RNA–Protein interactions for RNA: ENST00000462777.1

HLA-F-222, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 779 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-222ENST00000462777 Q6ZQT7 251 aa13.53□□□□□ -0.24
HLA-F-222ENST00000462777 SPXQ9BT56 116 aa13.53□□□□□ -0.24
HLA-F-222ENST00000462777 GCGP01275 180 aa13.52□□□□□ -0.25
HLA-F-222ENST00000462777 GYPEP15421 78 aa13.52□□□□□ -0.25
HLA-F-222ENST00000462777 FAM159AQ6UWV7 190 aa13.52□□□□□ -0.25
HLA-F-222ENST00000462777 C10orf126Q8N4M7 172 aa13.52□□□□□ -0.25
HLA-F-222ENST00000462777 Q8TAT8 98 aa13.52□□□□□ -0.25
HLA-F-222ENST00000462777 SFRP2Q96HF1 295 aa13.52□□□□□ -0.25
HLA-F-222ENST00000462777 TRGV11A0A075B6L2 103 aa13.51□□□□□ -0.25
HLA-F-222ENST00000462777 IGLV2-11P01706 119 aa13.51□□□□□ -0.25
HLA-F-222ENST00000462777 IGLV2-8P01709 118 aa13.51□□□□□ -0.25
HLA-F-222ENST00000462777 GCSHP23434 173 aa13.51□□□□□ -0.25
HLA-F-222ENST00000462777 KRTAP10-1P60331 282 aa13.51□□□□□ -0.25
HLA-F-222ENST00000462777 SAPCD1Q5SSQ6 148 aa13.51□□□□□ -0.25
HLA-F-222ENST00000462777 FAM231DQ6ZW35 169 aa13.51□□□□□ -0.25
HLA-F-222ENST00000462777 TMEM183AQ8IXX5 376 aa13.51□□□□□ -0.25
HLA-F-222ENST00000462777 C15orf54Q8N8G6 183 aa13.51□□□□□ -0.25
HLA-F-222ENST00000462777 RASL10AQ92737 203 aa13.51□□□□□ -0.25
HLA-F-222ENST00000462777 ZNF479Q96JC4 524 aa13.51□□□□□ -0.25
HLA-F-222ENST00000462777 MLST8Q9BVC4 326 aa13.51□□□□□ -0.25
HLA-F-222ENST00000462777 OSTCQ9NRP0 149 aa13.51□□□□□ -0.25
HLA-F-222ENST00000462777 COX8CQ7Z4L0 72 aa13.5□□□□□ -0.25
HLA-F-222ENST00000462777 WFDC10BQ8IUB3 73 aa13.5□□□□□ -0.25
HLA-F-222ENST00000462777 LINC00479Q96M42 142 aa13.5□□□□□ -0.25
HLA-F-222ENST00000462777 IMMP2LQ96T52 175 aa13.5□□□□□ -0.25
HLA-F-222ENST00000462777 MDFICQ9P1T7 246 aa13.5□□□□□ -0.25
HLA-F-222ENST00000462777 PSG8Q9UQ74 426 aa13.5□□□□□ -0.25
HLA-F-222ENST00000462777 TRAV34A0A0B4J273 112 aa13.49□□□□□ -0.25
HLA-F-222ENST00000462777 K7EN84 100 aa13.49□□□□□ -0.25
HLA-F-222ENST00000462777 CRYGDP07320 174 aa13.49□□□□□ -0.25
HLA-F-222ENST00000462777 SH2D6Q7Z4S9 175 aa13.49□□□□□ -0.25
HLA-F-222ENST00000462777 OR10G8Q8NGN5 311 aa13.49□□□□□ -0.25
HLA-F-222ENST00000462777 BTF3L4Q96K17 158 aa13.49□□□□□ -0.25
HLA-F-222ENST00000462777 NDFIP1Q9BT67 221 aa13.49□□□□□ -0.25
HLA-F-222ENST00000462777 LENEPQ9Y5L5 61 aa13.49□□□□□ -0.25
HLA-F-222ENST00000462777 PGPEP1LA6NFU8 196 aa13.48□□□□□ -0.25
HLA-F-222ENST00000462777 Q6AWC8 147 aa13.48□□□□□ -0.25
HLA-F-222ENST00000462777 CBLN2Q8IUK8 224 aa13.48□□□□□ -0.25
HLA-F-222ENST00000462777 HERC1Q15751 4861 aa13.47□□□□□ -0.25
HLA-F-222ENST00000462777 TRAV4A0A0B4J268 109 aa13.47□□□□□ -0.25
HLA-F-222ENST00000462777 FAM229AH3BQW9 127 aa13.47□□□□□ -0.25
HLA-F-222ENST00000462777 PSCAO43653 123 aa13.47□□□□□ -0.25
HLA-F-222ENST00000462777 MGST1P10620 155 aaKnown RBP13.47□□□□□ -0.25
HLA-F-222ENST00000462777 S100PP25815 95 aa13.47□□□□□ -0.25
HLA-F-222ENST00000462777 OR4C5Q8NGB2 326 aa13.47□□□□□ -0.25
HLA-F-222ENST00000462777 KCNIP4Q6PIL6 250 aa13.46□□□□□ -0.25
HLA-F-222ENST00000462777 PRNTQ86SH4 94 aa13.46□□□□□ -0.25
HLA-F-222ENST00000462777 NAGKQ9UJ70 344 aa13.46□□□□□ -0.25
HLA-F-222ENST00000462777 DMBT1Q9UGM3 2413 aaPredicted RBP13.46□□□□□ -0.25
HLA-F-222ENST00000462777 TRAV9-1A0A075B6T8 112 aa13.45□□□□□ -0.26
HLA-F-222ENST00000462777 TRAV8-1A0A0A6YYK1 113 aa13.45□□□□□ -0.26
HLA-F-222ENST00000462777 SMR3BP02814 79 aaPredicted RBP13.45□□□□□ -0.26
HLA-F-222ENST00000462777 CT83Q5H943 113 aa13.45□□□□□ -0.26
HLA-F-222ENST00000462777 FAT1Q14517 4588 aa13.45□□□□□ -0.26
HLA-F-222ENST00000462777 IGLV5-52A0A0A0MRZ9 124 aa13.44□□□□□ -0.26
HLA-F-222ENST00000462777 M0R2P5 195 aa13.44□□□□□ -0.26
HLA-F-222ENST00000462777 NHLRC2Q8NBF2 726 aa13.44□□□□□ -0.26
HLA-F-222ENST00000462777 IGHV3-38A0A0C4DH36 116 aa13.43□□□□□ -0.26
HLA-F-222ENST00000462777 TDRG1Q3Y452 100 aa13.43□□□□□ -0.26
HLA-F-222ENST00000462777 NTN5Q8WTR8 489 aaPredicted RBP13.43□□□□□ -0.26
HLA-F-222ENST00000462777 DAZAP1Q96EP5 407 aaKnown RBP13.43□□□□□ -0.26
HLA-F-222ENST00000462777 YPEL4Q96NS1 127 aa13.43□□□□□ -0.26
HLA-F-222ENST00000462777 TRBV24-1A0A075B6N3 115 aa13.42□□□□□ -0.26
HLA-F-222ENST00000462777 C19orf71A6NCJ1 209 aa13.42□□□□□ -0.26
HLA-F-222ENST00000462777 GATCO43716 136 aaKnown RBP13.42□□□□□ -0.26
HLA-F-222ENST00000462777 TIRAPP58753 221 aa13.42□□□□□ -0.26
HLA-F-222ENST00000462777 RPL19P84098 196 aaKnown RBP13.42□□□□□ -0.26
HLA-F-222ENST00000462777 SGK494Q96LW2 274 aa13.42□□□□□ -0.26
HLA-F-222ENST00000462777 IL36BQ9NZH7 164 aa13.42□□□□□ -0.26
HLA-F-222ENST00000462777 V9GYV3 84 aa13.42□□□□□ -0.26
HLA-F-222ENST00000462777 TRAV8-6A0A0B4J262 113 aa13.41□□□□□ -0.26
HLA-F-222ENST00000462777 TRAV21A0A0B4J279 112 aa13.41□□□□□ -0.26
HLA-F-222ENST00000462777 PFN1P07737 140 aaKnown RBP13.41□□□□□ -0.26
HLA-F-222ENST00000462777 ELOBQ15370 118 aa13.41□□□□□ -0.26
HLA-F-222ENST00000462777 SMUG1Q53HV7 270 aa13.41□□□□□ -0.26
HLA-F-222ENST00000462777 TMEM70Q9BUB7 260 aa13.41□□□□□ -0.26
HLA-F-222ENST00000462777 COLCA2A8K830 154 aa13.4□□□□□ -0.26
HLA-F-222ENST00000462777 GNRH2O43555 120 aa13.4□□□□□ -0.26
HLA-F-222ENST00000462777 P01737 135 aa13.4□□□□□ -0.26
HLA-F-222ENST00000462777 PRR27Q6MZM9 219 aa13.4□□□□□ -0.26
HLA-F-222ENST00000462777 NUDT10Q8NFP7 164 aa13.4□□□□□ -0.26
HLA-F-222ENST00000462777 NUDT11Q96G61 164 aa13.4□□□□□ -0.26
HLA-F-222ENST00000462777 ZC2HC1AQ96GY0 325 aa13.4□□□□□ -0.26
HLA-F-222ENST00000462777 KCNS1Q96KK3 526 aa13.4□□□□□ -0.26
HLA-F-222ENST00000462777 IGHV3-16A0A0C4DH30 117 aa13.39□□□□□ -0.27
HLA-F-222ENST00000462777 FAM231BA6NCW3 169 aa13.39□□□□□ -0.27
HLA-F-222ENST00000462777 LINC01556Q5JQF7 62 aa13.39□□□□□ -0.27
HLA-F-222ENST00000462777 FAM162BQ5T6X4 162 aa13.39□□□□□ -0.27
HLA-F-222ENST00000462777 Q6ZSN1 163 aa13.39□□□□□ -0.27
HLA-F-222ENST00000462777 RNASE7Q9H1E1 156 aaKnown RBP13.39□□□□□ -0.27
HLA-F-222ENST00000462777 RPP21Q9H633 154 aaKnown RBP13.39□□□□□ -0.27
HLA-F-222ENST00000462777 LOC100131303A0A0U1RQF7 123 aa13.38□□□□□ -0.27
HLA-F-222ENST00000462777 A8MWL6 223 aa13.38□□□□□ -0.27
HLA-F-222ENST00000462777 IBA57-AS1B1ANH7 110 aa13.38□□□□□ -0.27
HLA-F-222ENST00000462777 GATA1P15976 413 aaPredicted RBP13.38□□□□□ -0.27
HLA-F-222ENST00000462777 OR10J3Q5JRS4 329 aa13.38□□□□□ -0.27
HLA-F-222ENST00000462777 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.38□□□□□ -0.27
HLA-F-222ENST00000462777 PRADC1Q9BSG0 188 aa13.38□□□□□ -0.27
HLA-F-222ENST00000462777 GFRA4Q9GZZ7 299 aa13.38□□□□□ -0.27
HLA-F-222ENST00000462777 CIDEAO60543 219 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms