RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 TRAV34A0A0B4J273 112 aa9.47□□□□□ -0.89
MCF2L-220ENST00000464800 FABP5P3A8MUU1 101 aa9.47□□□□□ -0.89
MCF2L-220ENST00000464800 RHODO00212 210 aa9.47□□□□□ -0.89
MCF2L-220ENST00000464800 ASIPP42127 132 aa9.47□□□□□ -0.89
MCF2L-220ENST00000464800 Q0VG73 95 aa9.47□□□□□ -0.89
MCF2L-220ENST00000464800 RGS21Q2M5E4 152 aa9.47□□□□□ -0.89
MCF2L-220ENST00000464800 DMRTA1Q5VZB9 504 aa9.47□□□□□ -0.89
MCF2L-220ENST00000464800 DAZAP1Q96EP5 407 aaKnown RBP9.47□□□□□ -0.89
MCF2L-220ENST00000464800 AQP10Q96PS8 301 aa9.47□□□□□ -0.89
MCF2L-220ENST00000464800 JPT2Q9H910 190 aa9.47□□□□□ -0.89
MCF2L-220ENST00000464800 TNFSF18Q9UNG2 199 aa9.47□□□□□ -0.89
MCF2L-220ENST00000464800 ALG5Q9Y673 324 aa9.47□□□□□ -0.89
MCF2L-220ENST00000464800 A0A1W2PRE2 83 aa9.46□□□□□ -0.9
MCF2L-220ENST00000464800 C1orf43Q9BWL3 253 aa9.46□□□□□ -0.9
MCF2L-220ENST00000464800 ARL2-SNX15V9GYD0 113 aa9.46□□□□□ -0.9
MCF2L-220ENST00000464800 IFNA7P01567 189 aa9.45□□□□□ -0.9
MCF2L-220ENST00000464800 FAM74A4Q5TZK3 123 aa9.45□□□□□ -0.9
MCF2L-220ENST00000464800 IL36BQ9NZH7 164 aa9.45□□□□□ -0.9
MCF2L-220ENST00000464800 B4DEV8 164 aa9.44□□□□□ -0.9
MCF2L-220ENST00000464800 H3BVH4 76 aa9.44□□□□□ -0.9
MCF2L-220ENST00000464800 CRPP02741 224 aa9.44□□□□□ -0.9
MCF2L-220ENST00000464800 MT1HL1P0DM35 61 aa9.43□□□□□ -0.9
MCF2L-220ENST00000464800 UBE2G2P60604 165 aa9.43□□□□□ -0.9
MCF2L-220ENST00000464800 ZNF726P1Q15940 193 aa9.43□□□□□ -0.9
MCF2L-220ENST00000464800 Q5BKY6 102 aa9.43□□□□□ -0.9
MCF2L-220ENST00000464800 PKHD1L1Q86WI1 4243 aa9.43□□□□□ -0.9
MCF2L-220ENST00000464800 KRBOX1C9JBD0 128 aa9.42□□□□□ -0.9
MCF2L-220ENST00000464800 USP17L23D6RBM5 183 aa9.42□□□□□ -0.9
MCF2L-220ENST00000464800 PEX7O00628 323 aa9.42□□□□□ -0.9
MCF2L-220ENST00000464800 HLA-DQA1P01909 254 aa9.42□□□□□ -0.9
MCF2L-220ENST00000464800 ARMS2P0C7Q2 107 aa9.42□□□□□ -0.9
MCF2L-220ENST00000464800 CRIP1P50238 77 aa9.42□□□□□ -0.9
MCF2L-220ENST00000464800 DNLZQ5SXM8 178 aa9.42□□□□□ -0.9
MCF2L-220ENST00000464800 RPL7L1Q6DKI1 246 aaKnown RBP9.42□□□□□ -0.9
MCF2L-220ENST00000464800 Q86TA4 180 aa9.42□□□□□ -0.9
MCF2L-220ENST00000464800 OR11H4Q8NGC9 324 aa9.42□□□□□ -0.9
MCF2L-220ENST00000464800 MED28Q9H204 178 aa9.42□□□□□ -0.9
MCF2L-220ENST00000464800 A0A087WWL8 130 aa9.41□□□□□ -0.9
MCF2L-220ENST00000464800 GRIFINA4D1Z8 144 aa9.41□□□□□ -0.9
MCF2L-220ENST00000464800 TMEM262E9PQX1 116 aa9.41□□□□□ -0.9
MCF2L-220ENST00000464800 M0R036 132 aa9.41□□□□□ -0.9
MCF2L-220ENST00000464800 RPL36AP83881 106 aaKnown RBP9.41□□□□□ -0.9
MCF2L-220ENST00000464800 ENHOQ6UWT2 76 aa9.41□□□□□ -0.9
MCF2L-220ENST00000464800 Q6ZRU5 148 aa9.41□□□□□ -0.9
MCF2L-220ENST00000464800 C15orf54Q8N8G6 183 aa9.41□□□□□ -0.9
MCF2L-220ENST00000464800 INO80EQ8NBZ0 244 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-220ENST00000464800 RPL36ALQ969Q0 106 aaKnown RBP9.41□□□□□ -0.9
MCF2L-220ENST00000464800 ZC2HC1AQ96GY0 325 aa9.41□□□□□ -0.9
MCF2L-220ENST00000464800 BORCS7-ASMTA0A0B4J1R7 106 aa9.4□□□□□ -0.9
MCF2L-220ENST00000464800 TRBV10-1A0A0K0K1A3 114 aa9.4□□□□□ -0.9
MCF2L-220ENST00000464800 CTXND1A0A1B0GTU2 59 aa9.4□□□□□ -0.9
MCF2L-220ENST00000464800 FAM74A7A6NL05 159 aa9.4□□□□□ -0.9
MCF2L-220ENST00000464800 SH2D1AO60880 128 aa9.4□□□□□ -0.9
MCF2L-220ENST00000464800 UBE2D3P61077 147 aa9.4□□□□□ -0.9
MCF2L-220ENST00000464800 UBE2D2P62837 147 aa9.4□□□□□ -0.9
MCF2L-220ENST00000464800 DGAT2L7PQ6IED9 249 aa9.4□□□□□ -0.9
MCF2L-220ENST00000464800 HIST1H2BAQ96A08 127 aa9.4□□□□□ -0.9
MCF2L-220ENST00000464800 SFRP2Q96HF1 295 aa9.4□□□□□ -0.9
MCF2L-220ENST00000464800 NKX6-2Q9C056 277 aaPredicted RBP9.4□□□□□ -0.9
MCF2L-220ENST00000464800 ZFP30Q9Y2G7 519 aa9.4□□□□□ -0.9
MCF2L-220ENST00000464800 PHLDA3Q9Y5J5 127 aa9.4□□□□□ -0.9
MCF2L-220ENST00000464800 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.4□□□□□ -0.9
MCF2L-220ENST00000464800 TRBV7-3A0A075B6L6 115 aa9.39□□□□□ -0.91
MCF2L-220ENST00000464800 ANGP03950 147 aaKnown RBP9.39□□□□□ -0.91
MCF2L-220ENST00000464800 PRSS1P07477 247 aa9.39□□□□□ -0.91
MCF2L-220ENST00000464800 MPV17L2Q567V2 206 aa9.39□□□□□ -0.91
MCF2L-220ENST00000464800 FAM162BQ5T6X4 162 aa9.39□□□□□ -0.91
MCF2L-220ENST00000464800 COX8CQ7Z4L0 72 aa9.39□□□□□ -0.91
MCF2L-220ENST00000464800 C9orf163Q8N9P6 203 aa9.39□□□□□ -0.91
MCF2L-220ENST00000464800 TRBV6-8A0A0A6YYG3 113 aa9.38□□□□□ -0.91
MCF2L-220ENST00000464800 A0A0D9SG52 128 aa9.38□□□□□ -0.91
MCF2L-220ENST00000464800 M0R381 172 aa9.38□□□□□ -0.91
MCF2L-220ENST00000464800 TPT1P13693 172 aaKnown RBP9.38□□□□□ -0.91
MCF2L-220ENST00000464800 FXYD6-FXYD2A0A087WZ82 144 aa9.37□□□□□ -0.91
MCF2L-220ENST00000464800 TMSB15BA0A087X1C1 80 aa9.37□□□□□ -0.91
MCF2L-220ENST00000464800 GIPP09681 153 aaPredicted RBP9.37□□□□□ -0.91
MCF2L-220ENST00000464800 UBE2G1P62253 170 aa9.37□□□□□ -0.91
MCF2L-220ENST00000464800 RPL19P84098 196 aaKnown RBP9.37□□□□□ -0.91
MCF2L-220ENST00000464800 MIAQ16674 131 aa9.37□□□□□ -0.91
MCF2L-220ENST00000464800 ZNF674Q2M3X9 581 aa9.37□□□□□ -0.91
MCF2L-220ENST00000464800 AKR1C8PQ5T2L2 129 aa9.37□□□□□ -0.91
MCF2L-220ENST00000464800 FMC1Q96HJ9 113 aa9.37□□□□□ -0.91
MCF2L-220ENST00000464800 PANO1I0J062 215 aa9.36□□□□□ -0.91
MCF2L-220ENST00000464800 PKIAP61925 76 aa9.36□□□□□ -0.91
MCF2L-220ENST00000464800 LINC01559Q495D7 138 aa9.36□□□□□ -0.91
MCF2L-220ENST00000464800 ZFP82Q8N141 532 aa9.36□□□□□ -0.91
MCF2L-220ENST00000464800 OR10G8Q8NGN5 311 aa9.36□□□□□ -0.91
MCF2L-220ENST00000464800 TRBV6-1A0A0K0K1D8 114 aa9.35□□□□□ -0.91
MCF2L-220ENST00000464800 CHCHD5Q9BSY4 110 aa9.35□□□□□ -0.91
MCF2L-220ENST00000464800 MAP1LC3B2A6NCE7 125 aa9.34□□□□□ -0.91
MCF2L-220ENST00000464800 LTAP01374 205 aa9.34□□□□□ -0.91
MCF2L-220ENST00000464800 CST9LP1Q5W188 147 aa9.34□□□□□ -0.91
MCF2L-220ENST00000464800 SDIM1Q6ZPB5 146 aa9.34□□□□□ -0.91
MCF2L-220ENST00000464800 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.34□□□□□ -0.91
MCF2L-220ENST00000464800 MAP1LC3BQ9GZQ8 125 aa9.34□□□□□ -0.91
MCF2L-220ENST00000464800 FHITP49789 147 aa9.33□□□□□ -0.92
MCF2L-220ENST00000464800 ZNF56Q15929 161 aa9.33□□□□□ -0.92
MCF2L-220ENST00000464800 CLPSL2Q6UWE3 100 aa9.33□□□□□ -0.92
MCF2L-220ENST00000464800 NEXN-AS1Q8NBZ9 246 aa9.33□□□□□ -0.92
MCF2L-220ENST00000464800 TCEAL7Q9BRU2 100 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms