RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 M0R381 172 aa9.47□□□□□ -0.89
SEMA3D-203ENST00000463315 IGLC6P0CF74 106 aa9.47□□□□□ -0.89
SEMA3D-203ENST00000463315 TIRAPP58753 221 aa9.47□□□□□ -0.89
SEMA3D-203ENST00000463315 PEA15Q15121 130 aa9.47□□□□□ -0.89
SEMA3D-203ENST00000463315 WDR73Q6P4I2 378 aa9.47□□□□□ -0.89
SEMA3D-203ENST00000463315 FAM231DQ6ZW35 169 aa9.47□□□□□ -0.89
SEMA3D-203ENST00000463315 SMIM7Q9BQ49 75 aa9.47□□□□□ -0.89
SEMA3D-203ENST00000463315 K7EN84 100 aa9.46□□□□□ -0.9
SEMA3D-203ENST00000463315 CRYGDP07320 174 aa9.46□□□□□ -0.9
SEMA3D-203ENST00000463315 SPANXN1Q5VSR9 72 aa9.46□□□□□ -0.9
SEMA3D-203ENST00000463315 LYPD5Q6UWN5 251 aa9.46□□□□□ -0.9
SEMA3D-203ENST00000463315 Q6ZR54 194 aa9.46□□□□□ -0.9
SEMA3D-203ENST00000463315 FER1L6-AS1Q8NA97 138 aa9.46□□□□□ -0.9
SEMA3D-203ENST00000463315 NUDT10Q8NFP7 164 aa9.46□□□□□ -0.9
SEMA3D-203ENST00000463315 NUDT11Q96G61 164 aa9.46□□□□□ -0.9
SEMA3D-203ENST00000463315 Q9H8V8 135 aa9.46□□□□□ -0.9
SEMA3D-203ENST00000463315 NACAE9PAV3 2078 aa9.46□□□□□ -0.9
SEMA3D-203ENST00000463315 ZNF727A8MUV8 499 aa9.45□□□□□ -0.9
SEMA3D-203ENST00000463315 K7EP13 123 aa9.45□□□□□ -0.9
SEMA3D-203ENST00000463315 BTF3P20290 206 aaKnown RBP9.45□□□□□ -0.9
SEMA3D-203ENST00000463315 RAB14P61106 215 aa9.45□□□□□ -0.9
SEMA3D-203ENST00000463315 CACNG7P62955 275 aa9.45□□□□□ -0.9
SEMA3D-203ENST00000463315 OR10AG1Q8NH19 301 aa9.45□□□□□ -0.9
SEMA3D-203ENST00000463315 RPP21Q9H633 154 aaKnown RBP9.45□□□□□ -0.9
SEMA3D-203ENST00000463315 DNAH6Q9C0G6 4158 aa9.45□□□□□ -0.9
SEMA3D-203ENST00000463315 TRBV10-1A0A0K0K1A3 114 aa9.44□□□□□ -0.9
SEMA3D-203ENST00000463315 CT83Q5H943 113 aa9.44□□□□□ -0.9
SEMA3D-203ENST00000463315 TTC32Q5I0X7 151 aa9.44□□□□□ -0.9
SEMA3D-203ENST00000463315 LINC01551Q86U37 167 aa9.44□□□□□ -0.9
SEMA3D-203ENST00000463315 CNFNQ9BYD5 112 aa9.44□□□□□ -0.9
SEMA3D-203ENST00000463315 SAMD10Q9BYL1 202 aa9.44□□□□□ -0.9
SEMA3D-203ENST00000463315 JPT2Q9H910 190 aa9.44□□□□□ -0.9
SEMA3D-203ENST00000463315 IGHV3-73A0A0B4J1V6 119 aa9.43□□□□□ -0.9
SEMA3D-203ENST00000463315 NBDYA0A0U1RRE5 68 aa9.43□□□□□ -0.9
SEMA3D-203ENST00000463315 CTRLP40313 264 aa9.43□□□□□ -0.9
SEMA3D-203ENST00000463315 CEBPGP53567 150 aa9.43□□□□□ -0.9
SEMA3D-203ENST00000463315 RAB4BP61018 213 aa9.43□□□□□ -0.9
SEMA3D-203ENST00000463315 LINC00336Q6ZUF6 198 aa9.43□□□□□ -0.9
SEMA3D-203ENST00000463315 AP1S3Q96PC3 154 aa9.43□□□□□ -0.9
SEMA3D-203ENST00000463315 RNASE7Q9H1E1 156 aaKnown RBP9.43□□□□□ -0.9
SEMA3D-203ENST00000463315 A0A087WWL8 130 aa9.42□□□□□ -0.9
SEMA3D-203ENST00000463315 FAM231BA6NCW3 169 aa9.42□□□□□ -0.9
SEMA3D-203ENST00000463315 A8MWL6 223 aa9.42□□□□□ -0.9
SEMA3D-203ENST00000463315 FOXA3P55318 350 aaPredicted RBP9.42□□□□□ -0.9
SEMA3D-203ENST00000463315 TMEM241Q24JQ0 296 aa9.42□□□□□ -0.9
SEMA3D-203ENST00000463315 FAM74A4Q5TZK3 123 aa9.42□□□□□ -0.9
SEMA3D-203ENST00000463315 Q6ZSN1 163 aa9.42□□□□□ -0.9
SEMA3D-203ENST00000463315 IGLV2-18A0A075B6J9 118 aa9.41□□□□□ -0.9
SEMA3D-203ENST00000463315 LOC100131303A0A0U1RQF7 123 aa9.41□□□□□ -0.9
SEMA3D-203ENST00000463315 SIVA1O15304 175 aa9.41□□□□□ -0.9
SEMA3D-203ENST00000463315 GATCO43716 136 aaKnown RBP9.41□□□□□ -0.9
SEMA3D-203ENST00000463315 SMIM17P0DL12 118 aa9.41□□□□□ -0.9
SEMA3D-203ENST00000463315 LINC00694P0DN24 101 aa9.41□□□□□ -0.9
SEMA3D-203ENST00000463315 GZMBP10144 247 aa9.41□□□□□ -0.9
SEMA3D-203ENST00000463315 ERVFC1-1P60608 527 aa9.41□□□□□ -0.9
SEMA3D-203ENST00000463315 SOHLH1Q5JUK2 328 aa9.41□□□□□ -0.9
SEMA3D-203ENST00000463315 CLLU1Q5K131 121 aa9.41□□□□□ -0.9
SEMA3D-203ENST00000463315 LYZL1Q6UWQ5 148 aa9.41□□□□□ -0.9
SEMA3D-203ENST00000463315 GFRA4Q9GZZ7 299 aa9.41□□□□□ -0.9
SEMA3D-203ENST00000463315 GTSF1LQ9H1H1 148 aa9.41□□□□□ -0.9
SEMA3D-203ENST00000463315 OSTCQ9NRP0 149 aa9.41□□□□□ -0.9
SEMA3D-203ENST00000463315 EREGO14944 169 aa9.4□□□□□ -0.9
SEMA3D-203ENST00000463315 TRGC1P0CF51 173 aa9.4□□□□□ -0.9
SEMA3D-203ENST00000463315 ATP6V0E2Q8NHE4 81 aa9.4□□□□□ -0.9
SEMA3D-203ENST00000463315 TPPP3Q9BW30 176 aa9.4□□□□□ -0.9
SEMA3D-203ENST00000463315 NAT8Q9UHE5 227 aa9.4□□□□□ -0.9
SEMA3D-203ENST00000463315 KIF25-AS1Q9Y6Z4 181 aa9.4□□□□□ -0.9
SEMA3D-203ENST00000463315 A0A087WWC5 75 aa9.39□□□□□ -0.91
SEMA3D-203ENST00000463315 C9JQL5 133 aa9.39□□□□□ -0.91
SEMA3D-203ENST00000463315 M0R2N4 97 aa9.39□□□□□ -0.91
SEMA3D-203ENST00000463315 SRSF3P84103 164 aaKnown RBP9.39□□□□□ -0.91
SEMA3D-203ENST00000463315 C1orf134Q5TEV5 83 aa9.39□□□□□ -0.91
SEMA3D-203ENST00000463315 C14orf178Q8N769 122 aaPredicted RBP9.39□□□□□ -0.91
SEMA3D-203ENST00000463315 C15orf54Q8N8G6 183 aa9.39□□□□□ -0.91
SEMA3D-203ENST00000463315 OR10G8Q8NGN5 311 aa9.39□□□□□ -0.91
SEMA3D-203ENST00000463315 TRBV7-3A0A075B6L6 115 aa9.38□□□□□ -0.91
SEMA3D-203ENST00000463315 TRAV9-2A0A087WT02 112 aa9.38□□□□□ -0.91
SEMA3D-203ENST00000463315 NTF3P20783 257 aa9.38□□□□□ -0.91
SEMA3D-203ENST00000463315 LINC00315P59091 139 aa9.38□□□□□ -0.91
SEMA3D-203ENST00000463315 RPL36AP83881 106 aaKnown RBP9.38□□□□□ -0.91
SEMA3D-203ENST00000463315 ZNF56Q15929 161 aa9.38□□□□□ -0.91
SEMA3D-203ENST00000463315 LELP1Q5T871 98 aa9.38□□□□□ -0.91
SEMA3D-203ENST00000463315 TSKUQ8WUA8 353 aa9.38□□□□□ -0.91
SEMA3D-203ENST00000463315 RPL36ALQ969Q0 106 aaKnown RBP9.38□□□□□ -0.91
SEMA3D-203ENST00000463315 ISOC2Q96AB3 205 aa9.38□□□□□ -0.91
SEMA3D-203ENST00000463315 TRAV8-6A0A0B4J262 113 aa9.37□□□□□ -0.91
SEMA3D-203ENST00000463315 MUC21A0A0G2JKD1 596 aa9.37□□□□□ -0.91
SEMA3D-203ENST00000463315 MUC21A0A140T8X8 626 aa9.37□□□□□ -0.91
SEMA3D-203ENST00000463315 GAGE12JA6NER3 117 aa9.37□□□□□ -0.91
SEMA3D-203ENST00000463315 H7C1H1 209 aa9.37□□□□□ -0.91
SEMA3D-203ENST00000463315 DNAH10OSP0CZ25 163 aa9.37□□□□□ -0.91
SEMA3D-203ENST00000463315 RPL23P62829 140 aaKnown RBP9.37□□□□□ -0.91
SEMA3D-203ENST00000463315 GAGE1Q13065 139 aa9.37□□□□□ -0.91
SEMA3D-203ENST00000463315 GAGE4Q13068 117 aa9.37□□□□□ -0.91
SEMA3D-203ENST00000463315 GAGE5Q13069 117 aa9.37□□□□□ -0.91
SEMA3D-203ENST00000463315 GAGE13Q4V321 117 aa9.37□□□□□ -0.91
SEMA3D-203ENST00000463315 C6orf223Q8N319 242 aa9.37□□□□□ -0.91
SEMA3D-203ENST00000463315 GTSF1Q8WW33 167 aa9.37□□□□□ -0.91
SEMA3D-203ENST00000463315 IFITM2Q01629 132 aa9.36□□□□□ -0.91
SEMA3D-203ENST00000463315 DPH3P1Q9H4G8 78 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms