RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 GCSHP23434 173 aa9.34□□□□□ -0.91
COL4A6-204ENST00000461897 Q6ZQT7 251 aa9.34□□□□□ -0.91
COL4A6-204ENST00000461897 RAB37Q96AX2 223 aa9.34□□□□□ -0.91
COL4A6-204ENST00000461897 TOMM6Q96B49 74 aa9.34□□□□□ -0.91
COL4A6-204ENST00000461897 TTTY13Q9BZ97 58 aa9.34□□□□□ -0.91
COL4A6-204ENST00000461897 TMEM160Q9NX00 188 aa9.34□□□□□ -0.91
COL4A6-204ENST00000461897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-204ENST00000461897 H7C1H1 209 aa9.33□□□□□ -0.92
COL4A6-204ENST00000461897 LGALS1P09382 135 aaKnown RBP9.33□□□□□ -0.92
COL4A6-204ENST00000461897 TM4SF20Q53R12 229 aa9.33□□□□□ -0.92
COL4A6-204ENST00000461897 UBE2E2Q96LR5 201 aa9.33□□□□□ -0.92
COL4A6-204ENST00000461897 DAZ1Q9NQZ3 744 aaKnown RBP9.33□□□□□ -0.92
COL4A6-204ENST00000461897 SAP30O75446 220 aa9.32□□□□□ -0.92
COL4A6-204ENST00000461897 EDN2P20800 178 aa9.32□□□□□ -0.92
COL4A6-204ENST00000461897 SUMO2P61956 95 aaKnown RBP9.32□□□□□ -0.92
COL4A6-204ENST00000461897 RASL10AQ92737 203 aa9.32□□□□□ -0.92
COL4A6-204ENST00000461897 NAA38Q9BRA0 125 aaKnown RBP9.32□□□□□ -0.92
COL4A6-204ENST00000461897 CSTL1Q9H114 145 aa9.32□□□□□ -0.92
COL4A6-204ENST00000461897 DPH3P1Q9H4G8 78 aa9.32□□□□□ -0.92
COL4A6-204ENST00000461897 E9PLD3 99 aa9.32□□□□□ -0.92
COL4A6-204ENST00000461897 NXPH4O95158 308 aa9.32□□□□□ -0.92
COL4A6-204ENST00000461897 RPL32P62910 135 aaKnown RBP9.32□□□□□ -0.92
COL4A6-204ENST00000461897 MAPKAPK5-AS1Q8N8E1 139 aa9.32□□□□□ -0.92
COL4A6-204ENST00000461897 OR10J6PQ8NGY7 276 aa9.32□□□□□ -0.92
COL4A6-204ENST00000461897 IGHV4OR15-8A0A075B7B6 117 aa9.31□□□□□ -0.92
COL4A6-204ENST00000461897 A0A087WW49 117 aa9.31□□□□□ -0.92
COL4A6-204ENST00000461897 A0A1B0GWB2 263 aa9.31□□□□□ -0.92
COL4A6-204ENST00000461897 LY6G6DO95868 133 aa9.31□□□□□ -0.92
COL4A6-204ENST00000461897 PPP1R17O96001 155 aa9.31□□□□□ -0.92
COL4A6-204ENST00000461897 ASIPP42127 132 aa9.31□□□□□ -0.92
COL4A6-204ENST00000461897 TCTEX1D4Q5JR98 221 aa9.31□□□□□ -0.92
COL4A6-204ENST00000461897 NEXN-AS1Q8NBZ9 246 aa9.31□□□□□ -0.92
COL4A6-204ENST00000461897 TRBV7-3A0A075B6L6 115 aa9.3□□□□□ -0.92
COL4A6-204ENST00000461897 K7EMT4 169 aa9.3□□□□□ -0.92
COL4A6-204ENST00000461897 RNASE1P07998 156 aaKnown RBP9.3□□□□□ -0.92
COL4A6-204ENST00000461897 SRD5A1P18405 259 aa9.3□□□□□ -0.92
COL4A6-204ENST00000461897 C18orf65Q6ZTR6 163 aa9.3□□□□□ -0.92
COL4A6-204ENST00000461897 RHPN1-AS1Q9BWJ2 59 aa9.3□□□□□ -0.92
COL4A6-204ENST00000461897 HIVEP2P31629 2446 aa9.3□□□□□ -0.92
COL4A6-204ENST00000461897 SCGB2A2Q13296 93 aa9.3□□□□□ -0.92
COL4A6-204ENST00000461897 IGLL5B9A064 214 aa9.29□□□□□ -0.92
COL4A6-204ENST00000461897 SCGB3A1Q96QR1 104 aa9.29□□□□□ -0.92
COL4A6-204ENST00000461897 NHP2Q9NX24 153 aaKnown RBP9.29□□□□□ -0.92
COL4A6-204ENST00000461897 CHTOPQ9Y3Y2 248 aaKnown RBP9.29□□□□□ -0.92
COL4A6-204ENST00000461897 LINC01549A6NIU2 74 aa9.28□□□□□ -0.92
COL4A6-204ENST00000461897 K7ERJ3 54 aa9.28□□□□□ -0.92
COL4A6-204ENST00000461897 HOXD3P31249 432 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-204ENST00000461897 HILS1P60008 231 aa9.28□□□□□ -0.92
COL4A6-204ENST00000461897 DEFB136Q30KP8 78 aa9.28□□□□□ -0.92
COL4A6-204ENST00000461897 ANXA2RQ3ZCQ2 193 aa9.28□□□□□ -0.92
COL4A6-204ENST00000461897 SELENOKQ9Y6D0 94 aa9.28□□□□□ -0.92
COL4A6-204ENST00000461897 MYMXA0A1B0GTQ4 84 aa9.28□□□□□ -0.92
COL4A6-204ENST00000461897 RNASE3P12724 160 aaKnown RBP9.28□□□□□ -0.92
COL4A6-204ENST00000461897 SYNJ2BPP57105 145 aa9.28□□□□□ -0.92
COL4A6-204ENST00000461897 C12orf74Q32Q52 190 aa9.28□□□□□ -0.92
COL4A6-204ENST00000461897 HIST2H2BDQ6DRA6 164 aa9.28□□□□□ -0.92
COL4A6-204ENST00000461897 FOXI2Q6ZQN5 318 aa9.28□□□□□ -0.92
COL4A6-204ENST00000461897 ZNF418Q8TF45 676 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-204ENST00000461897 PHLDA3Q9Y5J5 127 aa9.28□□□□□ -0.92
COL4A6-204ENST00000461897 OR11H12B2RN74 326 aa9.27□□□□□ -0.93
COL4A6-204ENST00000461897 LGALS9O00182 355 aa9.27□□□□□ -0.93
COL4A6-204ENST00000461897 S100A4P26447 101 aaKnown RBP9.27□□□□□ -0.93
COL4A6-204ENST00000461897 LINC00315P59091 139 aa9.27□□□□□ -0.93
COL4A6-204ENST00000461897 C2orf66Q6UXQ4 117 aa9.27□□□□□ -0.93
COL4A6-204ENST00000461897 OR11H1Q8NG94 326 aa9.27□□□□□ -0.93
COL4A6-204ENST00000461897 OR11H2Q8NH07 326 aa9.27□□□□□ -0.93
COL4A6-204ENST00000461897 BAALCQ8WXS3 180 aa9.27□□□□□ -0.93
COL4A6-204ENST00000461897 RPL39LQ96EH5 51 aaKnown RBP9.27□□□□□ -0.93
COL4A6-204ENST00000461897 KIF25-AS1Q9Y6Z4 181 aa9.27□□□□□ -0.93
COL4A6-204ENST00000461897 HIVEP1P15822 2718 aa9.26□□□□□ -0.93
COL4A6-204ENST00000461897 KLLNB2CW77 178 aa9.26□□□□□ -0.93
COL4A6-204ENST00000461897 SAMD13Q5VXD3 122 aa9.26□□□□□ -0.93
COL4A6-204ENST00000461897 C14orf178Q8N769 122 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-204ENST00000461897 C4orf3Q8WVX3 66 aa9.26□□□□□ -0.93
COL4A6-204ENST00000461897 F8W1H4 67 aa9.25□□□□□ -0.93
COL4A6-204ENST00000461897 SLURP1P55000 103 aa9.25□□□□□ -0.93
COL4A6-204ENST00000461897 RPL11P62913 178 aaKnown RBP9.25□□□□□ -0.93
COL4A6-204ENST00000461897 KHDC1LQ5JSQ8 128 aa9.25□□□□□ -0.93
COL4A6-204ENST00000461897 LINC01006Q8NI28 216 aa9.25□□□□□ -0.93
COL4A6-204ENST00000461897 ZNF479Q96JC4 524 aa9.25□□□□□ -0.93
COL4A6-204ENST00000461897 C16orf95Q9H693 158 aa9.25□□□□□ -0.93
COL4A6-204ENST00000461897 NSD1Q96L73 2696 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-204ENST00000461897 IGKV3-7A0A075B6H7 116 aa9.25□□□□□ -0.93
COL4A6-204ENST00000461897 RNASE4P34096 147 aaKnown RBP9.25□□□□□ -0.93
COL4A6-204ENST00000461897 RRN3P1Q2M238 152 aa9.25□□□□□ -0.93
COL4A6-204ENST00000461897 HIST1H4GQ99525 98 aa9.25□□□□□ -0.93
COL4A6-204ENST00000461897 PRSS29PA6NIE9 313 aa9.24□□□□□ -0.93
COL4A6-204ENST00000461897 KLHL30-AS1Q8NEE0 82 aa9.24□□□□□ -0.93
COL4A6-204ENST00000461897 DUX3Q96PT4 197 aa9.24□□□□□ -0.93
COL4A6-204ENST00000461897 INAFM1C9JVW0 142 aa9.23□□□□□ -0.93
COL4A6-204ENST00000461897 POLR2KP53803 58 aaKnown RBP9.23□□□□□ -0.93
COL4A6-204ENST00000461897 DCANP1Q8TF63 244 aa9.23□□□□□ -0.93
COL4A6-204ENST00000461897 AGRNO00468 2067 aa9.23□□□□□ -0.93
COL4A6-204ENST00000461897 J3KRW8 73 aa9.23□□□□□ -0.93
COL4A6-204ENST00000461897 GNRH2O43555 120 aa9.23□□□□□ -0.93
COL4A6-204ENST00000461897 CD28P10747 220 aa9.23□□□□□ -0.93
COL4A6-204ENST00000461897 DEFB1P60022 68 aa9.23□□□□□ -0.93
COL4A6-204ENST00000461897 PAPPA-AS1Q5QFB9 102 aa9.23□□□□□ -0.93
COL4A6-204ENST00000461897 C11orf44Q8N8P7 122 aa9.23□□□□□ -0.93
COL4A6-204ENST00000461897 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms