RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 ZNF575Q86XF7 245 aa5.34□□□□□ -1.55
CDKL5-203ENST00000463994 PRR15Q8IV56 129 aa5.34□□□□□ -1.55
CDKL5-203ENST00000463994 IGHV1-69DA0A0B4J2H0 117 aa5.33□□□□□ -1.56
CDKL5-203ENST00000463994 TIMM17BO60830 172 aa5.33□□□□□ -1.56
CDKL5-203ENST00000463994 MRPL33O75394 65 aaKnown RBP5.33□□□□□ -1.56
CDKL5-203ENST00000463994 SUMO2P61956 95 aaKnown RBP5.33□□□□□ -1.56
CDKL5-203ENST00000463994 UBE2D4Q9Y2X8 147 aa5.33□□□□□ -1.56
CDKL5-203ENST00000463994 TRBV7-6A0A0J9YX20 115 aa5.33□□□□□ -1.56
CDKL5-203ENST00000463994 IGHV3-64DA0A0J9YX35 117 aa5.33□□□□□ -1.56
CDKL5-203ENST00000463994 TRGV3P03979 118 aa5.33□□□□□ -1.56
CDKL5-203ENST00000463994 IGKV1-16P04430 117 aa5.33□□□□□ -1.56
CDKL5-203ENST00000463994 CCKP06307 115 aa5.33□□□□□ -1.56
CDKL5-203ENST00000463994 MAGEA5P43359 124 aa5.33□□□□□ -1.56
CDKL5-203ENST00000463994 TNP2Q05952 138 aa5.33□□□□□ -1.56
CDKL5-203ENST00000463994 SS18Q15532 418 aa5.33□□□□□ -1.56
CDKL5-203ENST00000463994 LYPD5Q6UWN5 251 aa5.33□□□□□ -1.56
CDKL5-203ENST00000463994 LINC00474Q9P2X8 69 aa5.33□□□□□ -1.56
CDKL5-203ENST00000463994 PIEZO1Q92508 2521 aa5.33□□□□□ -1.56
CDKL5-203ENST00000463994 DNAL4O96015 105 aa5.32□□□□□ -1.56
CDKL5-203ENST00000463994 BAALC-AS2P0C853 105 aa5.32□□□□□ -1.56
CDKL5-203ENST00000463994 ZNF80P51504 273 aaPredicted RBP5.32□□□□□ -1.56
CDKL5-203ENST00000463994 PDE6HQ13956 83 aa5.32□□□□□ -1.56
CDKL5-203ENST00000463994 TNCP24821 2201 aa5.32□□□□□ -1.56
CDKL5-203ENST00000463994 ASXL3Q9C0F0 2248 aa5.32□□□□□ -1.56
CDKL5-203ENST00000463994 IGHV3-9P01782 118 aa5.32□□□□□ -1.56
CDKL5-203ENST00000463994 TFF1P04155 84 aa5.32□□□□□ -1.56
CDKL5-203ENST00000463994 PRB4P10163 310 aaPredicted RBP5.32□□□□□ -1.56
CDKL5-203ENST00000463994 ATP5EP56381 51 aaPredicted RBP5.32□□□□□ -1.56
CDKL5-203ENST00000463994 SNRPD3P62318 126 aaKnown RBP5.32□□□□□ -1.56
CDKL5-203ENST00000463994 RBM3P98179 157 aaKnown RBP5.32□□□□□ -1.56
CDKL5-203ENST00000463994 TRAV12-3A0A0B4J271 114 aa5.31□□□□□ -1.56
CDKL5-203ENST00000463994 A0A0J9YXY3 114 aa5.31□□□□□ -1.56
CDKL5-203ENST00000463994 E7EUB6 86 aa5.31□□□□□ -1.56
CDKL5-203ENST00000463994 CFHR3Q02985 330 aa5.31□□□□□ -1.56
CDKL5-203ENST00000463994 TMEM61Q8N0U2 210 aa5.31□□□□□ -1.56
CDKL5-203ENST00000463994 TMEM141Q96I45 108 aa5.31□□□□□ -1.56
CDKL5-203ENST00000463994 PSMG3-AS1Q96PY0 264 aa5.31□□□□□ -1.56
CDKL5-203ENST00000463994 X6R8D5 127 aa5.31□□□□□ -1.56
CDKL5-203ENST00000463994 SZT2Q5T011 3432 aa5.31□□□□□ -1.56
CDKL5-203ENST00000463994 PLAC8L1A1L4L8 177 aa5.31□□□□□ -1.56
CDKL5-203ENST00000463994 M0R1W7 72 aa5.31□□□□□ -1.56
CDKL5-203ENST00000463994 CCL24O00175 119 aa5.31□□□□□ -1.56
CDKL5-203ENST00000463994 COX7A2LO14548 114 aa5.31□□□□□ -1.56
CDKL5-203ENST00000463994 LOXP28300 417 aaPredicted RBP5.31□□□□□ -1.56
CDKL5-203ENST00000463994 MRPL55Q7Z7F7 128 aaKnown RBP5.31□□□□□ -1.56
CDKL5-203ENST00000463994 SPTBN5Q9NRC6 3674 aaKnown RBP5.3□□□□□ -1.56
CDKL5-203ENST00000463994 IGKV2-40A0A087WW87 121 aaPredicted RBP5.3□□□□□ -1.56
CDKL5-203ENST00000463994 LY6G6EA0A0G2JKS1 128 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 H3BS24 57 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 IGKV2D-40P01614 121 aaPredicted RBP5.3□□□□□ -1.56
CDKL5-203ENST00000463994 LPAL2Q16609 132 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 ZNF826PQ6ZT77 177 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 TMEM167AQ8TBQ9 72 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 LEAP2Q969E1 77 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 U3KQA8 63 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 COL6A3P12111 3177 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 PI4KAP42356 2102 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 ZNF503-AS2A6NEH8 195 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 IGIPA6NJ69 53 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 H3BRN7 92 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 PAX4O43316 350 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 TSHBP01222 138 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 RFPL3SP0C7P2 107 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 FOLR3P41439 243 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 KLKP1Q107X0 134 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 ZNF876PQ49A33 203 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 RUSC1-AS1Q66K80 236 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 U3KQE9 123 aa5.3□□□□□ -1.56
CDKL5-203ENST00000463994 CD59P13987 128 aa5.29□□□□□ -1.56
CDKL5-203ENST00000463994 SAA4P35542 130 aa5.29□□□□□ -1.56
CDKL5-203ENST00000463994 RNF7Q9UBF6 113 aa5.29□□□□□ -1.56
CDKL5-203ENST00000463994 MOB4Q9Y3A3 225 aa5.29□□□□□ -1.56
CDKL5-203ENST00000463994 IGHV4-4A0A075B6R2 117 aa5.29□□□□□ -1.56
CDKL5-203ENST00000463994 PCNX2A6NKB5 2137 aa5.29□□□□□ -1.56
CDKL5-203ENST00000463994 BCE1O60756 84 aa5.29□□□□□ -1.56
CDKL5-203ENST00000463994 C10orf55Q5SWW7 151 aa5.29□□□□□ -1.56
CDKL5-203ENST00000463994 ADAMTSL4-AS1Q5T5F5 129 aa5.29□□□□□ -1.56
CDKL5-203ENST00000463994 SPANXN1Q5VSR9 72 aa5.29□□□□□ -1.56
CDKL5-203ENST00000463994 PVRIGQ6DKI7 326 aa5.29□□□□□ -1.56
CDKL5-203ENST00000463994 TIMM17AQ99595 171 aa5.29□□□□□ -1.56
CDKL5-203ENST00000463994 LITAFQ99732 161 aa5.29□□□□□ -1.56
CDKL5-203ENST00000463994 A0A0A0MQY5 61 aa5.28□□□□□ -1.56
CDKL5-203ENST00000463994 NDUFC1O43677 76 aa5.28□□□□□ -1.56
CDKL5-203ENST00000463994 NXPH4O95158 308 aa5.28□□□□□ -1.56
CDKL5-203ENST00000463994 PPP1R17O96001 155 aa5.28□□□□□ -1.56
CDKL5-203ENST00000463994 VPREB1P12018 145 aa5.28□□□□□ -1.56
CDKL5-203ENST00000463994 MIAQ16674 131 aa5.28□□□□□ -1.56
CDKL5-203ENST00000463994 Q6ZSV7 163 aa5.28□□□□□ -1.56
CDKL5-203ENST00000463994 DEFB124Q8NES8 71 aa5.28□□□□□ -1.56
CDKL5-203ENST00000463994 Q8TAT8 98 aa5.28□□□□□ -1.56
CDKL5-203ENST00000463994 C5orf42Q9H799 3197 aa5.28□□□□□ -1.56
CDKL5-203ENST00000463994 BEAN1Q3B7T3 259 aa5.28□□□□□ -1.56
CDKL5-203ENST00000463994 HCP5Q6MZN7 132 aa5.28□□□□□ -1.56
CDKL5-203ENST00000463994 LINC00846Q9NV44 126 aa5.28□□□□□ -1.56
CDKL5-203ENST00000463994 C22orf24Q9Y442 160 aa5.28□□□□□ -1.56
CDKL5-203ENST00000463994 SVILO95425 2214 aa5.28□□□□□ -1.56
CDKL5-203ENST00000463994 TRAV7A0A075B6U4 112 aa5.27□□□□□ -1.57
CDKL5-203ENST00000463994 M0R381 172 aa5.27□□□□□ -1.57
CDKL5-203ENST00000463994 MSMPQ1L6U9 139 aa5.27□□□□□ -1.57
CDKL5-203ENST00000463994 ATP5EP2Q5VTU8 51 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 186.8 ms