RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 LRCOL1A6NCL2 159 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 BCL2L11O43521 198 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 PFDN1O60925 122 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 IGHV3-30P01768 117 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 IGHV3-33P01772 117 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 CXCL1P09341 107 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 LINC00694P0DN24 101 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 IGHV3-30-3P0DP02 117 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 IGHV3-30-5P0DP03 117 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 GCSHP23434 173 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 LAGE3Q14657 143 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 TMUB2Q71RG4 321 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 BAGE2Q86Y30 109 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 ZFP82Q8N141 532 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 C14orf178Q8N769 122 aaPredicted RBP4.88□□□□□ -1.63
PTPRF-210ENST00000463041 NTN5Q8WTR8 489 aaPredicted RBP4.88□□□□□ -1.63
PTPRF-210ENST00000463041 MLST8Q9BVC4 326 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 FAT1Q14517 4588 aa4.88□□□□□ -1.63
PTPRF-210ENST00000463041 TMSB15BA0A087X1C1 80 aa4.87□□□□□ -1.63
PTPRF-210ENST00000463041 TRBV10-1A0A0K0K1A3 114 aa4.87□□□□□ -1.63
PTPRF-210ENST00000463041 FUSP35637 526 aaKnown RBP eCLIP4.87□□□□□ -1.63
PTPRF-210ENST00000463041 RAB5CP51148 216 aa4.87□□□□□ -1.63
PTPRF-210ENST00000463041 XGP55808 180 aa4.87□□□□□ -1.63
PTPRF-210ENST00000463041 TOR2AQ5JU69 321 aa4.87□□□□□ -1.63
PTPRF-210ENST00000463041 EIF5AL1Q6IS14 154 aaKnown RBP4.87□□□□□ -1.63
PTPRF-210ENST00000463041 Q9HAA7 133 aa4.87□□□□□ -1.63
PTPRF-210ENST00000463041 Q9UF83 564 aa4.87□□□□□ -1.63
PTPRF-210ENST00000463041 TRBV7-3A0A075B6L6 115 aa4.86□□□□□ -1.63
PTPRF-210ENST00000463041 A0A087WWL8 130 aa4.86□□□□□ -1.63
PTPRF-210ENST00000463041 TRAV1-1A0A0B4J248 108 aa4.86□□□□□ -1.63
PTPRF-210ENST00000463041 A0A1B0GV50 99 aa4.86□□□□□ -1.63
PTPRF-210ENST00000463041 SCO2A0A1W2PP80 73 aa4.86□□□□□ -1.63
PTPRF-210ENST00000463041 EPM2AB3EWF7 344 aa4.86□□□□□ -1.63
PTPRF-210ENST00000463041 TEX46H3BTG2 121 aa4.86□□□□□ -1.63
PTPRF-210ENST00000463041 M0R381 172 aa4.86□□□□□ -1.63
PTPRF-210ENST00000463041 KRTAP10-1P60331 282 aa4.86□□□□□ -1.63
PTPRF-210ENST00000463041 RAB4BP61018 213 aa4.86□□□□□ -1.63
PTPRF-210ENST00000463041 RPL36AP83881 106 aaKnown RBP4.86□□□□□ -1.63
PTPRF-210ENST00000463041 FAM74A4Q5TZK3 123 aa4.86□□□□□ -1.63
PTPRF-210ENST00000463041 RPL36ALQ969Q0 106 aaKnown RBP4.86□□□□□ -1.63
PTPRF-210ENST00000463041 SSBP4Q9BWG4 385 aaPredicted RBP4.86□□□□□ -1.63
PTPRF-210ENST00000463041 MANBALQ9NQG1 85 aa4.86□□□□□ -1.63
PTPRF-210ENST00000463041 COX11Q9Y6N1 276 aa4.86□□□□□ -1.63
PTPRF-210ENST00000463041 IGLV5-52A0A0A0MRZ9 124 aa4.85□□□□□ -1.63
PTPRF-210ENST00000463041 SNAI2O43623 268 aa4.85□□□□□ -1.63
PTPRF-210ENST00000463041 OR5AL1P0C617 328 aa4.85□□□□□ -1.63
PTPRF-210ENST00000463041 CCL20P78556 96 aa4.85□□□□□ -1.63
PTPRF-210ENST00000463041 ELOBQ15370 118 aa4.85□□□□□ -1.63
PTPRF-210ENST00000463041 DAZ4Q86SG3 579 aaKnown RBP4.85□□□□□ -1.63
PTPRF-210ENST00000463041 NIT1Q86X76 327 aa4.85□□□□□ -1.63
PTPRF-210ENST00000463041 Q8N814 137 aa4.85□□□□□ -1.63
PTPRF-210ENST00000463041 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.85□□□□□ -1.63
PTPRF-210ENST00000463041 OR10G8Q8NGN5 311 aa4.85□□□□□ -1.63
PTPRF-210ENST00000463041 RMI2Q96E14 147 aa4.85□□□□□ -1.63
PTPRF-210ENST00000463041 CHCHD7Q9BUK0 85 aa4.85□□□□□ -1.63
PTPRF-210ENST00000463041 DAZ3Q9NR90 486 aaKnown RBP4.85□□□□□ -1.63
PTPRF-210ENST00000463041 URGCP-MRPS24S4R325 110 aa4.85□□□□□ -1.63
PTPRF-210ENST00000463041 A0A087WX48 190 aa4.84□□□□□ -1.63
PTPRF-210ENST00000463041 C1QBP02746 253 aa4.84□□□□□ -1.63
PTPRF-210ENST00000463041 RPL35P42766 123 aaKnown RBP4.84□□□□□ -1.63
PTPRF-210ENST00000463041 SULT1A2P50226 295 aa4.84□□□□□ -1.63
PTPRF-210ENST00000463041 UBE2D3P61077 147 aa4.84□□□□□ -1.63
PTPRF-210ENST00000463041 UBE2D2P62837 147 aa4.84□□□□□ -1.63
PTPRF-210ENST00000463041 RPL19P84098 196 aaKnown RBP4.84□□□□□ -1.63
PTPRF-210ENST00000463041 SPANXN1Q5VSR9 72 aa4.84□□□□□ -1.63
PTPRF-210ENST00000463041 PRR27Q6MZM9 219 aa4.84□□□□□ -1.63
PTPRF-210ENST00000463041 KCNIP4Q6PIL6 250 aa4.84□□□□□ -1.63
PTPRF-210ENST00000463041 FRZBQ92765 325 aa4.84□□□□□ -1.63
PTPRF-210ENST00000463041 C11orf52Q96A22 123 aa4.84□□□□□ -1.63
PTPRF-210ENST00000463041 DAZAP1Q96EP5 407 aaKnown RBP4.84□□□□□ -1.63
PTPRF-210ENST00000463041 TMEM70Q9BUB7 260 aa4.84□□□□□ -1.63
PTPRF-210ENST00000463041 GNG13Q9P2W3 67 aa4.84□□□□□ -1.63
PTPRF-210ENST00000463041 SRRM2Q9UQ35 2752 aaKnown RBP4.84□□□□□ -1.63
PTPRF-210ENST00000463041 PDE6DO43924 150 aa4.83□□□□□ -1.64
PTPRF-210ENST00000463041 SMIM17P0DL12 118 aa4.83□□□□□ -1.64
PTPRF-210ENST00000463041 RPS20P60866 119 aaKnown RBP4.83□□□□□ -1.64
PTPRF-210ENST00000463041 Q0VG73 95 aa4.83□□□□□ -1.64
PTPRF-210ENST00000463041 TMEM97Q5BJF2 176 aa4.83□□□□□ -1.64
PTPRF-210ENST00000463041 SLC51BQ86UW2 128 aa4.83□□□□□ -1.64
PTPRF-210ENST00000463041 TCTE3Q8IZS6 198 aa4.83□□□□□ -1.64
PTPRF-210ENST00000463041 Q8N3U1 123 aa4.83□□□□□ -1.64
PTPRF-210ENST00000463041 Q8N976 141 aa4.83□□□□□ -1.64
PTPRF-210ENST00000463041 OR10AG1Q8NH19 301 aa4.83□□□□□ -1.64
PTPRF-210ENST00000463041 SMIM12Q96EX1 92 aa4.83□□□□□ -1.64
PTPRF-210ENST00000463041 KLK12Q9UKR0 248 aa4.83□□□□□ -1.64
PTPRF-210ENST00000463041 TRBV6-8A0A0A6YYG3 113 aa4.82□□□□□ -1.64
PTPRF-210ENST00000463041 XKRY2A2RUG3 117 aa4.82□□□□□ -1.64
PTPRF-210ENST00000463041 TMEM262E9PQX1 116 aa4.82□□□□□ -1.64
PTPRF-210ENST00000463041 F2Z2F3 143 aa4.82□□□□□ -1.64
PTPRF-210ENST00000463041 F5H697 171 aa4.82□□□□□ -1.64
PTPRF-210ENST00000463041 FAM229AH3BQW9 127 aa4.82□□□□□ -1.64
PTPRF-210ENST00000463041 IFNA1P01562 189 aa4.82□□□□□ -1.64
PTPRF-210ENST00000463041 TAGLN2P37802 199 aaKnown RBP4.82□□□□□ -1.64
PTPRF-210ENST00000463041 PKIAP61925 76 aa4.82□□□□□ -1.64
PTPRF-210ENST00000463041 ZNF56Q15929 161 aa4.82□□□□□ -1.64
PTPRF-210ENST00000463041 NEXN-AS1Q8NBZ9 246 aa4.82□□□□□ -1.64
PTPRF-210ENST00000463041 BIN3Q9NQY0 253 aa4.82□□□□□ -1.64
PTPRF-210ENST00000463041 KIF25-AS1Q9Y6Z4 181 aa4.82□□□□□ -1.64
PTPRF-210ENST00000463041 IGKV2D-24A0A075B6R9 120 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 MUC21A0A0G2JKD1 596 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms