RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 BCL2L11O43521 198 aa12.68□□□□□ -0.38
VARS-220ENST00000461874 SFRP2Q96HF1 295 aa12.68□□□□□ -0.38
VARS-220ENST00000461874 Q9HAA7 133 aa12.68□□□□□ -0.38
VARS-220ENST00000461874 A0A1B0GV50 99 aa12.67□□□□□ -0.38
VARS-220ENST00000461874 KANTRA0A1W2PQU2 76 aa12.67□□□□□ -0.38
VARS-220ENST00000461874 S100A9P06702 114 aaKnown RBP12.67□□□□□ -0.38
VARS-220ENST00000461874 TPT1P13693 172 aaKnown RBP12.67□□□□□ -0.38
VARS-220ENST00000461874 XGP55808 180 aa12.67□□□□□ -0.38
VARS-220ENST00000461874 A0A087WWL8 130 aa12.66□□□□□ -0.38
VARS-220ENST00000461874 LAGE3Q14657 143 aa12.66□□□□□ -0.38
VARS-220ENST00000461874 FAM74A4Q5TZK3 123 aa12.66□□□□□ -0.38
VARS-220ENST00000461874 Q8N3U1 123 aa12.66□□□□□ -0.38
VARS-220ENST00000461874 A0A087WWC5 75 aa12.65□□□□□ -0.38
VARS-220ENST00000461874 SCO2A0A1W2PP80 73 aa12.65□□□□□ -0.38
VARS-220ENST00000461874 M0R381 172 aa12.65□□□□□ -0.38
VARS-220ENST00000461874 GCSHP23434 173 aa12.65□□□□□ -0.38
VARS-220ENST00000461874 EIF5AP63241 154 aaKnown RBP12.65□□□□□ -0.38
VARS-220ENST00000461874 ZFP82Q8N141 532 aa12.65□□□□□ -0.38
VARS-220ENST00000461874 PFDN1O60925 122 aa12.64□□□□□ -0.39
VARS-220ENST00000461874 H2AFB1P0C5Y9 115 aa12.64□□□□□ -0.39
VARS-220ENST00000461874 BAGE2Q86Y30 109 aa12.64□□□□□ -0.39
VARS-220ENST00000461874 MLST8Q9BVC4 326 aa12.64□□□□□ -0.39
VARS-220ENST00000461874 TMUB2Q71RG4 321 aa12.63□□□□□ -0.39
VARS-220ENST00000461874 NTN5Q8WTR8 489 aaPredicted RBP12.63□□□□□ -0.39
VARS-220ENST00000461874 IGLV5-52A0A0A0MRZ9 124 aa12.62□□□□□ -0.39
VARS-220ENST00000461874 Q8N814 137 aa12.62□□□□□ -0.39
VARS-220ENST00000461874 TM2D2Q9BX73 214 aa12.62□□□□□ -0.39
VARS-220ENST00000461874 EPM2AB3EWF7 344 aa12.61□□□□□ -0.39
VARS-220ENST00000461874 CXCL1P09341 107 aa12.61□□□□□ -0.39
VARS-220ENST00000461874 RPL19P84098 196 aaKnown RBP12.61□□□□□ -0.39
VARS-220ENST00000461874 DAZ4Q86SG3 579 aaKnown RBP12.61□□□□□ -0.39
VARS-220ENST00000461874 DAZ3Q9NR90 486 aaKnown RBP12.61□□□□□ -0.39
VARS-220ENST00000461874 FAT1Q14517 4588 aa12.61□□□□□ -0.39
VARS-220ENST00000461874 TRAV8-3A0A0A6YYJ7 113 aa12.6□□□□□ -0.39
VARS-220ENST00000461874 TRBV10-1A0A0K0K1A3 114 aa12.6□□□□□ -0.39
VARS-220ENST00000461874 CCL20P78556 96 aa12.59□□□□□ -0.39
VARS-220ENST00000461874 TOR2AQ5JU69 321 aa12.59□□□□□ -0.39
VARS-220ENST00000461874 OR10AG1Q8NH19 301 aa12.59□□□□□ -0.39
VARS-220ENST00000461874 TRAV1-1A0A0B4J248 108 aa12.58□□□□□ -0.4
VARS-220ENST00000461874 RPL36AP83881 106 aaKnown RBP12.58□□□□□ -0.4
VARS-220ENST00000461874 NIT1Q86X76 327 aa12.58□□□□□ -0.4
VARS-220ENST00000461874 RPL36ALQ969Q0 106 aaKnown RBP12.58□□□□□ -0.4
VARS-220ENST00000461874 SSBP4Q9BWG4 385 aaPredicted RBP12.58□□□□□ -0.4
VARS-220ENST00000461874 TRBV7-3A0A075B6L6 115 aa12.57□□□□□ -0.4
VARS-220ENST00000461874 SNAI2O43623 268 aa12.57□□□□□ -0.4
VARS-220ENST00000461874 RPL35P42766 123 aaKnown RBP12.57□□□□□ -0.4
VARS-220ENST00000461874 RAB4BP61018 213 aa12.57□□□□□ -0.4
VARS-220ENST00000461874 UBE2D3P61077 147 aa12.57□□□□□ -0.4
VARS-220ENST00000461874 UBE2D2P62837 147 aa12.57□□□□□ -0.4
VARS-220ENST00000461874 WFDC2Q14508 124 aa12.57□□□□□ -0.4
VARS-220ENST00000461874 OR10G8Q8NGN5 311 aa12.57□□□□□ -0.4
VARS-220ENST00000461874 MANBALQ9NQG1 85 aa12.57□□□□□ -0.4
VARS-220ENST00000461874 GNG13Q9P2W3 67 aa12.57□□□□□ -0.4
VARS-220ENST00000461874 URGCP-MRPS24S4R325 110 aa12.57□□□□□ -0.4
VARS-220ENST00000461874 OR5AL1P0C617 328 aa12.56□□□□□ -0.4
VARS-220ENST00000461874 RAB5CP51148 216 aa12.56□□□□□ -0.4
VARS-220ENST00000461874 PRR27Q6MZM9 219 aa12.56□□□□□ -0.4
VARS-220ENST00000461874 C11orf52Q96A22 123 aa12.56□□□□□ -0.4
VARS-220ENST00000461874 MUC21A0A0G2JKD1 596 aa12.55□□□□□ -0.4
VARS-220ENST00000461874 MUC21A0A140T8X8 626 aa12.55□□□□□ -0.4
VARS-220ENST00000461874 TMEM70Q9BUB7 260 aa12.55□□□□□ -0.4
VARS-220ENST00000461874 DERL1Q9BUN8 251 aa12.55□□□□□ -0.4
VARS-220ENST00000461874 COX11Q9Y6N1 276 aa12.55□□□□□ -0.4
VARS-220ENST00000461874 SPANXN1Q5VSR9 72 aa12.54□□□□□ -0.4
VARS-220ENST00000461874 EIF5AL1Q6IS14 154 aaKnown RBP12.54□□□□□ -0.4
VARS-220ENST00000461874 CHCHD7Q9BUK0 85 aa12.54□□□□□ -0.4
VARS-220ENST00000461874 VPS13BQ7Z7G8 4022 aa12.53□□□□□ -0.4
VARS-220ENST00000461874 ZNF56Q15929 161 aa12.53□□□□□ -0.4
VARS-220ENST00000461874 Q5VSD8 79 aa12.53□□□□□ -0.4
VARS-220ENST00000461874 NEXN-AS1Q8NBZ9 246 aa12.53□□□□□ -0.4
VARS-220ENST00000461874 FRZBQ92765 325 aa12.53□□□□□ -0.4
VARS-220ENST00000461874 RMI2Q96E14 147 aa12.53□□□□□ -0.4
VARS-220ENST00000461874 KLK12Q9UKR0 248 aa12.53□□□□□ -0.4
VARS-220ENST00000461874 A0A087WX48 190 aa12.52□□□□□ -0.41
VARS-220ENST00000461874 LECT2O14960 151 aa12.52□□□□□ -0.41
VARS-220ENST00000461874 SMR3BP02814 79 aaPredicted RBP12.52□□□□□ -0.41
VARS-220ENST00000461874 SULT1A2P50226 295 aa12.52□□□□□ -0.41
VARS-220ENST00000461874 HAMPP81172 84 aa12.52□□□□□ -0.41
VARS-220ENST00000461874 DNAJC30Q96LL9 226 aa12.52□□□□□ -0.41
VARS-220ENST00000461874 DNAH8Q96JB1 4490 aa12.52□□□□□ -0.41
VARS-220ENST00000461874 TEX46H3BTG2 121 aa12.51□□□□□ -0.41
VARS-220ENST00000461874 IGLV2-8P01709 118 aa12.51□□□□□ -0.41
VARS-220ENST00000461874 C1QBP02746 253 aa12.51□□□□□ -0.41
VARS-220ENST00000461874 SSTP61278 116 aa12.51□□□□□ -0.41
VARS-220ENST00000461874 ELOBQ15370 118 aa12.51□□□□□ -0.41
VARS-220ENST00000461874 CENPWQ5EE01 88 aa12.51□□□□□ -0.41
VARS-220ENST00000461874 TCTE3Q8IZS6 198 aa12.51□□□□□ -0.41
VARS-220ENST00000461874 BAALCQ8WXS3 180 aa12.51□□□□□ -0.41
VARS-220ENST00000461874 TRBV6-8A0A0A6YYG3 113 aa12.5□□□□□ -0.41
VARS-220ENST00000461874 F5H697 171 aa12.5□□□□□ -0.41
VARS-220ENST00000461874 INAFM2P0DMQ5 153 aa12.5□□□□□ -0.41
VARS-220ENST00000461874 KCNIP4Q6PIL6 250 aa12.5□□□□□ -0.41
VARS-220ENST00000461874 UBE2WQ96B02 151 aa12.5□□□□□ -0.41
VARS-220ENST00000461874 FAM30AQ9NZY2 134 aa12.5□□□□□ -0.41
VARS-220ENST00000461874 KIF25-AS1Q9Y6Z4 181 aa12.5□□□□□ -0.41
VARS-220ENST00000461874 IGKV2D-24A0A075B6R9 120 aa12.49□□□□□ -0.41
VARS-220ENST00000461874 RAB19A4D1S5 217 aa12.49□□□□□ -0.41
VARS-220ENST00000461874 TMEM262E9PQX1 116 aa12.48□□□□□ -0.41
VARS-220ENST00000461874 IGLC6P0CF74 106 aa12.48□□□□□ -0.41
VARS-220ENST00000461874 SMIM17P0DL12 118 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms