RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ARV1Q9H2C2 271 aa1.53□□□□□ -2.16
XRN1-206ENST00000467077 ACOT13Q9NPJ3 140 aa1.53□□□□□ -2.16
XRN1-206ENST00000467077 IFT46Q9NQC8 304 aa1.53□□□□□ -2.16
XRN1-206ENST00000467077 FUT9Q9Y231 359 aa1.53□□□□□ -2.16
XRN1-206ENST00000467077 TRAV1-2A0A0B4J238 106 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 TRAV12-3A0A0B4J271 114 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 TRGV4A0A0C4DH28 118 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 CEBPZOSA8MTT3 80 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 SNRPGP15A8MWD9 76 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 GABARAPH6UMI1 98 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 H7BYZ3 331 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 OR7C2O60412 319 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 ATG12O94817 140 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 IGKV1-39P01597 117 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 IGKV1-5P01602 117 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 IGHV3-30P01768 117 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 IGHV3-33P01772 117 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 IGKV1D-39P04432 117 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 FABP1P07148 127 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 OR5AC1P0C628 307 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 IGHV3-30-3P0DP02 117 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 IGHV3-30-5P0DP03 117 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 SRIP30626 198 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 CRYBA4P53673 196 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 SPCS3P61009 180 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 TSPAN5P62079 268 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 MLLT11Q13015 90 aaPredicted RBP1.52□□□□□ -2.17
XRN1-206ENST00000467077 OR2F1Q13607 317 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 WFDC2Q14508 124 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 BSXQ3C1V8 233 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 SP6Q3SY56 376 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 LAIR2Q6ISS4 152 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 LPCAT3Q6P1A2 487 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 SPINT4Q6UDR6 99 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 Q6ZRU5 148 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 C8orf59Q8N0T1 100 aaPredicted RBP1.52□□□□□ -2.17
XRN1-206ENST00000467077 ORMDL3Q8N138 153 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 SLC25A29Q8N8R3 303 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 OR8A1Q8NGG7 326 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 OR5H2Q8NGV7 314 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 OR1S1Q8NH92 325 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 RNASEH2CQ8TDP1 164 aaKnown RBP1.52□□□□□ -2.17
XRN1-206ENST00000467077 PARD6GQ9BYG4 376 aaPredicted RBP1.52□□□□□ -2.17
XRN1-206ENST00000467077 FXYD6Q9H0Q3 95 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 DIABLOQ9NR28 239 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 FKBP14Q9NWM8 211 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 SCN3BQ9NY72 215 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 PRO0255Q9UI72 69 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 VAX2Q9UIW0 290 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 LSM2Q9Y333 95 aaKnown RBP1.52□□□□□ -2.17
XRN1-206ENST00000467077 PKHD1L1Q86WI1 4243 aa1.52□□□□□ -2.17
XRN1-206ENST00000467077 IGKV1D-37A0A075B6S9 117 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 IGHV6-1A0A0B4J1U7 121 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 TRAV8-2A0A0B4J237 113 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 A0A0D9SG52 128 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 C3orf85A0A1B0GTC6 90 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 CRYM-AS1A6NIL9 109 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 CENPXA8MT69 81 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 A8MWL6 223 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 IBA57-AS1B1ANH7 110 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 C9JCJ5 164 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 ATP5HO75947 161 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 GCGP01275 180 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 ORM2P19652 201 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 HLA-DMAP28067 261 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 PIGPP57054 158 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 IL15RAQ13261 267 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 TDRG1Q3Y452 100 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 OR10J3Q5JRS4 329 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 C10orf67Q8IYJ2 551 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 SLC7A5P1Q8MH63 180 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 LRRC20Q8TCA0 184 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 BLNKQ8WV28 456 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 TP53RKQ96S44 253 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 MGLLQ99685 303 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 C20orf144Q9BQM9 153 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 TXNDC17Q9BRA2 123 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 MRPL32Q9BYC8 188 aaKnown RBP1.51□□□□□ -2.17
XRN1-206ENST00000467077 SLC25A31Q9H0C2 315 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.51□□□□□ -2.17
XRN1-206ENST00000467077 MRPL16Q9NX20 251 aaKnown RBP1.51□□□□□ -2.17
XRN1-206ENST00000467077 KLF12Q9Y4X4 402 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 TMEM56-RWDD3S4R434 201 aa1.51□□□□□ -2.17
XRN1-206ENST00000467077 A0A0A6YYH2 397 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 TRAV8-4A0A0B4J246 113 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 TRAV8-6A0A0B4J262 113 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 TRDV1A0A1B0GX56 115 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 A6NJ64 397 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 SPINK4O60575 86 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 PITX3O75364 302 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 CFDP00746 253 aaPredicted RBP1.5□□□□□ -2.17
XRN1-206ENST00000467077 P01737 135 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 ORM1P02763 201 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 SFTA3P0C7M3 94 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 CXCL3P19876 107 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 S100A7P31151 101 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 RNASE4P34096 147 aaKnown RBP1.5□□□□□ -2.17
XRN1-206ENST00000467077 PRSS3P35030 304 aa1.5□□□□□ -2.17
XRN1-206ENST00000467077 RCVRNP35243 200 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms