RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 SLC25A29Q8N8R3 303 aa9.51□□□□□ -0.89
LIMD1-203ENST00000465039 GFRA4Q9GZZ7 299 aa9.51□□□□□ -0.89
LIMD1-203ENST00000465039 OSTCQ9NRP0 149 aa9.51□□□□□ -0.89
LIMD1-203ENST00000465039 MRPS16Q9Y3D3 137 aaKnown RBP9.51□□□□□ -0.89
LIMD1-203ENST00000465039 TRBV10-1A0A0K0K1A3 114 aa9.5□□□□□ -0.89
LIMD1-203ENST00000465039 K7EQD1 137 aa9.5□□□□□ -0.89
LIMD1-203ENST00000465039 CRYGDP07320 174 aa9.5□□□□□ -0.89
LIMD1-203ENST00000465039 GYPEP15421 78 aa9.5□□□□□ -0.89
LIMD1-203ENST00000465039 FOXA3P55318 350 aaPredicted RBP9.5□□□□□ -0.89
LIMD1-203ENST00000465039 ERVFC1-1P60608 527 aa9.5□□□□□ -0.89
LIMD1-203ENST00000465039 IFITM2Q01629 132 aa9.5□□□□□ -0.89
LIMD1-203ENST00000465039 UQCC3Q6UW78 93 aa9.5□□□□□ -0.89
LIMD1-203ENST00000465039 C15orf54Q8N8G6 183 aa9.5□□□□□ -0.89
LIMD1-203ENST00000465039 RNASE7Q9H1E1 156 aaKnown RBP9.5□□□□□ -0.89
LIMD1-203ENST00000465039 DNAH6Q9C0G6 4158 aa9.5□□□□□ -0.89
LIMD1-203ENST00000465039 C9JQL5 133 aa9.49□□□□□ -0.89
LIMD1-203ENST00000465039 GATCO43716 136 aaKnown RBP9.49□□□□□ -0.89
LIMD1-203ENST00000465039 K7EP13 123 aa9.48□□□□□ -0.89
LIMD1-203ENST00000465039 TRGC1P0CF51 173 aa9.48□□□□□ -0.89
LIMD1-203ENST00000465039 RAB4BP61018 213 aa9.48□□□□□ -0.89
LIMD1-203ENST00000465039 SRSF3P84103 164 aaKnown RBP9.48□□□□□ -0.89
LIMD1-203ENST00000465039 PNRC1Q12796 327 aaPredicted RBP9.48□□□□□ -0.89
LIMD1-203ENST00000465039 ZNRF2Q8NHG8 242 aa9.48□□□□□ -0.89
LIMD1-203ENST00000465039 TSKUQ8WUA8 353 aa9.48□□□□□ -0.89
LIMD1-203ENST00000465039 ISOC2Q96AB3 205 aa9.48□□□□□ -0.89
LIMD1-203ENST00000465039 LINC00588Q9Y4M8 146 aa9.48□□□□□ -0.89
LIMD1-203ENST00000465039 SMIM17P0DL12 118 aa9.47□□□□□ -0.89
LIMD1-203ENST00000465039 LINC00694P0DN24 101 aa9.47□□□□□ -0.89
LIMD1-203ENST00000465039 BTF3P20290 206 aaKnown RBP9.47□□□□□ -0.89
LIMD1-203ENST00000465039 RPL23P62829 140 aaKnown RBP9.47□□□□□ -0.89
LIMD1-203ENST00000465039 ESRGQ1W209 222 aa9.47□□□□□ -0.89
LIMD1-203ENST00000465039 FAM74A4Q5TZK3 123 aa9.47□□□□□ -0.89
LIMD1-203ENST00000465039 SAMD10Q9BYL1 202 aa9.47□□□□□ -0.89
LIMD1-203ENST00000465039 HYDINQ4G0P3 5121 aa9.47□□□□□ -0.89
LIMD1-203ENST00000465039 GZMBP10144 247 aa9.46□□□□□ -0.9
LIMD1-203ENST00000465039 TTC32Q5I0X7 151 aa9.46□□□□□ -0.9
LIMD1-203ENST00000465039 LYZL1Q6UWQ5 148 aa9.46□□□□□ -0.9
LIMD1-203ENST00000465039 TPPP3Q9BW30 176 aa9.46□□□□□ -0.9
LIMD1-203ENST00000465039 JPT2Q9H910 190 aa9.46□□□□□ -0.9
LIMD1-203ENST00000465039 KIF25-AS1Q9Y6Z4 181 aa9.46□□□□□ -0.9
LIMD1-203ENST00000465039 A0A087WWL8 130 aa9.45□□□□□ -0.9
LIMD1-203ENST00000465039 IGHV3-73A0A0B4J1V6 119 aa9.45□□□□□ -0.9
LIMD1-203ENST00000465039 H7C1H1 209 aa9.45□□□□□ -0.9
LIMD1-203ENST00000465039 ADIRFQ15847 76 aa9.45□□□□□ -0.9
LIMD1-203ENST00000465039 LYPD5Q6UWN5 251 aa9.45□□□□□ -0.9
LIMD1-203ENST00000465039 OR10G8Q8NGN5 311 aa9.45□□□□□ -0.9
LIMD1-203ENST00000465039 GTSF1Q8WW33 167 aa9.45□□□□□ -0.9
LIMD1-203ENST00000465039 BORCS7Q96B45 105 aa9.45□□□□□ -0.9
LIMD1-203ENST00000465039 KMT2AQ03164 3969 aa9.45□□□□□ -0.9
LIMD1-203ENST00000465039 A0A087WWC5 75 aa9.44□□□□□ -0.9
LIMD1-203ENST00000465039 Q6ZR54 194 aa9.44□□□□□ -0.9
LIMD1-203ENST00000465039 Q6ZSN1 163 aa9.44□□□□□ -0.9
LIMD1-203ENST00000465039 FRZBQ92765 325 aa9.44□□□□□ -0.9
LIMD1-203ENST00000465039 V9GYV3 84 aa9.44□□□□□ -0.9
LIMD1-203ENST00000465039 PPP1R2P9O14990 202 aa9.43□□□□□ -0.9
LIMD1-203ENST00000465039 NTF3P20783 257 aa9.43□□□□□ -0.9
LIMD1-203ENST00000465039 LINC00315P59091 139 aa9.43□□□□□ -0.9
LIMD1-203ENST00000465039 RPL36AP83881 106 aaKnown RBP9.43□□□□□ -0.9
LIMD1-203ENST00000465039 ZNF56Q15929 161 aa9.43□□□□□ -0.9
LIMD1-203ENST00000465039 SMIM15Q7Z3B0 74 aa9.43□□□□□ -0.9
LIMD1-203ENST00000465039 C14orf178Q8N769 122 aaPredicted RBP9.43□□□□□ -0.9
LIMD1-203ENST00000465039 RPL36ALQ969Q0 106 aaKnown RBP9.43□□□□□ -0.9
LIMD1-203ENST00000465039 GTSF1LQ9H1H1 148 aa9.43□□□□□ -0.9
LIMD1-203ENST00000465039 DPH3P1Q9H4G8 78 aa9.43□□□□□ -0.9
LIMD1-203ENST00000465039 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
LIMD1-203ENST00000465039 NBDYA0A0U1RRE5 68 aa9.42□□□□□ -0.9
LIMD1-203ENST00000465039 A0A1B0GUT8 65 aa9.42□□□□□ -0.9
LIMD1-203ENST00000465039 HIGD1CA8MV81 97 aa9.42□□□□□ -0.9
LIMD1-203ENST00000465039 ATP6V0E2Q8NHE4 81 aa9.42□□□□□ -0.9
LIMD1-203ENST00000465039 Q9H8V8 135 aa9.42□□□□□ -0.9
LIMD1-203ENST00000465039 NAT8BQ9UHF3 227 aa9.42□□□□□ -0.9
LIMD1-203ENST00000465039 MUC21A0A0G2JKD1 596 aa9.41□□□□□ -0.9
LIMD1-203ENST00000465039 LOC100131303A0A0U1RQF7 123 aa9.41□□□□□ -0.9
LIMD1-203ENST00000465039 MUC21A0A140T8X8 626 aa9.41□□□□□ -0.9
LIMD1-203ENST00000465039 A0A1B0GW15 77 aa9.41□□□□□ -0.9
LIMD1-203ENST00000465039 SIVA1O15304 175 aa9.41□□□□□ -0.9
LIMD1-203ENST00000465039 TWIST1Q15672 202 aa9.41□□□□□ -0.9
LIMD1-203ENST00000465039 LELP1Q5T871 98 aa9.41□□□□□ -0.9
LIMD1-203ENST00000465039 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.41□□□□□ -0.9
LIMD1-203ENST00000465039 DNAJC30Q96LL9 226 aa9.41□□□□□ -0.9
LIMD1-203ENST00000465039 MSRB1Q9NZV6 116 aa9.41□□□□□ -0.9
LIMD1-203ENST00000465039 SMIM27A0A1W2PRY6 76 aa9.4□□□□□ -0.9
LIMD1-203ENST00000465039 LINC00862A6NCI5 91 aa9.4□□□□□ -0.9
LIMD1-203ENST00000465039 F5H697 171 aa9.4□□□□□ -0.9
LIMD1-203ENST00000465039 DNAH10OSP0CZ25 163 aa9.4□□□□□ -0.9
LIMD1-203ENST00000465039 EVI2AP22794 236 aa9.4□□□□□ -0.9
LIMD1-203ENST00000465039 UBE2D3P61077 147 aa9.4□□□□□ -0.9
LIMD1-203ENST00000465039 UBE2D2P62837 147 aa9.4□□□□□ -0.9
LIMD1-203ENST00000465039 TMEM97Q5BJF2 176 aa9.4□□□□□ -0.9
LIMD1-203ENST00000465039 TRAV9-2A0A087WT02 112 aa9.39□□□□□ -0.91
LIMD1-203ENST00000465039 TRAV8-6A0A0B4J262 113 aa9.39□□□□□ -0.91
LIMD1-203ENST00000465039 TMEM218A2RU14 115 aa9.39□□□□□ -0.91
LIMD1-203ENST00000465039 M0QY20 66 aa9.39□□□□□ -0.91
LIMD1-203ENST00000465039 LINC00336Q6ZUF6 198 aa9.39□□□□□ -0.91
LIMD1-203ENST00000465039 C10orf126Q8N4M7 172 aa9.39□□□□□ -0.91
LIMD1-203ENST00000465039 PGLYRP4Q96LB8 373 aa9.39□□□□□ -0.91
LIMD1-203ENST00000465039 GAGE12JA6NER3 117 aa9.38□□□□□ -0.91
LIMD1-203ENST00000465039 MT-ND4LP03901 98 aa9.38□□□□□ -0.91
LIMD1-203ENST00000465039 S100A8P05109 93 aa9.38□□□□□ -0.91
LIMD1-203ENST00000465039 GAGE1Q13065 139 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms