RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 C14orf178Q8N769 122 aaPredicted RBP17.72■□□□□ 0.43
SMC4-206ENST00000465903 NUDT10Q8NFP7 164 aa17.72■□□□□ 0.43
SMC4-206ENST00000465903 NUDT11Q96G61 164 aa17.72■□□□□ 0.43
SMC4-206ENST00000465903 EIF5A2Q9GZV4 153 aaKnown RBP17.72■□□□□ 0.43
SMC4-206ENST00000465903 MUC21A0A0G2JKD1 596 aa17.71■□□□□ 0.43
SMC4-206ENST00000465903 MUC21A0A140T8X8 626 aa17.71■□□□□ 0.43
SMC4-206ENST00000465903 SIVA1O15304 175 aa17.71■□□□□ 0.43
SMC4-206ENST00000465903 FAM74A4Q5TZK3 123 aa17.71■□□□□ 0.43
SMC4-206ENST00000465903 SH2D6Q7Z4S9 175 aa17.71■□□□□ 0.43
SMC4-206ENST00000465903 P01737 135 aa17.7■□□□□ 0.42
SMC4-206ENST00000465903 RPS20P60866 119 aaKnown RBP17.7■□□□□ 0.42
SMC4-206ENST00000465903 SRP19P09132 144 aaKnown RBP17.69■□□□□ 0.42
SMC4-206ENST00000465903 TIRAPP58753 221 aa17.69■□□□□ 0.42
SMC4-206ENST00000465903 A0A1W2PPQ1 181 aa17.68■□□□□ 0.42
SMC4-206ENST00000465903 LINC00694P0DN24 101 aa17.68■□□□□ 0.42
SMC4-206ENST00000465903 TTC32Q5I0X7 151 aa17.68■□□□□ 0.42
SMC4-206ENST00000465903 C6orf223Q8N319 242 aa17.68■□□□□ 0.42
SMC4-206ENST00000465903 PRSS29PA6NIE9 313 aa17.67■□□□□ 0.42
SMC4-206ENST00000465903 CEBPGP53567 150 aa17.67■□□□□ 0.42
SMC4-206ENST00000465903 SPANXN1Q5VSR9 72 aa17.67■□□□□ 0.42
SMC4-206ENST00000465903 WFDC10BQ8IUB3 73 aa17.67■□□□□ 0.42
SMC4-206ENST00000465903 FER1L6-AS1Q8NA97 138 aa17.67■□□□□ 0.42
SMC4-206ENST00000465903 A0A1B0GVY2 172 aa17.66■□□□□ 0.42
SMC4-206ENST00000465903 GAGE12JA6NER3 117 aa17.66■□□□□ 0.42
SMC4-206ENST00000465903 SSTP61278 116 aa17.66■□□□□ 0.42
SMC4-206ENST00000465903 GAGE1Q13065 139 aa17.66■□□□□ 0.42
SMC4-206ENST00000465903 GAGE4Q13068 117 aa17.66■□□□□ 0.42
SMC4-206ENST00000465903 GAGE5Q13069 117 aa17.66■□□□□ 0.42
SMC4-206ENST00000465903 GAGE13Q4V321 117 aa17.66■□□□□ 0.42
SMC4-206ENST00000465903 SOHLH1Q5JUK2 328 aa17.66■□□□□ 0.42
SMC4-206ENST00000465903 ATP6V0E2Q8NHE4 81 aa17.66■□□□□ 0.42
SMC4-206ENST00000465903 RNASE7Q9H1E1 156 aaKnown RBP17.66■□□□□ 0.42
SMC4-206ENST00000465903 PKD1P98161 4303 aa17.66■□□□□ 0.42
SMC4-206ENST00000465903 KIF25-AS1Q9Y6Z4 181 aa17.64■□□□□ 0.41
SMC4-206ENST00000465903 HECTD4Q9Y4D8 3996 aa17.63■□□□□ 0.41
SMC4-206ENST00000465903 XKRY2A2RUG3 117 aa17.63■□□□□ 0.41
SMC4-206ENST00000465903 TPPP3Q9BW30 176 aa17.63■□□□□ 0.41
SMC4-206ENST00000465903 GTSF1LQ9H1H1 148 aa17.63■□□□□ 0.41
SMC4-206ENST00000465903 RPP21Q9H633 154 aaKnown RBP17.63■□□□□ 0.41
SMC4-206ENST00000465903 MSRB1Q9NZV6 116 aa17.63■□□□□ 0.41
SMC4-206ENST00000465903 LY96Q9Y6Y9 160 aa17.63■□□□□ 0.41
SMC4-206ENST00000465903 LYZL1Q6UWQ5 148 aa17.62■□□□□ 0.41
SMC4-206ENST00000465903 SMIM7Q9BQ49 75 aa17.62■□□□□ 0.41
SMC4-206ENST00000465903 C9JQL5 133 aa17.61■□□□□ 0.41
SMC4-206ENST00000465903 LINC00315P59091 139 aa17.61■□□□□ 0.41
SMC4-206ENST00000465903 RAB4BP61018 213 aa17.61■□□□□ 0.41
SMC4-206ENST00000465903 SRSF3P84103 164 aaKnown RBP17.61■□□□□ 0.41
SMC4-206ENST00000465903 ZNF727A8MUV8 499 aa17.6■□□□□ 0.41
SMC4-206ENST00000465903 F2Z2F3 143 aa17.6■□□□□ 0.41
SMC4-206ENST00000465903 DNAH10OSP0CZ25 163 aa17.6■□□□□ 0.41
SMC4-206ENST00000465903 CACNG7P62955 275 aa17.6■□□□□ 0.41
SMC4-206ENST00000465903 FAM231DQ6ZW35 169 aa17.6■□□□□ 0.41
SMC4-206ENST00000465903 DNAH11Q96DT5 4516 aa17.59■□□□□ 0.41
SMC4-206ENST00000465903 LELP1Q5T871 98 aa17.59■□□□□ 0.41
SMC4-206ENST00000465903 LINC01551Q86U37 167 aa17.59■□□□□ 0.41
SMC4-206ENST00000465903 TRBV10-1A0A0K0K1A3 114 aa17.58■□□□□ 0.4
SMC4-206ENST00000465903 BTF3P20290 206 aaKnown RBP17.58■□□□□ 0.4
SMC4-206ENST00000465903 TNP2Q05952 138 aa17.58■□□□□ 0.4
SMC4-206ENST00000465903 ZNF56Q15929 161 aa17.58■□□□□ 0.4
SMC4-206ENST00000465903 GATCO43716 136 aaKnown RBP17.57■□□□□ 0.4
SMC4-206ENST00000465903 CTRLP40313 264 aa17.57■□□□□ 0.4
SMC4-206ENST00000465903 WDR73Q6P4I2 378 aa17.57■□□□□ 0.4
SMC4-206ENST00000465903 AP1S3Q96PC3 154 aa17.57■□□□□ 0.4
SMC4-206ENST00000465903 NTF3P20783 257 aa17.56■□□□□ 0.4
SMC4-206ENST00000465903 OR10J3Q5JRS4 329 aa17.56■□□□□ 0.4
SMC4-206ENST00000465903 OR10G8Q8NGN5 311 aa17.56■□□□□ 0.4
SMC4-206ENST00000465903 GTSF1Q8WW33 167 aa17.56■□□□□ 0.4
SMC4-206ENST00000465903 TNFRSF18Q9Y5U5 241 aa17.56■□□□□ 0.4
SMC4-206ENST00000465903 TRAV8-6A0A0B4J262 113 aa17.55■□□□□ 0.4
SMC4-206ENST00000465903 IGHV3-38A0A0C4DH36 116 aa17.55■□□□□ 0.4
SMC4-206ENST00000465903 PEA15Q15121 130 aa17.55■□□□□ 0.4
SMC4-206ENST00000465903 NEXN-AS1Q8NBZ9 246 aa17.55■□□□□ 0.4
SMC4-206ENST00000465903 DYNC1H1Q14204 4646 aaKnown RBP17.55■□□□□ 0.4
SMC4-206ENST00000465903 F5H697 171 aa17.54■□□□□ 0.4
SMC4-206ENST00000465903 EVI2AP22794 236 aa17.54■□□□□ 0.4
SMC4-206ENST00000465903 ERVFC1-1P60608 527 aa17.54■□□□□ 0.4
SMC4-206ENST00000465903 UBE2D3P61077 147 aa17.54■□□□□ 0.4
SMC4-206ENST00000465903 UBE2D2P62837 147 aa17.54■□□□□ 0.4
SMC4-206ENST00000465903 RPL36AP83881 106 aaKnown RBP17.54■□□□□ 0.4
SMC4-206ENST00000465903 Q6ZRN7 208 aaPredicted RBP17.54■□□□□ 0.4
SMC4-206ENST00000465903 RPL36ALQ969Q0 106 aaKnown RBP17.54■□□□□ 0.4
SMC4-206ENST00000465903 CNFNQ9BYD5 112 aa17.54■□□□□ 0.4
SMC4-206ENST00000465903 TRBV7-3A0A075B6L6 115 aa17.53■□□□□ 0.4
SMC4-206ENST00000465903 TRAV9-2A0A087WT02 112 aa17.53■□□□□ 0.4
SMC4-206ENST00000465903 K7EP13 123 aa17.53■□□□□ 0.4
SMC4-206ENST00000465903 SMIM17P0DL12 118 aa17.53■□□□□ 0.4
SMC4-206ENST00000465903 LINC01556Q5JQF7 62 aa17.53■□□□□ 0.4
SMC4-206ENST00000465903 SMDT1Q9H4I9 107 aa17.53■□□□□ 0.4
SMC4-206ENST00000465903 FAM74A3Q4VXF1 159 aa17.52■□□□□ 0.4
SMC4-206ENST00000465903 A8MWL6 223 aa17.51■□□□□ 0.39
SMC4-206ENST00000465903 TMEM241Q24JQ0 296 aa17.51■□□□□ 0.39
SMC4-206ENST00000465903 OSTCQ9NRP0 149 aa17.51■□□□□ 0.39
SMC4-206ENST00000465903 PKHD1P08F94 4074 aa17.51■□□□□ 0.39
SMC4-206ENST00000465903 CT83Q5H943 113 aa17.5■□□□□ 0.39
SMC4-206ENST00000465903 MGPP08493 103 aa17.49■□□□□ 0.39
SMC4-206ENST00000465903 TRGC1P0CF51 173 aa17.49■□□□□ 0.39
SMC4-206ENST00000465903 FOXA3P55318 350 aaPredicted RBP17.49■□□□□ 0.39
SMC4-206ENST00000465903 RPL23P62829 140 aaKnown RBP17.49■□□□□ 0.39
SMC4-206ENST00000465903 ISOC2Q96AB3 205 aa17.49■□□□□ 0.39
SMC4-206ENST00000465903 A0A087WWC5 75 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms