYHIPLQ96FC7 376 aa6.79□□□□□ -1.32
VPS26A-204ENST00000467852 SLC25A2Q9BXI2 301 aa6.79□□□□□ -1.32
VPS26A-204ENST00000467852 SLIRPQ9GZT3 109 aaKnown RBP6.79□□□□□ -1.32
VPS26A-204ENST00000467852 PPDPFQ9H3Y8 114 aa6.79□□□□□ -1.32
VPS26A-204ENST00000467852 C11orf21Q9P2W6 132 aa6.79□□□□□ -1.32
VPS26A-204ENST00000467852 PHLDA3Q9Y5J5 127 aa6.79□□□□□ -1.32
VPS26A-204ENST00000467852 GAGE12HA6NDE8 117 aa6.78□□□□□ -1.32
VPS26A-204ENST00000467852 TSC22D2O75157 780 aa6.78□□□□□ -1.32
VPS26A-204ENST00000467852 RPL29P47914 159 aaKnown RBP6.78□□□□□ -1.32
VPS26A-204ENST00000467852 LINC00173Q6ZV60 143 aa6.78□□□□□ -1.32
VPS26A-204ENST00000467852 OR10G8Q8NGN5 311 aa6.78□□□□□ -1.32
VPS26A-204ENST00000467852 RPP21Q9H633 154 aaKnown RBP6.78□□□□□ -1.32
VPS26A-204ENST00000467852 MACF1Q9UPN3 7388 aaKnown RBP6.78□□□□□ -1.32
VPS26A-204ENST00000467852 TRBV25-1A0A075B6N4 114 aa6.77□□□□□ -1.33
VPS26A-204ENST00000467852 GVQW2A0A096LPI5 108 aaPredicted RBP6.77□□□□□ -1.33
VPS26A-204ENST00000467852 HPGDSO60760 199 aa6.77□□□□□ -1.33
VPS26A-204ENST00000467852 AKAIN1P0CW23 69 aa6.77□□□□□ -1.33
VPS26A-204ENST00000467852 TGFBR1P36897 503 aa6.77□□□□□ -1.33
VPS26A-204ENST00000467852 SSBP1Q04837 148 aaKnown RBP6.77□□□□□ -1.33
VPS26A-204ENST00000467852 ARL16Q0P5N6 197 aa6.77□□□□□ -1.33
VPS26A-204ENST00000467852 CLVS1Q8IUQ0 354 aaPredicted RBP6.77□□□□□ -1.33
VPS26A-204ENST00000467852 C15orf40Q8WUR7 153 aa6.77□□□□□ -1.33
VPS26A-204ENST00000467852 MITD1Q8WV92 249 aa6.77□□□□□ -1.33
VPS26A-204ENST00000467852 TVP23CQ96ET8 276 aa6.77□□□□□ -1.33
VPS26A-204ENST00000467852 CARD19Q96LW7 228 aa6.77□□□□□ -1.33
VPS26A-204ENST00000467852 BCL7BQ9BQE9 202 aa6.77□□□□□ -1.33
VPS26A-204ENST00000467852 NAA50Q9GZZ1 169 aaKnown RBP6.77□□□□□ -1.33
VPS26A-204ENST00000467852 SCP2D1Q9UJQ7 156 aa6.77□□□□□ -1.33
VPS26A-204ENST00000467852 GABARAPL2P60520 117 aa6.76□□□□□ -1.33
VPS26A-204ENST00000467852 C9orf116Q5BN46 136 aaPredicted RBP6.76□□□□□ -1.33
VPS26A-204ENST00000467852 C20orf203Q8NBC4 194 aa6.76□□□□□ -1.33
VPS26A-204ENST00000467852 TYMSOSQ8TAI1 123 aa6.76□□□□□ -1.33
VPS26A-204ENST00000467852 FXYD5Q96DB9 178 aa6.76□□□□□ -1.33
VPS26A-204ENST00000467852 HYLS1Q96M11 299 aa6.76□□□□□ -1.33
VPS26A-204ENST00000467852 LOC107984640A0A0U1RRK4 108 aa6.75□□□□□ -1.33
VPS26A-204ENST00000467852 SULT1A2P50226 295 aa6.75□□□□□ -1.33
VPS26A-204ENST00000467852 AQP4P55087 323 aa6.75□□□□□ -1.33
VPS26A-204ENST00000467852 TMEM128Q5BJH2 165 aa6.75□□□□□ -1.33
VPS26A-204ENST00000467852 NTM-AS1Q6ZSK4 140 aa6.75□□□□□ -1.33
VPS26A-204ENST00000467852 CMTM2Q8TAZ6 248 aa6.75□□□□□ -1.33
VPS26A-204ENST00000467852 FAM167A-AS1Q96KT0 104 aa6.75□□□□□ -1.33
VPS26A-204ENST00000467852 NDFIP1Q9BT67 221 aa6.75□□□□□ -1.33
VPS26A-204ENST00000467852 LYRM2Q9NU23 88 aaPredicted RBP6.75□□□□□ -1.33
VPS26A-204ENST00000467852 OR5AC2Q9NZP5 309 aa6.75□□□□□ -1.33
VPS26A-204ENST00000467852 M0R2T5 61 aa6.74□□□□□ -1.33
VPS26A-204ENST00000467852 ZNF80P51504 273 aaPredicted RBP6.74□□□□□ -1.33
VPS26A-204ENST00000467852 NEXN-AS1Q8NBZ9 246 aa6.74□□□□□ -1.33
VPS26A-204ENST00000467852 TSKUQ8WUA8 353 aa6.74□□□□□ -1.33
VPS26A-204ENST00000467852 DERL1Q9BUN8 251 aa6.74□□□□□ -1.33
VPS26A-204ENST00000467852 A0A1B0GUV1 79 aa6.73□□□□□ -1.33
VPS26A-204ENST00000467852 GCGP01275 180 aa6.73□□□□□ -1.33
VPS26A-204ENST00000467852 TAS2R30P59541 319 aa6.73□□□□□ -1.33
VPS26A-204ENST00000467852 EIF5AL1Q6IS14 154 aaKnown RBP6.73□□□□□ -1.33
VPS26A-204ENST00000467852 GOLT1AQ6ZVE7 132 aa6.73□□□□□ -1.33
VPS26A-204ENST00000467852 MIR17HGQ75NE6 70 aa6.73□□□□□ -1.33
VPS26A-204ENST00000467852 SFRP2Q96HF1 295 aa6.73□□□□□ -1.33
VPS26A-204ENST00000467852 CNBD2Q96M20 576 aa6.73□□□□□ -1.33
VPS26A-204ENST00000467852 EXTL2Q9UBQ6 330 aa6.73□□□□□ -1.33
VPS26A-204ENST00000467852 WDR83OSQ9Y284 106 aa6.73□□□□□ -1.33
VPS26A-204ENST00000467852 IGLV4-60A0A075B6I1 120 aa6.72□□□□□ -1.33
VPS26A-204ENST00000467852 TRBV6-1A0A0K0K1D8 114 aa6.72□□□□□ -1.33
VPS26A-204ENST00000467852 FGF6P10767 208 aa6.72□□□□□ -1.33
VPS26A-204ENST00000467852 BAXQ07812 192 aa6.72□□□□□ -1.33
VPS26A-204ENST00000467852 FAM74A1Q5RGS3 127 aa6.72□□□□□ -1.33
VPS26A-204ENST00000467852 OR11H4Q8NGC9 324 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms