RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 IGHV3-33P01772 117 aa8.28□□□□□ -1.08
XRN1-204ENST00000465074 IGHV3-30-3P0DP02 117 aa8.28□□□□□ -1.08
XRN1-204ENST00000465074 IGHV3-30-5P0DP03 117 aa8.28□□□□□ -1.08
XRN1-204ENST00000465074 MED14OSP0DP75 135 aa8.28□□□□□ -1.08
XRN1-204ENST00000465074 CENPWQ5EE01 88 aa8.28□□□□□ -1.08
XRN1-204ENST00000465074 MED9Q9NWA0 146 aa8.28□□□□□ -1.08
XRN1-204ENST00000465074 MSRB1Q9NZV6 116 aa8.28□□□□□ -1.08
XRN1-204ENST00000465074 Q9UF83 564 aa8.28□□□□□ -1.08
XRN1-204ENST00000465074 PKHD1P08F94 4074 aa8.27□□□□□ -1.09
XRN1-204ENST00000465074 RHODO00212 210 aa8.27□□□□□ -1.09
XRN1-204ENST00000465074 EREGO14944 169 aa8.27□□□□□ -1.09
XRN1-204ENST00000465074 DNAH10OSP0CZ25 163 aa8.27□□□□□ -1.09
XRN1-204ENST00000465074 FUSP35637 526 aaKnown RBP eCLIP8.27□□□□□ -1.09
XRN1-204ENST00000465074 MEF2BQ02080 365 aaPredicted RBP8.27□□□□□ -1.09
XRN1-204ENST00000465074 PIK3CD-AS1Q5SR53 167 aa8.27□□□□□ -1.09
XRN1-204ENST00000465074 NFE4Q86UQ8 179 aa8.27□□□□□ -1.09
XRN1-204ENST00000465074 C9orf62Q8N4C0 152 aa8.27□□□□□ -1.09
XRN1-204ENST00000465074 OR10AG1Q8NH19 301 aa8.27□□□□□ -1.09
XRN1-204ENST00000465074 DAZAP1Q96EP5 407 aaKnown RBP8.27□□□□□ -1.09
XRN1-204ENST00000465074 SFRP2Q96HF1 295 aa8.27□□□□□ -1.09
XRN1-204ENST00000465074 MLST8Q9BVC4 326 aa8.27□□□□□ -1.09
XRN1-204ENST00000465074 TPPP3Q9BW30 176 aa8.27□□□□□ -1.09
XRN1-204ENST00000465074 GTSF1LQ9H1H1 148 aa8.27□□□□□ -1.09
XRN1-204ENST00000465074 Q9HAA7 133 aa8.27□□□□□ -1.09
XRN1-204ENST00000465074 BTF3P20290 206 aaKnown RBP8.26□□□□□ -1.09
XRN1-204ENST00000465074 GNG4P50150 75 aa8.26□□□□□ -1.09
XRN1-204ENST00000465074 ERVFC1-1P60608 527 aa8.26□□□□□ -1.09
XRN1-204ENST00000465074 SPANXN1Q5VSR9 72 aa8.26□□□□□ -1.09
XRN1-204ENST00000465074 ALKAL2Q6UX46 152 aa8.26□□□□□ -1.09
XRN1-204ENST00000465074 C11orf52Q96A22 123 aa8.26□□□□□ -1.09
XRN1-204ENST00000465074 SCRT2Q9NQ03 307 aa8.26□□□□□ -1.09
XRN1-204ENST00000465074 PSCAO43653 123 aa8.25□□□□□ -1.09
XRN1-204ENST00000465074 PDE6DO43924 150 aa8.25□□□□□ -1.09
XRN1-204ENST00000465074 GZMBP10144 247 aa8.25□□□□□ -1.09
XRN1-204ENST00000465074 BCL2P10415 239 aa8.25□□□□□ -1.09
XRN1-204ENST00000465074 NKX2-5P52952 324 aaPredicted RBP8.25□□□□□ -1.09
XRN1-204ENST00000465074 TIRAPP58753 221 aa8.25□□□□□ -1.09
XRN1-204ENST00000465074 KRTAP10-2P60368 255 aa8.25□□□□□ -1.09
XRN1-204ENST00000465074 ZNF56Q15929 161 aa8.25□□□□□ -1.09
XRN1-204ENST00000465074 LELP1Q5T871 98 aa8.25□□□□□ -1.09
XRN1-204ENST00000465074 UFSP1Q6NVU6 142 aa8.25□□□□□ -1.09
XRN1-204ENST00000465074 Q6ZRN7 208 aaPredicted RBP8.25□□□□□ -1.09
XRN1-204ENST00000465074 C10orf126Q8N4M7 172 aa8.25□□□□□ -1.09
XRN1-204ENST00000465074 VAX2Q9UIW0 290 aa8.25□□□□□ -1.09
XRN1-204ENST00000465074 A0A1B0GVG6 124 aa8.24□□□□□ -1.09
XRN1-204ENST00000465074 F5H697 171 aa8.24□□□□□ -1.09
XRN1-204ENST00000465074 OR2D3Q8NGH3 330 aa8.24□□□□□ -1.09
XRN1-204ENST00000465074 RBFOX3A6NFN3 312 aa8.23□□□□□ -1.09
XRN1-204ENST00000465074 K7EP13 123 aa8.23□□□□□ -1.09
XRN1-204ENST00000465074 SMIM17P0DL12 118 aa8.23□□□□□ -1.09
XRN1-204ENST00000465074 CEBPGP53567 150 aa8.23□□□□□ -1.09
XRN1-204ENST00000465074 LINC01556Q5JQF7 62 aa8.23□□□□□ -1.09
XRN1-204ENST00000465074 Q8N3U1 123 aa8.23□□□□□ -1.09
XRN1-204ENST00000465074 IGLV2-8P01709 118 aa8.22□□□□□ -1.09
XRN1-204ENST00000465074 P01737 135 aa8.22□□□□□ -1.09
XRN1-204ENST00000465074 RPL36AP83881 106 aaKnown RBP8.22□□□□□ -1.09
XRN1-204ENST00000465074 RPL36ALQ969Q0 106 aaKnown RBP8.22□□□□□ -1.09
XRN1-204ENST00000465074 URGCP-MRPS24S4R325 110 aa8.22□□□□□ -1.09
XRN1-204ENST00000465074 A0A087WTM6 91 aa8.21□□□□□ -1.1
XRN1-204ENST00000465074 A0A087WWC5 75 aa8.21□□□□□ -1.1
XRN1-204ENST00000465074 IBA57-AS1B1ANH7 110 aa8.21□□□□□ -1.1
XRN1-204ENST00000465074 MGPP08493 103 aa8.21□□□□□ -1.1
XRN1-204ENST00000465074 CXCL1P09341 107 aa8.21□□□□□ -1.1
XRN1-204ENST00000465074 OR5AL1P0C617 328 aa8.21□□□□□ -1.1
XRN1-204ENST00000465074 RPS20P60866 119 aaKnown RBP8.21□□□□□ -1.1
XRN1-204ENST00000465074 RAB4BP61018 213 aa8.21□□□□□ -1.1
XRN1-204ENST00000465074 BLOC1S1P78537 153 aa8.21□□□□□ -1.1
XRN1-204ENST00000465074 FER1L6-AS1Q8NA97 138 aa8.21□□□□□ -1.1
XRN1-204ENST00000465074 TRBV20OR9-2A0A075B6H5 130 aa8.2□□□□□ -1.1
XRN1-204ENST00000465074 SNAI2O43623 268 aa8.2□□□□□ -1.1
XRN1-204ENST00000465074 LINC00694P0DN24 101 aa8.2□□□□□ -1.1
XRN1-204ENST00000465074 TAGLN2P37802 199 aaKnown RBP8.2□□□□□ -1.1
XRN1-204ENST00000465074 DAZ4Q86SG3 579 aaKnown RBP8.2□□□□□ -1.1
XRN1-204ENST00000465074 SSBP4Q9BWG4 385 aaPredicted RBP8.2□□□□□ -1.1
XRN1-204ENST00000465074 BIN3Q9NQY0 253 aa8.2□□□□□ -1.1
XRN1-204ENST00000465074 DAZ3Q9NR90 486 aaKnown RBP8.2□□□□□ -1.1
XRN1-204ENST00000465074 TRBV7-3A0A075B6L6 115 aa8.19□□□□□ -1.1
XRN1-204ENST00000465074 XKRY2A2RUG3 117 aa8.19□□□□□ -1.1
XRN1-204ENST00000465074 KCNIP4Q6PIL6 250 aa8.19□□□□□ -1.1
XRN1-204ENST00000465074 AP1S3Q96PC3 154 aa8.19□□□□□ -1.1
XRN1-204ENST00000465074 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
XRN1-204ENST00000465074 A0A087WX48 190 aa8.18□□□□□ -1.1
XRN1-204ENST00000465074 TRBV10-1A0A0K0K1A3 114 aa8.18□□□□□ -1.1
XRN1-204ENST00000465074 C19orf71A6NCJ1 209 aa8.18□□□□□ -1.1
XRN1-204ENST00000465074 TMEM262E9PQX1 116 aa8.18□□□□□ -1.1
XRN1-204ENST00000465074 UBE2D3P61077 147 aa8.18□□□□□ -1.1
XRN1-204ENST00000465074 UBE2D2P62837 147 aa8.18□□□□□ -1.1
XRN1-204ENST00000465074 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.18□□□□□ -1.1
XRN1-204ENST00000465074 NEXN-AS1Q8NBZ9 246 aa8.18□□□□□ -1.1
XRN1-204ENST00000465074 NUDT10Q8NFP7 164 aa8.18□□□□□ -1.1
XRN1-204ENST00000465074 OCC1Q8TAD7 63 aa8.18□□□□□ -1.1
XRN1-204ENST00000465074 SMIM12Q96EX1 92 aa8.18□□□□□ -1.1
XRN1-204ENST00000465074 NUDT11Q96G61 164 aa8.18□□□□□ -1.1
XRN1-204ENST00000465074 EIF5A2Q9GZV4 153 aaKnown RBP8.18□□□□□ -1.1
XRN1-204ENST00000465074 RNASE7Q9H1E1 156 aaKnown RBP8.18□□□□□ -1.1
XRN1-204ENST00000465074 DNAH11Q96DT5 4516 aa8.17□□□□□ -1.1
XRN1-204ENST00000465074 IGLC6P0CF74 106 aa8.17□□□□□ -1.1
XRN1-204ENST00000465074 CACNG7P62955 275 aa8.17□□□□□ -1.1
XRN1-204ENST00000465074 TOR2AQ5JU69 321 aa8.17□□□□□ -1.1
XRN1-204ENST00000465074 LYZL1Q6UWQ5 148 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms