RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 OR2T35Q8NGX2 323 aa4.81□□□□□ -1.64
SMC3-202ENST00000462899 BCL7BQ9BQE9 202 aa4.81□□□□□ -1.64
SMC3-202ENST00000462899 OTORQ9NRC9 128 aa4.81□□□□□ -1.64
SMC3-202ENST00000462899 PRR34Q9NV39 138 aa4.81□□□□□ -1.64
SMC3-202ENST00000462899 MUC17Q685J3 4493 aa4.81□□□□□ -1.64
SMC3-202ENST00000462899 GAGE12HA6NDE8 117 aa4.8□□□□□ -1.64
SMC3-202ENST00000462899 NAP1L6A6NFF2 107 aa4.8□□□□□ -1.64
SMC3-202ENST00000462899 UBE2D3P61077 147 aa4.8□□□□□ -1.64
SMC3-202ENST00000462899 UBE2D2P62837 147 aa4.8□□□□□ -1.64
SMC3-202ENST00000462899 SRSF9Q13242 221 aaKnown RBP eCLIP4.8□□□□□ -1.64
SMC3-202ENST00000462899 MIAQ16674 131 aa4.8□□□□□ -1.64
SMC3-202ENST00000462899 STX12Q86Y82 276 aa4.8□□□□□ -1.64
SMC3-202ENST00000462899 THAP6Q8TBB0 222 aa4.8□□□□□ -1.64
SMC3-202ENST00000462899 IGKV3D-20A0A0C4DH25 116 aa4.79□□□□□ -1.64
SMC3-202ENST00000462899 PGPA6NDG6 321 aa4.79□□□□□ -1.64
SMC3-202ENST00000462899 TAAR5O14804 337 aa4.79□□□□□ -1.64
SMC3-202ENST00000462899 CRPP02741 224 aa4.79□□□□□ -1.64
SMC3-202ENST00000462899 TMBIM6P55061 237 aa4.79□□□□□ -1.64
SMC3-202ENST00000462899 GNG5P63218 68 aa4.79□□□□□ -1.64
SMC3-202ENST00000462899 RAB32Q13637 225 aa4.79□□□□□ -1.64
SMC3-202ENST00000462899 SPINK6Q6UWN8 80 aa4.79□□□□□ -1.64
SMC3-202ENST00000462899 C15orf54Q8N8G6 183 aa4.79□□□□□ -1.64
SMC3-202ENST00000462899 OR10G8Q8NGN5 311 aa4.79□□□□□ -1.64
SMC3-202ENST00000462899 HYLS1Q96M11 299 aa4.79□□□□□ -1.64
SMC3-202ENST00000462899 WDR61Q9GZS3 305 aaKnown RBP4.79□□□□□ -1.64
SMC3-202ENST00000462899 DPH3P1Q9H4G8 78 aa4.79□□□□□ -1.64
SMC3-202ENST00000462899 IGHV3-64A0A075B6Q5 118 aa4.78□□□□□ -1.64
SMC3-202ENST00000462899 TRBV6-8A0A0A6YYG3 113 aa4.78□□□□□ -1.64
SMC3-202ENST00000462899 TRBV10-1A0A0K0K1A3 114 aa4.78□□□□□ -1.64
SMC3-202ENST00000462899 H3BMQ9 156 aa4.78□□□□□ -1.64
SMC3-202ENST00000462899 RHODO00212 210 aa4.78□□□□□ -1.64
SMC3-202ENST00000462899 GCGP01275 180 aa4.78□□□□□ -1.64
SMC3-202ENST00000462899 MALP21145 153 aa4.78□□□□□ -1.64
SMC3-202ENST00000462899 KHDC3LQ587J8 217 aa4.78□□□□□ -1.64
SMC3-202ENST00000462899 OR5C1Q8NGR4 320 aa4.78□□□□□ -1.64
SMC3-202ENST00000462899 OR2G3Q8NGZ4 309 aa4.78□□□□□ -1.64
SMC3-202ENST00000462899 C7orf33Q8WU49 177 aa4.78□□□□□ -1.64
SMC3-202ENST00000462899 SGK494Q96LW2 274 aa4.78□□□□□ -1.64
SMC3-202ENST00000462899 SDHCQ99643 169 aaPredicted RBP4.78□□□□□ -1.64
SMC3-202ENST00000462899 KCNIP2Q9NS61 270 aa4.78□□□□□ -1.64
SMC3-202ENST00000462899 IL36BQ9NZH7 164 aa4.78□□□□□ -1.64
SMC3-202ENST00000462899 OR5AC2Q9NZP5 309 aa4.78□□□□□ -1.64
SMC3-202ENST00000462899 TRBV7-3A0A075B6L6 115 aa4.77□□□□□ -1.65
SMC3-202ENST00000462899 MUC21A0A0G2JKD1 596 aa4.77□□□□□ -1.65
SMC3-202ENST00000462899 EIF3GO75821 320 aaKnown RBP eCLIP4.77□□□□□ -1.65
SMC3-202ENST00000462899 ANGP03950 147 aaKnown RBP4.77□□□□□ -1.65
SMC3-202ENST00000462899 PVALBP20472 110 aaPredicted RBP4.77□□□□□ -1.65
SMC3-202ENST00000462899 LGALSLQ3ZCW2 172 aaPredicted RBP4.77□□□□□ -1.65
SMC3-202ENST00000462899 DNLZQ5SXM8 178 aa4.77□□□□□ -1.65
SMC3-202ENST00000462899 REG3GQ6UW15 175 aa4.77□□□□□ -1.65
SMC3-202ENST00000462899 CMTM2Q8TAZ6 248 aa4.77□□□□□ -1.65
SMC3-202ENST00000462899 MRPS26Q9BYN8 205 aaKnown RBP4.77□□□□□ -1.65
SMC3-202ENST00000462899 NMES1Q9C002 83 aa4.77□□□□□ -1.65
SMC3-202ENST00000462899 MBD2Q9UBB5 411 aa4.77□□□□□ -1.65
SMC3-202ENST00000462899 SERTM2A0A1B0GWG4 89 aa4.76□□□□□ -1.65
SMC3-202ENST00000462899 FAM25EA8MYX2 175 aa4.76□□□□□ -1.65
SMC3-202ENST00000462899 TCRAP04437 139 aa4.76□□□□□ -1.65
SMC3-202ENST00000462899 S100A10P60903 97 aa4.76□□□□□ -1.65
SMC3-202ENST00000462899 FAM74A1Q5RGS3 127 aa4.76□□□□□ -1.65
SMC3-202ENST00000462899 KCNIP4Q6PIL6 250 aa4.76□□□□□ -1.65
SMC3-202ENST00000462899 NTM-AS1Q6ZSK4 140 aa4.76□□□□□ -1.65
SMC3-202ENST00000462899 SFRP2Q96HF1 295 aa4.76□□□□□ -1.65
SMC3-202ENST00000462899 PSG8Q9UQ74 426 aa4.76□□□□□ -1.65
SMC3-202ENST00000462899 hDV102S1A0JD36 115 aa4.75□□□□□ -1.65
SMC3-202ENST00000462899 H3BVH4 76 aa4.75□□□□□ -1.65
SMC3-202ENST00000462899 TCRBP04435 133 aa4.75□□□□□ -1.65
SMC3-202ENST00000462899 TAS2R45P59539 299 aa4.75□□□□□ -1.65
SMC3-202ENST00000462899 RPL36AP83881 106 aaKnown RBP4.75□□□□□ -1.65
SMC3-202ENST00000462899 SMUG1Q53HV7 270 aa4.75□□□□□ -1.65
SMC3-202ENST00000462899 PRR27Q6MZM9 219 aa4.75□□□□□ -1.65
SMC3-202ENST00000462899 CLPSL2Q6UWE3 100 aa4.75□□□□□ -1.65
SMC3-202ENST00000462899 PQLC2Q6ZP29 291 aa4.75□□□□□ -1.65
SMC3-202ENST00000462899 NEXN-AS1Q8NBZ9 246 aa4.75□□□□□ -1.65
SMC3-202ENST00000462899 SUN5Q8TC36 379 aa4.75□□□□□ -1.65
SMC3-202ENST00000462899 RPL36ALQ969Q0 106 aaKnown RBP4.75□□□□□ -1.65
SMC3-202ENST00000462899 SEC22CQ9BRL7 303 aa4.75□□□□□ -1.65
SMC3-202ENST00000462899 NDFIP1Q9BT67 221 aa4.75□□□□□ -1.65
SMC3-202ENST00000462899 A0A087WWL8 130 aa4.74□□□□□ -1.65
SMC3-202ENST00000462899 A0A0U1RQV1 116 aa4.74□□□□□ -1.65
SMC3-202ENST00000462899 TMEM262E9PQX1 116 aa4.74□□□□□ -1.65
SMC3-202ENST00000462899 C17orf112F2Z3M2 114 aa4.74□□□□□ -1.65
SMC3-202ENST00000462899 H0YIZ8 118 aa4.74□□□□□ -1.65
SMC3-202ENST00000462899 PTTG1O95997 202 aa4.74□□□□□ -1.65
SMC3-202ENST00000462899 PKIAP61925 76 aa4.74□□□□□ -1.65
SMC3-202ENST00000462899 RBX1P62877 108 aa4.74□□□□□ -1.65
SMC3-202ENST00000462899 FLI1Q01543 452 aaPredicted RBP4.74□□□□□ -1.65
SMC3-202ENST00000462899 FOXI1Q12951 378 aa4.74□□□□□ -1.65
SMC3-202ENST00000462899 CNPY1Q3B7I2 92 aa4.74□□□□□ -1.65
SMC3-202ENST00000462899 FAM74A4Q5TZK3 123 aa4.74□□□□□ -1.65
SMC3-202ENST00000462899 LINC00269Q8N2A0 174 aa4.74□□□□□ -1.65
SMC3-202ENST00000462899 C15orf56Q8N910 161 aa4.74□□□□□ -1.65
SMC3-202ENST00000462899 C5orf17Q8NAS9 161 aa4.74□□□□□ -1.65
SMC3-202ENST00000462899 RBM38Q9H0Z9 239 aaKnown RBP4.74□□□□□ -1.65
SMC3-202ENST00000462899 VAX2Q9UIW0 290 aa4.74□□□□□ -1.65
SMC3-202ENST00000462899 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.73□□□□□ -1.65
SMC3-202ENST00000462899 PLA2G10O15496 165 aa4.73□□□□□ -1.65
SMC3-202ENST00000462899 S100A4P26447 101 aaKnown RBP4.73□□□□□ -1.65
SMC3-202ENST00000462899 COX6A2Q02221 97 aa4.73□□□□□ -1.65
SMC3-202ENST00000462899 ZFP69Q49AA0 526 aa4.73□□□□□ -1.65
SMC3-202ENST00000462899 C20orf203Q8NBC4 194 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms