RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 M0R378 163 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 HCRTO43612 131 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 YPEL1O60688 119 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 TCL1BO95988 128 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 MPC1LP0DKB6 136 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 INSL3P51460 131 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 KRTAP12-4P60329 112 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 UBE2BP63146 152 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 SEC11AP67812 179 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 HIST1H1AQ02539 215 aaPredicted RBP1.79□□□□□ -2.12
USH2A-203ENST00000463147 CDK5R1Q15078 307 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 FKBP1CQ5VVH2 108 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 C3orf56Q8N813 242 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 OR4D11Q8NGI4 311 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 ZNF563Q8TA94 476 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 PLEKHB2Q96CS7 222 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 BORCS8Q96FH0 119 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 YPEL2Q96QA6 119 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 PMCHL2Q9BQD1 86 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 ST20Q9HBF5 79 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 MANBALQ9NQG1 85 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 CMC2Q9NRP2 79 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 ERG28Q9UKR5 140 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 BOKQ9UMX3 212 aaPredicted RBP1.79□□□□□ -2.12
USH2A-203ENST00000463147 KCPQ6ZWJ8 1503 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 COL4A5P29400 1685 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 NRXN2Q9P2S2 1712 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 LOC285556D6RIA3 1793 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 COL14A1Q05707 1796 aaKnown RBP1.79□□□□□ -2.12
USH2A-203ENST00000463147 TSC2P49815 1807 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 ANKRD36A6QL64 1941 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 ALPK3Q96L96 1907 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 ROBO1Q9Y6N7 1651 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 TMEM212A6NML5 194 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 H3BRM9 83 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 M0R2Z0 102 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 CCL22O00626 93 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 DEGS1O15121 323 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 ZNF737O75373 536 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 BCL2P10415 239 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 FABP2P12104 132 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 FKBP2P26885 142 aaKnown RBP1.78□□□□□ -2.12
USH2A-203ENST00000463147 FXYD6P3P58550 94 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 PLCXD2Q0VAA5 305 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 Q0VG73 95 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 BVES-AS1Q5T3Y7 98 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 CYP2G1PQ6ZSU1 146 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 C10orf126Q8N4M7 172 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 ZNF714Q96N38 554 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 GPX7Q96SL4 187 aaPredicted RBP1.78□□□□□ -2.12
USH2A-203ENST00000463147 SMIM7Q9BQ49 75 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 FAM103A1Q9BTL3 118 aaKnown RBP1.78□□□□□ -2.12
USH2A-203ENST00000463147 NPVFQ9HCQ7 196 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 GNG13Q9P2W3 67 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 LAMTOR3Q9UHA4 124 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 NAT8BQ9UHF3 227 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 LHFPL6Q9Y693 200 aa1.78□□□□□ -2.12
USH2A-203ENST00000463147 MYO18AQ92614 2054 aaKnown RBP1.78□□□□□ -2.13
USH2A-203ENST00000463147 EML6Q6ZMW3 1958 aa1.78□□□□□ -2.13
USH2A-203ENST00000463147 TRPM7Q96QT4 1865 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 COL11A1P12107 1806 aaPredicted RBP1.77□□□□□ -2.13
USH2A-203ENST00000463147 NUP98P52948 1817 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 SSC5DA1L4H1 1573 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 TRGV10A0A0A0MS01 117 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 TRAV3A0A0B4J244 114 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 TRAV1-1A0A0B4J248 108 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 C7orf71A4D174 169 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 TMEM189A5PLL7 270 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 CPSF4LA6NMK7 179 aaKnown RBP1.77□□□□□ -2.13
USH2A-203ENST00000463147 CEBPZOSA8MTT3 80 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 C19orf84I3L1E1 186 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 PIN1P1O15428 100 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 NDUFB3O43676 98 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 GYPAP02724 150 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 DBIP07108 87 aaKnown RBP1.77□□□□□ -2.13
USH2A-203ENST00000463147 GPX1P07203 203 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 SPINK8P0C7L1 97 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 ZNF93P35789 620 aaPredicted RBP1.77□□□□□ -2.13
USH2A-203ENST00000463147 RTL8BQ17RB0 113 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 SOSTDC1Q6X4U4 206 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 FOXI2Q6ZQN5 318 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 Q6ZRN7 208 aaPredicted RBP1.77□□□□□ -2.13
USH2A-203ENST00000463147 TTC9CQ8N5M4 171 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 TEX29Q8N6K0 151 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 MORN4Q8NDC4 146 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 OR10AG1Q8NH19 301 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 VSTM2AQ8TAG5 236 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 PP6455Q8WZ26 134 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 CARD19Q96LW7 228 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 PRADC1Q9BSG0 188 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 RTL8AQ9BWD3 113 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 NPCDR1Q9BY65 106 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 MRPL32Q9BYC8 188 aaKnown RBP1.77□□□□□ -2.13
USH2A-203ENST00000463147 TMEM126AQ9H061 195 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 SPANXCQ9NY87 97 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 EPDR1Q9UM22 224 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 MED31Q9Y3C7 131 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 SPCS1Q9Y6A9 102 aa1.77□□□□□ -2.13
USH2A-203ENST00000463147 CHD3Q12873 2000 aaKnown RBP1.77□□□□□ -2.13
USH2A-203ENST00000463147 SIP14410 1827 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms