RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 CENPVL3A0A0U1RRI6 287 aa9.39□□□□□ -0.91
HDAC4-208ENST00000463007 ORMDL2Q53FV1 153 aa9.39□□□□□ -0.91
HDAC4-208ENST00000463007 PKD1L2Q7Z442 2459 aa9.39□□□□□ -0.91
HDAC4-208ENST00000463007 TRAV12-3A0A0B4J271 114 aa9.38□□□□□ -0.91
HDAC4-208ENST00000463007 TSPAN13O95857 204 aa9.38□□□□□ -0.91
HDAC4-208ENST00000463007 PF4V1P10720 104 aa9.38□□□□□ -0.91
HDAC4-208ENST00000463007 SMCPP49901 116 aaPredicted RBP9.38□□□□□ -0.91
HDAC4-208ENST00000463007 FOXI1Q12951 378 aa9.38□□□□□ -0.91
HDAC4-208ENST00000463007 NEXN-AS1Q8NBZ9 246 aa9.38□□□□□ -0.91
HDAC4-208ENST00000463007 PIFOQ8TCI5 191 aa9.38□□□□□ -0.91
HDAC4-208ENST00000463007 DLX4Q92988 240 aaPredicted RBP9.38□□□□□ -0.91
HDAC4-208ENST00000463007 DPH3P1Q9H4G8 78 aa9.38□□□□□ -0.91
HDAC4-208ENST00000463007 TRAV12-2A0A075B6T6 113 aa9.38□□□□□ -0.91
HDAC4-208ENST00000463007 NPFFO15130 113 aa9.38□□□□□ -0.91
HDAC4-208ENST00000463007 CRIP2P52943 208 aaPredicted RBP9.38□□□□□ -0.91
HDAC4-208ENST00000463007 NPC2P61916 151 aa9.38□□□□□ -0.91
HDAC4-208ENST00000463007 Q1RN00 199 aa9.38□□□□□ -0.91
HDAC4-208ENST00000463007 C5orf56Q8N8D9 126 aa9.38□□□□□ -0.91
HDAC4-208ENST00000463007 ZFYVE26Q68DK2 2539 aa9.38□□□□□ -0.91
HDAC4-208ENST00000463007 CD7P09564 240 aa9.37□□□□□ -0.91
HDAC4-208ENST00000463007 GEMIN7Q9H840 131 aaKnown RBP9.37□□□□□ -0.91
HDAC4-208ENST00000463007 PRO0461Q9UI25 63 aa9.37□□□□□ -0.91
HDAC4-208ENST00000463007 PRRC2AP48634 2157 aaKnown RBP9.37□□□□□ -0.91
HDAC4-208ENST00000463007 FHL3Q13643 280 aa9.37□□□□□ -0.91
HDAC4-208ENST00000463007 TOMM6Q96B49 74 aa9.37□□□□□ -0.91
HDAC4-208ENST00000463007 IGHV3-73A0A0B4J1V6 119 aa9.36□□□□□ -0.91
HDAC4-208ENST00000463007 TRAV2A0A0B4J234 112 aa9.36□□□□□ -0.91
HDAC4-208ENST00000463007 RNASE13Q5GAN3 156 aaKnown RBP9.36□□□□□ -0.91
HDAC4-208ENST00000463007 TRAV21A0A0B4J279 112 aa9.36□□□□□ -0.91
HDAC4-208ENST00000463007 TCL1BO95988 128 aa9.36□□□□□ -0.91
HDAC4-208ENST00000463007 TRPT1Q86TN4 253 aaKnown RBP9.36□□□□□ -0.91
HDAC4-208ENST00000463007 ZFAND2AQ8N6M9 145 aa9.36□□□□□ -0.91
HDAC4-208ENST00000463007 TSPEAR-AS2P59090 65 aa9.36□□□□□ -0.91
HDAC4-208ENST00000463007 C9orf47Q6ZRZ4 202 aa9.36□□□□□ -0.91
HDAC4-208ENST00000463007 PIEZO1Q92508 2521 aa9.35□□□□□ -0.91
HDAC4-208ENST00000463007 TRAV41A0A0B4J266 112 aa9.35□□□□□ -0.91
HDAC4-208ENST00000463007 XGP55808 180 aa9.35□□□□□ -0.91
HDAC4-208ENST00000463007 MRAP2Q96G30 205 aa9.35□□□□□ -0.91
HDAC4-208ENST00000463007 RBAKDNA6NC62 111 aa9.35□□□□□ -0.91
HDAC4-208ENST00000463007 PRSS2P07478 247 aa9.35□□□□□ -0.91
HDAC4-208ENST00000463007 ZNF56Q15929 161 aa9.35□□□□□ -0.91
HDAC4-208ENST00000463007 TAL2Q16559 108 aa9.35□□□□□ -0.91
HDAC4-208ENST00000463007 ZNF580Q9UK33 172 aa9.35□□□□□ -0.91
HDAC4-208ENST00000463007 ABCA12Q86UK0 2595 aa9.35□□□□□ -0.91
HDAC4-208ENST00000463007 C1QTNF4Q9BXJ3 329 aa9.34□□□□□ -0.91
HDAC4-208ENST00000463007 CCDC168Q8NDH2 2452 aa9.34□□□□□ -0.91
HDAC4-208ENST00000463007 FBN2P35556 2912 aa9.34□□□□□ -0.91
HDAC4-208ENST00000463007 LINC01546A6NGU7 62 aa9.34□□□□□ -0.91
HDAC4-208ENST00000463007 CFAP126Q5VTH2 177 aa9.34□□□□□ -0.91
HDAC4-208ENST00000463007 FAM159AQ6UWV7 190 aa9.34□□□□□ -0.91
HDAC4-208ENST00000463007 SPATA25Q9BR10 227 aa9.34□□□□□ -0.91
HDAC4-208ENST00000463007 U3KQE9 123 aa9.34□□□□□ -0.91
HDAC4-208ENST00000463007 IGSF10Q6WRI0 2623 aa9.34□□□□□ -0.91
HDAC4-208ENST00000463007 C9JAW5 83 aa9.34□□□□□ -0.91
HDAC4-208ENST00000463007 CRYGDP07320 174 aa9.34□□□□□ -0.91
HDAC4-208ENST00000463007 IGHV4-61A0A0C4DH41 118 aa9.33□□□□□ -0.92
HDAC4-208ENST00000463007 SDHAF1A6NFY7 115 aa9.33□□□□□ -0.92
HDAC4-208ENST00000463007 ZNF688P0C7X2 276 aa9.33□□□□□ -0.92
HDAC4-208ENST00000463007 RNASE3P12724 160 aaKnown RBP9.33□□□□□ -0.92
HDAC4-208ENST00000463007 GATA3P23771 443 aa9.33□□□□□ -0.92
HDAC4-208ENST00000463007 BLCAPP62952 87 aa9.33□□□□□ -0.92
HDAC4-208ENST00000463007 C10orf105Q8TEF2 133 aa9.33□□□□□ -0.92
HDAC4-208ENST00000463007 TSHBP01222 138 aa9.33□□□□□ -0.92
HDAC4-208ENST00000463007 SRSF2Q01130 221 aaKnown RBP9.33□□□□□ -0.92
HDAC4-208ENST00000463007 PSMG4Q5JS54 123 aa9.33□□□□□ -0.92
HDAC4-208ENST00000463007 GPHB5Q86YW7 130 aa9.33□□□□□ -0.92
HDAC4-208ENST00000463007 IGHV1-69DA0A0B4J2H0 117 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 IGHV1-69P01742 117 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 PRM2P04554 102 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 NDUFA11Q86Y39 141 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 RHPN1-AS1Q9BWJ2 59 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 CDIP1Q9H305 208 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 TRBV7-1A0A0A6YYK4 115 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 TRAV12-1A0A0B4J245 112 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 BRI3O95415 125 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 CFC1BP0CG36 223 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 CFC1P0CG37 223 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 LGALS3P17931 250 aaKnown RBP9.32□□□□□ -0.92
HDAC4-208ENST00000463007 HERVK_113P61574 105 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 DUX5Q96PT3 197 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 EPG5Q9HCE0 2579 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 A0A0J9YY99 117 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 SUMO4Q6EEV6 95 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 C9orf139Q6ZV77 190 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 ZNRF2Q8NHG8 242 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 CARD19Q96LW7 228 aa9.32□□□□□ -0.92
HDAC4-208ENST00000463007 NAV2Q8IVL1 2488 aa9.31□□□□□ -0.92
HDAC4-208ENST00000463007 ANKRD29Q8N6D5 301 aa9.31□□□□□ -0.92
HDAC4-208ENST00000463007 A4D1N5 150 aa9.31□□□□□ -0.92
HDAC4-208ENST00000463007 CEMP1Q6PRD7 247 aaPredicted RBP9.31□□□□□ -0.92
HDAC4-208ENST00000463007 SPXQ9BT56 116 aa9.31□□□□□ -0.92
HDAC4-208ENST00000463007 MDFICQ9P1T7 246 aa9.31□□□□□ -0.92
HDAC4-208ENST00000463007 SS18L2Q9UHA2 77 aa9.31□□□□□ -0.92
HDAC4-208ENST00000463007 MOB4Q9Y3A3 225 aa9.31□□□□□ -0.92
HDAC4-208ENST00000463007 A8MWV9 139 aa9.3□□□□□ -0.92
HDAC4-208ENST00000463007 Q6ZUT4 128 aa9.3□□□□□ -0.92
HDAC4-208ENST00000463007 NF1P21359 2839 aa9.3□□□□□ -0.92
HDAC4-208ENST00000463007 IGLV4-69A0A075B6H9 119 aa9.3□□□□□ -0.92
HDAC4-208ENST00000463007 RNF223E7ERA6 249 aa9.3□□□□□ -0.92
HDAC4-208ENST00000463007 PMVKQ15126 192 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms