RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 IGHV1-24A0A0C4DH33 117 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 M0R3E3 92 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 RPS10P46783 165 aaKnown RBP3.59□□□□□ -1.83
CXXC4-202ENST00000466963 RRAS2P62070 204 aaPredicted RBP3.59□□□□□ -1.83
CXXC4-202ENST00000466963 LINC01620Q4KN68 170 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 PRR9Q5T870 116 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 LINC00299Q6ZSB3 139 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 OR2G3Q8NGZ4 309 aa3.59□□□□□ -1.83
CXXC4-202ENST00000466963 TRAV1-1A0A0B4J248 108 aa3.59□□□□□ -1.84
CXXC4-202ENST00000466963 F6UZH7 168 aa3.59□□□□□ -1.84
CXXC4-202ENST00000466963 TPT1P13693 172 aaKnown RBP3.59□□□□□ -1.84
CXXC4-202ENST00000466963 S100A4P26447 101 aaKnown RBP3.59□□□□□ -1.84
CXXC4-202ENST00000466963 RAB2AP61019 212 aa3.59□□□□□ -1.84
CXXC4-202ENST00000466963 NCS1P62166 190 aa3.59□□□□□ -1.84
CXXC4-202ENST00000466963 HIST1H2BAQ96A08 127 aa3.59□□□□□ -1.84
CXXC4-202ENST00000466963 LINC00526Q96FQ7 95 aa3.59□□□□□ -1.84
CXXC4-202ENST00000466963 A0A087WYN8 130 aa3.58□□□□□ -1.84
CXXC4-202ENST00000466963 A0A1W2PRE2 83 aa3.58□□□□□ -1.84
CXXC4-202ENST00000466963 C7orf66A4D0T2 115 aa3.58□□□□□ -1.84
CXXC4-202ENST00000466963 MBPP02686 304 aaPredicted RBP3.58□□□□□ -1.84
CXXC4-202ENST00000466963 FHITP49789 147 aa3.58□□□□□ -1.84
CXXC4-202ENST00000466963 ZNF674Q2M3X9 581 aa3.58□□□□□ -1.84
CXXC4-202ENST00000466963 LGALSLQ3ZCW2 172 aaPredicted RBP3.58□□□□□ -1.84
CXXC4-202ENST00000466963 KRTAP26-1Q6PEX3 210 aa3.58□□□□□ -1.84
CXXC4-202ENST00000466963 ENHOQ6UWT2 76 aa3.58□□□□□ -1.84
CXXC4-202ENST00000466963 TMEM252Q8N6L7 170 aa3.58□□□□□ -1.84
CXXC4-202ENST00000466963 CCDC32Q9BV29 185 aa3.58□□□□□ -1.84
CXXC4-202ENST00000466963 MLST8Q9BVC4 326 aa3.58□□□□□ -1.84
CXXC4-202ENST00000466963 ZNF25P17030 456 aaPredicted RBP3.58□□□□□ -1.84
CXXC4-202ENST00000466963 HNRNPA3P51991 378 aaKnown RBP3.58□□□□□ -1.84
CXXC4-202ENST00000466963 SCGB1C1Q8TD33 95 aa3.58□□□□□ -1.84
CXXC4-202ENST00000466963 NMES1Q9C002 83 aa3.58□□□□□ -1.84
CXXC4-202ENST00000466963 WDR61Q9GZS3 305 aaKnown RBP3.58□□□□□ -1.84
CXXC4-202ENST00000466963 GAGE12JA6NER3 117 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 J3KRW8 73 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 OR7C2O60412 319 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 ATP6V1G2O95670 118 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 GAGE1Q13065 139 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 GAGE4Q13068 117 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 GAGE5Q13069 117 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 GAGE13Q4V321 117 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 EXOC3-AS1Q8N2X6 119 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 TNFRSF6BO95407 300 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 FLI1Q01543 452 aaPredicted RBP3.57□□□□□ -1.84
CXXC4-202ENST00000466963 IL15RAQ13261 267 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 MUC21Q5SSG8 566 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 PSMG3Q9BT73 122 aaPredicted RBP3.57□□□□□ -1.84
CXXC4-202ENST00000466963 IGHV1-58A0A0C4DH39 117 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 LOC100131303A0A0U1RQF7 123 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 H3BP45 60 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 RNASE3P12724 160 aaKnown RBP3.57□□□□□ -1.84
CXXC4-202ENST00000466963 CAV2P51636 162 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 RPS20P60866 119 aaKnown RBP3.57□□□□□ -1.84
CXXC4-202ENST00000466963 SERF2P84101 59 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 MBD2Q9UBB5 411 aa3.57□□□□□ -1.84
CXXC4-202ENST00000466963 UBE2L5PA0A1B0GUS4 154 aa3.56□□□□□ -1.84
CXXC4-202ENST00000466963 ANGP03950 147 aaKnown RBP3.56□□□□□ -1.84
CXXC4-202ENST00000466963 CACNG7P62955 275 aa3.56□□□□□ -1.84
CXXC4-202ENST00000466963 PHYHIPLQ96FC7 376 aa3.56□□□□□ -1.84
CXXC4-202ENST00000466963 AQP10Q96PS8 301 aa3.56□□□□□ -1.84
CXXC4-202ENST00000466963 SEC22CQ9BRL7 303 aa3.56□□□□□ -1.84
CXXC4-202ENST00000466963 PSG8Q9UQ74 426 aa3.56□□□□□ -1.84
CXXC4-202ENST00000466963 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.56□□□□□ -1.84
CXXC4-202ENST00000466963 A0A1W2PPV4 95 aa3.56□□□□□ -1.84
CXXC4-202ENST00000466963 PHOX2AO14813 284 aa3.56□□□□□ -1.84
CXXC4-202ENST00000466963 TCRAP04437 139 aa3.56□□□□□ -1.84
CXXC4-202ENST00000466963 FAM162BQ5T6X4 162 aa3.56□□□□□ -1.84
CXXC4-202ENST00000466963 XP32Q5T750 250 aa3.56□□□□□ -1.84
CXXC4-202ENST00000466963 TRIQKQ629K1 86 aa3.56□□□□□ -1.84
CXXC4-202ENST00000466963 SMIM12Q96EX1 92 aa3.56□□□□□ -1.84
CXXC4-202ENST00000466963 FMC1Q96HJ9 113 aa3.56□□□□□ -1.84
CXXC4-202ENST00000466963 NAGKQ9UJ70 344 aa3.56□□□□□ -1.84
CXXC4-202ENST00000466963 LOC107984640A0A0U1RRK4 108 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 GNRH2O43555 120 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 OR5AL1P0C617 328 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 FGF6P10767 208 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 PYDC2Q56P42 97 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 DPH3Q96FX2 82 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 C2orf48Q96LS8 159 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 BIN3Q9NQY0 253 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 PHLDA3Q9Y5J5 127 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 hDV102S1A0JD36 115 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 CXorf1O96002 111 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 PYYP10082 97 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 FUSP35637 526 aaKnown RBP eCLIP3.55□□□□□ -1.84
CXXC4-202ENST00000466963 RANP62826 216 aaKnown RBP3.55□□□□□ -1.84
CXXC4-202ENST00000466963 ZNF471Q9BX82 626 aaPredicted RBP3.55□□□□□ -1.84
CXXC4-202ENST00000466963 KRBOX1C9JBD0 128 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 TMEM262E9PQX1 116 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 NUPR1O60356 82 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 GCGP01275 180 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 REG3AQ06141 175 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 MIR17HGQ75NE6 70 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 CHCHD5Q9BSY4 110 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 TMEM243Q9BU79 118 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 EPDR1Q9UM22 224 aa3.55□□□□□ -1.84
CXXC4-202ENST00000466963 SNAI2O43623 268 aa3.54□□□□□ -1.84
CXXC4-202ENST00000466963 SCGB1D2O95969 90 aa3.54□□□□□ -1.84
CXXC4-202ENST00000466963 PRB4P10163 310 aaPredicted RBP3.54□□□□□ -1.84
CXXC4-202ENST00000466963 LSM3P62310 102 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms